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6 protocols using lambda 10 3 filter wheel

1

TIRF Microscopy for Imaging Cellular Dynamics

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TIRF microscopy was conducted using an Olympus IX81 motorized inverted microscope (Olympus) as described previously (42 ), using 447, 514, and 568 nm lasers for excitation of CFP, YFP, and Cherry, respectively; a TIRF-optimized Olympus Plan APO 60x (1.45 NA) oil immersion objective; and Lambda 10-3 filter wheel (Sutter Instruments, Novato, CA) containing 480-band pass (BP 40m), 525-band pass (BP 50m), and 605-band pass (BP 52m) filters for emission. Images were collected using a Q-Imaging Rolera e-mc2 camera (Photometrics, Tucson, AZ) and the MetaMorph imaging software (Molecular Devices). MetaMorph was also used to measure the linescans and fluorescence intensities of puncta before and after stimulation with CCh. These values were then plotted using the Origin 8.6 software (OriginLab, Northampton, MA). Confocal microscopy was conducted using the FluoView FV1000 confocal scanning microscope system (Olympus). The images shown in the figures were of cells stimulated with the indicated [CCh] or [Tg] for 5-8 min in a Ca2+-containing SES.
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2

Imaging Synechococcus sp. PCC 7002 Fluorescence

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An Olympus IX71 confocal fluorescence microscope with a 60×/1.42 oil objective was used to analyze the fluorescent protein expressing strains of Synechococcus sp. PCC 7002. The culture samples (1.5 mL) were centrifuged at 5000×g for 5 min, and the cell pellets were resuspended in approximately 50 µL of supernatant to concentrate the culture. A 10 µL aliquot of each culture was placed on a glass microscope slide, covered with a no. 1.0 cover slip, and sealed with nail polish. A Prior Scientific Lumen 200PRO fluorescence illumination system with a Sutter Instrument Lambda 10-3 filter wheel was used to excite the samples. The Chroma Chl LP filter cube (Em > 600 nm) with 484 nm excitation was used to detect chlorophyll-a (Chl-a) fluorescence; the Semrock GFP-3035B-OMF-ZERO (Em 520/35 nm) filter cube with 484 or 500 nm excitation was used to detect hGFP and Ypet, respectively; and the Olympus DSU-MRFPHQ (Em 597.5/55 nm) filter cube with 534 nm excitation was used to detect mOrange. SlideBook 6 software was used for image acquisition. The images were imported into ImageJ [37 ], upon which Chl-a fluorescence was colored red; fluorescent protein fluorescence was colored green; and scale bars were added.
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3

Inverted Microscopy for Fluorescence Imaging

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The microscope was similar to the one that was previously used14 (link). An IX70 inverted microscope with a PlanApo N 60×/1.45 oil objective lens (Olympus, Tokyo, Japan) was mounted on an optical bench. A mercury lamp and Lambda 10-3 filter wheel (Sutter Instrument, CA, USA) were set outside the bench and connected to the microscope via a liquid light guide. To prevent excessive bleaching of the fluorescence signal, neutral density filters were placed in front of a liquid light guide. Fluorescence images were recorded with BP360-370, DM505, and BA515IF (respectively, excitation filter, dichroic mirror, and emission filter) for thermometer sheet; BP470-490, DM505, and BA515IF (a green channel) for Ca2+ dynamics; BP520-550, FF562-Di02, and BA580IF (a red channel) for injection marker, respectively (FF562-Di02, Semrock, NY, USA; others, Olympus). For bright field and fluorescence imaging, an iXon EM+ 897 electron multiplying charge-coupled device camera shooting an average of 9.9 frames/s and Andor iQ software (Andor Technology, Antrim, UK) were used along with an FF01-790 short-pass filter (Semrock) placed in front of the camera.
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4

Microscopy Analysis of Intracellular Dynamics

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An Olympus IX81 motorized inverted microscope (Olympus) was used as described previously [34 (link)] using 447, 514 and 568 nm lasers for excitation of CFP, YFP and mCherry respectively, a TIRF-optimized Olympus Plan APO ×60 [1.45 NA (numerical aperture)] oil immersion objective and Lambda 10-3 filter wheel (Sutter Instruments) containing 480/40m, 525/50m and 605/52m band pass filters for emission. There is negligible bleed-through associated with these filters at the wavelengths used. Images were collected using a QImaging Rolera EM-C2 camera and MetaMorph imaging software (Molecular Devices). MetaMorph was also used to measure line scans and the fluorescence intensities of selected ROIs (regions of interest) before and after cell stimulation with Tg (thapsigargin). These values taken from TIRF images were then plotted and analysed using Origin 8 software (OriginLab). Experimental values are expressed as means±S.E.M., with statistical comparisons made using the Student’s t test. Differences in the mean values were considered to be significant at P < 0.01.
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5

TIRF Imaging of HEK293 Cells

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HEK293 cells were plated on collagen-coated glass-bottomed tissue culture dishes (MatTek Corporation, Ashland, MA), transfected as required and used 24 h later. TIRF imaging was performed using an Olympus IX81 motorized inverted microscope (Olympus, Center Valley, PA) with a TIRF-optimized Olympus Plan APO 60× (1.45 NA) oil immersion objective and Lambda 10-3 filter wheel (Sutter Instruments, Novato, CA, USA) containing 480-band pass (BP 40 m) and 540-band pass (BP 30 m) emission filters (Chroma Technology, Bellows Falls, VT). Images were collected using a Hamamatsu ORCA-Flash4.0 camera (Olympus) and the MetaMorph imaging software (Molecular Devices, Downingtown, PA).
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6

TIRF Microscopy Analysis of Protein Clustering

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TIRF microscopy was performed using an Olympus IX81 motorized inverted microscope (Olympus, Waltham, MA, USA) with a TIRF-optimized Olympus Plan APO 60×/1.45 oil immersion objective and Lambda 10–3 filter wheel (Sutter Instruments, Novato, CA, USA) containing 480/40, 540/30, and 575lp emission filters (Chroma Technology), as described previously [29 (link)]. CFP, YFP, and mCherry were excited by 445-, 514-, and 561-nm lasers, respectively, via cell^TIRF Control 1.3 software. Images were collected every 5 s using an ORCA-Flash4.0 camera (Hamamatsu, Bridgewater, NJ, USA) and MetaMorph software (Molecular Devices, San Jose, CA, USA). Cells plated on poly-l-lysine–coated glass-bottom dishes (MatTek Corporation, Ashland, MA, USA) were perfused with indicated solutions at 37°C during image acquisition. The size, distribution, and rate of clustering of proteins were analyzed using ImageJ 1.51n.
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