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10 protocols using rabbit anti mouse igg hrp

1

Western Blot Analysis of Cre Induction

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Western blot analysis was performed on fully-confluent Cre-responsive cell lines harvested from 24-well plates 6 or 22 hours after the single administration of PTD-Cre (15 nM) or syn-mRNA-Cre (2.1 nM). The cells were lysed using RIPA buffer composed of 150 mM NaCl, 1% IGEPAL CA-630, 0.5% sodium deoxycholate, 0.1% SDS, and 50 mM Tris, pH 8.0 [27 (link)]. Cell lysates (14 μg total protein per well) were mixed with 4x Laemmli loading buffer containing 8% SDS, 40% glycerol, 0.02% bromophenol blue, 250 mM Tris, and 20% 2-mercaptoethanol (all from Sigma-Aldrich), pH 6.8, heated at 95°C for 3 min, and run on a 15% polyacrylamide gel and transferred to PVDF membranes (Merck Millipore) using a Pierce G2 electroblotter (Thermo Fisher Scientific). The membranes were blocked with 3% BSA (Sigma-Aldrich). Primary antibodies included a rabbit anti-T7 antibody (Abcam, Cambridge, UK) for detecting Cre recombinase (1:2000 dilution) and a mouse anti-beta-actin antibody (Sigma-Aldrich) as a loading control (1:7500 dilution). The secondary antibodies included goat anti-rabbit IgG-HRP (Merck Millipore) and rabbit anti-Mouse IgG-HRP (Thermo Fisher Scientific), each diluted 1:50000. Chemiluminescent SuperSignal West Dura Extended Duration Substrate (Thermo Fisher Scientific) was used for detection. The signals were acquired using a G:BOX Chemi XR5 (Syngene, Cambridge, UK).
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2

Western Blot Analysis of Na⁺V1.5 Channel Expression

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HEK293T cells that heterologously expressed WT or mutant NaV1.5 channels were lysed and samples of equal total protein amount (standard BCA-assay) were run on 10% SDS-PAGE. The electrophoresed proteins were transferred to nitrocellulose-membrane (#RPN303D, Amersham Hybond ECL, GE Healthcare Europe). Subsequently, the membrane was cut between the 75 kDa and 50 kDa band (Precision Plus Protein dual color marker #161-0374, BIO-RAD). The section with proteins of higher molecular weight (≥75 kDa) was incubated with a primary rabbit anti-NaV1.5 antibody (ASC-005, alomone Labs, 1:1000 in 1x TBST with 1% BSA), whereas the other membrane section (≤50 kDa) received a mouse anti-GAPDH antibody (A-3, sc-137179, Santa Cruz Biotechnology, 1:4000 in 1x TBST with 1% BSA). Goat anti-rabbit IgG HRP (#31463, Thermo Fisher, 1:20000 in 1xTBST with 1% BSA) or rabbit anti-mouse IgG HRP (#31455, Thermo Fisher; 1:25000 in 1x TBST with 1% BSA) were used as secondary antibody to visualize NaV1.5 and GAPDH by Super SignalTM West Pico/Femto Luminol (Thermo Fisher) and Fusion imaging system (Vilber Lourmat).
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3

Western Blot Analysis of ADA2 and ACTN

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Cells were lysed in RIPA buffer (Thermo Fisher Scientific, Waltham, Mass) with 1% proteinase inhibitors (Roche Diagnostics). Lysates were boiled in the presence of 2 X Laemmli Buffer. Protein concentrations were measured using Pierce BCA Protein Assay (Thermo Fisher Scientific, UK). A total of 20 μg total protein was subjected to SDS-PAGE analysis and electro transferred onto polyvinylidene difluoride membranes (Millipore, Temecula, Calif). Membranes were blocked with milk, probed with primary and secondary antibodies, and visualized with the enhanced chemiluminescence detection system (Amersham Pharmacia Biotech, Little Chalfont, United Kingdom). The following antibodies were used: ADA2 (ab154619, Abcam), ACTN (MAB 1501R; Merck Millipore, Burlington, Mass), Goat anti-Rabbit IgG, HRP (ThermoFisher) and Rabbit anti-mouse IgG, HRP (ThermoFisher).
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4

