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Bioscience cytofix cytoperm kit

Manufactured by BD

The BD Bioscience Cytofix/Cytoperm kit is a laboratory product designed for the fixation and permeabilization of cells. It is used to prepare cells for intracellular staining and flow cytometry analysis.

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3 protocols using bioscience cytofix cytoperm kit

1

Vaccine-specific T-cell Phenotyping

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To determine by flow cytometry the phenotype and cytokine profiles of vaccine-specific CD4+ and CD8+ T-cells 12 days after in vitro stimulation (IVS), patient PBMCs were re-challenged with individual peptides overnight at 37 °C, 5%CO2 in presence of Brefeldin A (51-2301KZ, BD Bioscience). The next day, the cells were washed with PBS and stained for 20 min on ice with anti-CD3 (clone SK7; # 344840, Biolegend), anti-CD8 (clone RPA-T8; #301042, Biolegend), anti-CD4 (clone RPA-T4; #558116, BD Biosciences), and a viability dye Zombie UV (#77474, Biolegend). After fixation and permeabilization for 20 min at 4 °C (BD Bioscience Cytofix/Cytoperm Kit), anti-CD154 (CD40-L, clone 24–31; #310826, Biolegend), anti-Granzyme B (clone GB11; #GRB17, Invitrogen), anti-Perforin (clone B-D48; #353310, Biolegend), anti-IL-2 (clone MQ1-17H12; #559334, BD Biosciences), anti-TNF-α (clone MAb11; #557647, BD Biosciences), and anti-IFN-γ (clone B27; #554702, BD Biosciences). All samples were acquired on a 5-laser BD FORTESSA instrument equipped with the FACS DiVa software. Analyses were performed with FlowJo v10.5 (FLOWJ,.LLC, Ashland, OR, USA) and SPICE 6 software.
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2

Single-cell flow cytometry protocol

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Single-cell suspensions were obtained and stained, as previously described (26 (link)). All the flow cytometric plots presented in this article were pre-gated on live (using Live/Dead stain) and singlet events. Intracellular transcription factor staining was performed with the BD Bioscience Cytofix/Cytoperm kit (BD Biosciences, San Jose, CA), according to the manufacturer's instructions. Samples were analyzed on a LSRFortessa flow cytometer (BD Biosciences). Data were analyzed with FlowJo software (TreeStar; Ashland, OR).
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3

Detailed Immune Cell Isolation Protocol

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Single cell suspensions were obtained as previously described (Kashem et al., 2015a (link)). After doublet and live/dead exclusion, cells were gated as follows: dermal γδ T cells, CD45+ CD3+ TCRγδmid; CD4 T cells, CD45+ CD3+ TCRαβ+ CD4+ CD8; DETC, CD45+ CD3+ TCRγδhigh; CD8 T cells, CD45+ CD3+ TCRαβ+ CD4 CD8+; innate lymphoid cells, CD45+ CD90.2+ Lin (B220, CD11c, CD11b, F4/80) CD3; neutrophils, CD45+ CD11b+ Gr-1high; endothelial cells, CD45CD31+; Dendritic Cell, CD45+MHCII+CD11c+; Macrophage, CD45+MHCII+CD64+. Intracellular cytokine staining was performed using BD Bioscience Cytofix/Cytoperm kit (BD Biosciences, San Jose, CA). Samples were analyzed on LSRFortessa flow cytometers (Becton Dickinson, Franklin Lakes, NJ). Data were analyzed using FlowJo software (TreeStar, Ashland, OR). For evaluation of cytokine production, cells were stimulated with PMA (50 ng/ml) and ionomycin (1.5 μM; Sigma-Aldrich, St. Louis, MO), supplemented with GolgiStop (BD PharMingen, San Jose, CA) in RPMI 1640 containing penicillin, streptomycin, 10% FBS, glutamine, nonessential amino acids, and 50 μM of β-mercaptoethanol for 4 hours at 37°3 and 5% CO2. For extracellular staining, antibodies were diluted in staining media (3% Calf Serum, 5mM EDTA, 0.04% Azide).
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