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2 protocols using cdk1 y15

1

Molecular Markers for Cell Cycle and Apoptosis

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Primary antibodies used were from Cell Signalling unless otherwise mentioned: β-actin (Abcam #ab6276), BrdU (BD Pharmingen #555627), cleaved caspase 3 (#9664), CDK1 (Abcam #ab18), CDK1 Y15 (#9111), CHK1 (#2360), CHK1 S296 (#2349), CHK1 S345 (#2348), ENT1 (Abcam #ab135756), H2AX (#7631), H2AX S139 (Millipore #05-636), H3 (#9715) and H3 S10 (#3377). For secondary antibodies, Alexa 488 (#4408, #4412) and Alexa 647 (#4410, #4414) from Cell Signalling were used in immunostaining. IRDye800-conjugated (#925-32210, #926-33210) and IR680-conjugated (#926-68070, #926-68021) antibodies from LICOR were used in immunoblotting.
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2

Protein Expression Analysis in Lung Cell Lines

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In order to create protein lysates from MRC-5, A549, Calu-3, H1975, and H2228, protease and phosphatase inhibitors were added to radioimmunoprecipitation assay (RIPA) lysis solution (Thermo Fisher Scientific). The bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific) was used to measure the amounts of proteins. After sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) for electrophoresis, polyvinylidene fluoride (PVDF) membranes (Millipore, Burlington, MA, USA) were transferred. Immunoblotting was carried out using primary antibodies against CDC25C, Bax, Bcl-2, LC3 I, LC3 II, p62, cyclin B, CDK1-Y15, CDK1, c-PARP, and GAPDH (all at 1:1,000; Abcam, Cambridge, MA, USA). Post-washing thrice with tris-buffered saline with Tween 20 (TBST), membranes were processed for band visualization using an enhanced chemiluminescence (ECL) kit (Thermo Fisher Scientific). Using the ChemiDoc system from Bio-Rad (Hercules, CA, USA), the intensities of the protein bands were recorded and subsequently analyzed with ImageJ software (National Institutes of Health, Bethesda, MD, USA).
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