Western Blot Analysis of Protein Lysates

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Cells were lysed in RIPA lysis buffer. Protein lysates were centrifuge at 14,000g for 20 mins at 4 °C. Protein concentration was determined using the Pierce™ BCA Protein Assay Kit (Pierce Biotechnology, USA). Protein lysates were resolved by SDS-PAGE and transferred onto PVDF membranes. The membranes were blocked with 5% skim milk or BSA in 1xTBS (1M Tris HCl pH 7.4, 5M NaCl) for 1 h at room temperature. Membranes were subsequently incubated with primary antibodies overnight at 4 °C. After washing, the secondary goat anti-Rabbit IgG-HRP (G21234; Invitrogen, USA) or rabbit anti-Mouse IgG-HRP (A16166; Thermo Fisher Scientific, USA) was used. The immunoreactive signals were visualized using Amersham™ ECL™ Prime Western Blotting Detection Reagent (GE Healthcare, UK).
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5

Western Blot Protein Analysis Protocol

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Protein samples were resolved by SDS-PAGE using Mini-Protean TGX 4–15% Tris-Glycine gels (BioRad) and transferred to a polyvinylidene difluoride (PVDF) membrane (BioRad). After transfer, the PVDF membrane was blocked with 3% BSA in TBST for 1 hour at room temperature. The membrane was washed with TBST (3X) and immunoblotting was performed with the following primary and secondary antibodies at the indicated dilutions: PTP-S-DMD AB (1:200 – 1:1000), SHP2 (Santa Cruz Biotechnology; 1:200), goat anti-rabbit IgG-HRP (Calbiochem, 1:1000 – 1:50000), and rabbit anti-mouse IgG-HRP (Invitrogen, 1:35000) The PVDF membranes were washed with TBST (3X) and developed with ECL Plus chemiluminescence (Pierce) and imaged by film. Equal loading of recombinant phosphatases were assessed by treating the membrane with a solution of 1:1 MeOH:R-250 Coomassie blue for ten minutes, then allowing membrane to dry.
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6

Western Blot Antibody Panel for Protein Analysis

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HRP-streptavidin (GE Healthcare, RPN1231, 1:80,000), His-tag (Cell Signaling Technologies, 2365, 1:1,000), anti-Actin (Santa Cruz Biotechnology, sc-1616 1:1,000), anti-PARK7/DJ-1 (Abcam, ab18257 1:1,000 or Proteintech, 11681–1-AP, 1:500), anti-oxDJ-1 (Millipore, MABN1773, 1:500), anti-PTPN12 (Invitrogen, MA1–12377, 1:2,000), anti-SRX (Santa Cruz Biotechnology, sc-166786, 1:100); anti-NDUFS1 (Abcam, ab169540, 1:5,000); anti-V5 (Invitrogen, R960–25, 1:1,000), anti-HA (Invitrogen, 71–5500, 1:1,000), anti-GAPDH (Abnova, H00002597-M01, 1:1000), anti-PRDX1 (Abnova, MAB7559, 1:1,000), anti-PRDX2 (Abnova, H00007001-M01, 1:200), rabbit anti-goat IgG-HRP (Invitrogen, 31402, 1:20,000 – 1:50,000), and rabbit anti-mouse IgG-HRP (Invitrogen, 61–6520, 1:20,000 – 1:50,000).
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7

Western Blot Antibody Panel for Protein Analysis

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HRP-streptavidin (GE Healthcare, RPN1231, 1:80,000), His-tag (Cell Signaling Technologies, 2365, 1:1,000), anti-Actin (Santa Cruz Biotechnology, sc-1616 1:1,000), anti-PARK7/DJ-1 (Abcam, ab18257 1:1,000 or Proteintech, 11681–1-AP, 1:500), anti-oxDJ-1 (Millipore, MABN1773, 1:500), anti-PTPN12 (Invitrogen, MA1–12377, 1:2,000), anti-SRX (Santa Cruz Biotechnology, sc-166786, 1:100); anti-NDUFS1 (Abcam, ab169540, 1:5,000); anti-V5 (Invitrogen, R960–25, 1:1,000), anti-HA (Invitrogen, 71–5500, 1:1,000), anti-GAPDH (Abnova, H00002597-M01, 1:1000), anti-PRDX1 (Abnova, MAB7559, 1:1,000), anti-PRDX2 (Abnova, H00007001-M01, 1:200), rabbit anti-goat IgG-HRP (Invitrogen, 31402, 1:20,000 – 1:50,000), and rabbit anti-mouse IgG-HRP (Invitrogen, 61–6520, 1:20,000 – 1:50,000).
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8

