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5 protocols using reference ultrapure water system

1

Metabolic Profiling of LPS-Induced Inflammation

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LPS (Escherichia coli 055: B5), methoxyamine hydrochloride, fatty acid methyl esters (C7-C30, FAMEs), anhydrous pyridine, and anhydrous sodium sulfate were purchased from Sigma-Aldrich (St. Louis, MO, USA). PBS, the derivatization reagent N-methyl-N-(trimethylsilyl) trifluoroacetamide (MSTFA; containing 1% chlorotrimethylsilane (TMCS)), methanol (Optima; LC-MS grade), and n-ethane were purchased from Thermo Fisher (Fair Lawn, NJ, USA). Dichloromethane, chloroform, and acetone were purchased from the China National Pharmaceutical Group Corporation. An AXSYM automatic immunoassay analyser for liver and kidney function tests was purchased from Abbott Laboratories, Illinois, USA. Ultrapure water was obtained from a Millipore Reference ultrapure water system (Billerica, MA, USA) equipped with a liquid chromatography-coupled 0.22 μm filter. A GC-TOFMS system was purchased from LECO Corp. (St. Joseph, MI, USA).
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2

Reagents and Materials for Analytical Methods

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Choline chloride (99%), ethylene glycol (99.5%), urea (99.5%) and Triton X-10 were purchased from Acros Organics NV (Geel, Belgium). Levulinic acid (99%) was purchased from J&K Scientific BVBA (Pforzheim, Germany). Tetrabutylammonim chloride (97 wt%) was purchased from Sigma Aldrich (Steinheim, Germany). Tetrabutylphosphonium chloride (>95 wt%) was obtained from Io-Li-Tec (Heilbronn, Germany). Nitric acid, HNO3, (>65%) and anhydrous calcium chloride, CaCl2, (>95%) were purchased from Chem-Lab NV (Zedelgem, Belgium). Hydrochloric acid, HCl, (>37%) was purchased from VWR (Fontenay-sous-Bois, France). A silicon solution in isopropanol was purchased from SERVA Electrophoresis GmbH (Heidelberg, Germany). The standard solutions (1000 μg mL−1) of zinc, iron, copper, lead, calcium, arsenic, lutetium, niobium and platinum were purchased from Chem-Lab (Zedelgem, Belgium). Water was always of ultrapure quality, deionized to a resistivity of 18.2 MΩ cm with a Millipore Reference+ ultrapure water system. All chemicals were used as received without any further purification. The goethite residue was kindly provided by Nyrstar (Balen, Belgium).
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3

Untargeted Metabolomic Analysis by GC-TOF/MS

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High-purity methoxyamine hydrochloride, fatty acid methyl ester (C7–C30, FAME), anhydrous pyridine (99.5%), and anhydrous sodium sulfate were obtained from Sigma–Aldrich (MO, USA). Derivatization reagents MSTFA (containing 1% TMCS), methanol (Optima LC-MS), and n-hexane were purchased from Thermo Fisher (NJ, USA). Dichloromethane (99.5%), chloroform (99%), and acetone (99.5%) were purchased from China National Pharmaceutical Group Corporation (Beijing, China). Ultrapure water was prepared from a Millipore Reference ultrapure water system (MA, USA) equipped with an LC-MS filter. GC-TOF/MS (LECO Corp, MI, USA) based on silanization-derived GC-TOF/MS was used as an analytical platform for untargeted metabolomics.
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4

GC-TOF/MS-based Untargeted Metabolomics

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High-purity methoxyamine hydrochloride, fatty acid methyl ester (C7–C30, FAME), anhydrous pyridine (99.5%), and anhydrous sodium sulfate were obtained from Sigma-Aldrich (MO, USA). Derivatization reagents MSTFA (containing 1% TMCS), methanol (Optima LC-MS), and n-hexane were purchased from Thermo Fisher (NJ, USA). Dichloromethane (99.5%), chloroform (99%), and acetone (99.5%) were purchased from China National Pharmaceutical Group Corporation (Beijing, China). Ultrapure water was prepared from a Millipore Reference ultrapure water system (MA, USA) equipped with an LC-MS filter. GC-TOF/MS (LECO Corp, MI, USA) based on silanization-derived GC-TOF/MS was used as an analytical platform for untargeted metabolomics.
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5

Metabolic Profiling of Bacterial Endotoxin Response

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LPS (Escherichia coli 055: B5), methoxyamine hydrochloride, fatty acid methyl ester (C7-C30, FAMEs), anhydrous pyridine, and anhydrous sodium sulfate were purchased from Sigma-Aldrich (St. Louis, MO, USA). PBS, derivatization reagent MSTFA (containing 1% TMCS), methanol (Optima LC-MS), and n-ethane were purchased from Thermo Fisher (Fair Lawn, NJ, USA). Dichloromethane, chloroform and acetone were purchased from the China National Pharmaceutical Group Corporation, Peking, China. Chloral hydrate powder and paraformaldehyde were purchased from Sinopharm Chemical Reagent Co., Ltd, Shanghai, China. The AXSYM automatic immunoassay analyzer for liver and kidney function tests was purchased from Abbott Laboratories, Illinois, USA. Experimental ultrapure water was prepared from a Millipore Reference ultrapure water system (Billerica, MA, USA) equipped with a liquid chromatography coupled 0.22 μm filter. A GC-TOFMS spectrometer was purchased from (LECO Corp., St. Joseph, MI, USA).
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