Immunoblotting for Oxidized PARK7/DJ-1

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Protein samples were resolved by SDS-PAGE using Mini-Protean TGX 4–15% Tris-Glycine gels (BioRad) and transferred to a polyvinylidene difluoride (PVDF) membrane (BioRad). After transfer, the PVDF membrane was blocked with 5% BSA in TBST for 1 hour at room temperature. The membrane was washed with TBST (3X) and immunoblotting was performed with the following primary and secondary antibodies at the indicated dilutions: HRP-streptavidin (GE Healthcare, 1:80000), Actin (Santa Cruz Biotechnology, 1:1000), PARK7/DJ-1 (Abcam, 1:1000), oxidized PARK7/DJ-1 (Abcam, 1:1000), rabbit anti-goat IgG-HRP (Invitrogen, 1:2000 – 1:50000), and rabbit anti-mouse IgG-HRP (Invitrogen, 1:20000 – 1:50000). The PVDF membranes were washed with TBST (3X) and developed with ECL Plus chemiluminescence (Pierce) and imaged by film.
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9

Immunoblot Analysis of Mitochondrial OXPHOS

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Preparation of tissue lysate was carried out as described previously [93 (link)]. From this, 10 μg protein was loaded into 4–20% gradient gels (Mini-PROTEAN® TGX™ Precast Protein Gels, 15-well, 15 μl #4561096, BioRAD) alongside a protein ladder (Precision plus protein dual color standards #1610374, BioRAD). The gel was transferred to nitrocellulose membrane, and this was stained in Ponceau S. The membrane was blocked in 5% Skimmed milk-TBS-T for 1 h prior to primary antibody incubation (Total OXPHOS antibody cocktail, ab110412, Abcam, RRID:AB_2847807; 1:500 in 1% Milk TBS-T) overnight at 4 °C. The membrane was incubated with secondary antibody (Rabbit anti-Mouse IgG HRP, #61-6520, Invitrogen; RRID:AB_2533933 1:5000 in TBS-T)) for 1 h at room temperature, before ECL detection (Milipore) and imaging using iBright 1500 (ThermoFisher Scientific). Band density was quantified using Image J software [92 (link)]. The original immunoblot image is presented in Additional File 1: Figure S8H.
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10

Quantitative ELISA Assay for Analyte

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100 μL of the neutralized reaction samples were transferred to a streptavidin-coated 96-well microtiter plate (Pierce™ Streptavidin Coated High Capacity) and incubated at rt for 1 h. After the incubation, the samples were removed followed by washing of the wells (3 × 300 μL 1 × PBS). 200 μL blocking buffer (2 w/v % skimmed milk protein (Premier Foods) in 1 × PBS (2% MPBS)) was added and allowed to incubate for 1 h at rt or overnight at 4 °C. This blocking buffer was removed followed by a washing step (3 × 300 μL 1 × PBS). 1.0 μg/mL product-specific antibody MGAb (in 2% MPBS) was then added and allowed to incubate for 2 h at rt. After a washing step (3 × 300 μL 1 × PBS), 100 μL polyclonal rabbit anti-mouse IgG-HRP diluted 1:4000 (Invitrogen) in 2% MPBS was added. The plate was incubated at rt for 1 h. Washing with 1 × PBS (3 × 300 μL) primed the plate for the addition of 100 μL TMB single solution (Life Technologies). The TMB solution was allowed to react for 5–15 min in complete darkness by covering with tinfoil. In order to quench the reaction, 50 μL 1 M H2SO4 was added, and the plate was analyzed within 10 min of the acid addition at OD450 subtracting OD655 (EnVision® plate reader).
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