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4 protocols using anti hdac1 sc 7872

1

Western Blot Analysis of Epigenetic Regulators

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For analyses, we used the following primary antibodies: anti-METTL3 (A8370; AB Clonal); anti-METTL14 (A8530; AB Clonal); anti-HDAC1 (sc-7872; Santa Cruz Biotechnology, Dallas, TX, USA); anti-HDAC3 (SAB1404635, Prague, Sigma Aldrich); anti-H3K4me2 (07–030, Upstate, St. Louis, MO, USA); anti-H3K9me3 (ab8898, Abcam, Cambridge, UK); anti-α-actinin (A7811; Sigma-Aldrich, Prague, Czech Republic); and anti-troponin (ab47003, Abcam, Cambridge, UK). The following secondary antibodies were used for Western blot analyses: anti-rabbit IgG (A4914, Sigma Aldrich, Prague, Czech Republic) and anti-mouse IgG (A9044, Sigma Aldrich, Prague, Czech Republic). Protein concentration was measured by µQuantTM microplate spectrophotometer (BioTek, see at https://www.artisantg.com/Scientific/71777-1/Bio-Tek-uQuant-Universal-Microplate-Spectrophoto-meter). Gels were stained by amido-black 10 B. The density of Western blot fragments was measured, and data were normalized to the level of total proteins. All blots were imaged on Amersham Imager 680. The final quantification of protein levels was performed using Image Studio Ver.5.2.
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2

Fibroblast Extracellular Matrix Analysis

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Fibroblasts and their associated matrix were solubilized directly on the culture plate with Laemmli loading buffer 2.5% β-mercapto-ethanol; samples were passed through a 23G needle three times to sheer genomic DNA and then boiled for 5 min. Culture supernatants were centrifuged to eliminate cellular debris, mixed with Laemmli loading buffer 2.5% β-mercapto-ethanol, and boiled for 5 min. All samples were fractionated by SDS-PAGE (7% acrylamide), transferred to nitrocellulose membrane, and immunoblotted with anti-β1 integrin (anti-CD29 clone 18; BD Biosciences), anti-GFP (cat. number 600-101-215; Rockland Immunologicals), anti-vinculin (clone hVin-1; Sigma-Aldrich), anti-human FN (P1H11, Developmental Studies Hybridoma Bank), and anti-HDAC1 (sc-7872; Santa Cruz Biotechnology) antibodies. After incubation with IRDye680 or IRDye800-conjugated secondary antibodies (Li-COR Biosciences), the signal was scanned on an Odyssey CLx Imaging system (Li-COR Biosciences) and analyzed with ImageStudioLite (Li-COR Biosciences).
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3

Immunomodulatory Effects of Vitamin D, ATRA, and Curcumin

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1,25D was purchased from Cayman Europe (Tallinn, Estonia), ATRA and curcumin were from Sigma. The compounds were dissolved in an absolute ethanol to 1000 × final concentrations, and subsequently diluted in the culture medium to the required concentration. IFNα (cat. no. 11343506), IFNγ (cat. no. 11343536) and antibodies CD11b-FITC (cat. no. 21279113) and CD14-PE (cat. no. 21270144), as well as appropriately labeled isotype controls were from ImmunoTools (Friesoythe, Germany). Mouse monoclonal anti-VDR (sc-13133), anti-Stat1 p84/p91 (sc-464) and anti-p-STAT1 (sc-8394), rabbit polyclonal anti-actin (sc-1616), anti-HDAC1 (sc-7872) and anti-Histone H1 (sc-10806) were from Santa Cruz Biotechnology Inc. (Santa Cruz Biotechnology Inc., CA). Goat anti-rabbit IgG, anti-mouse IgG conjugated to peroxidase, anti-mouse conjugated to biotin and streptavidin conjugated to peroxidase were from Jackson ImmunoResearch (West Grove, PA).
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4

Western Blot Analysis of HDACs

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Preparation of cell lysates and Western blot analysis were conducted as described in detail in the Methods section in this article's Online Repository. The blots were incubated with the antibodies anti-HDAC1 (sc-7872) and anti-HDAC2 (sc-7899; Santa Cruz Biotechnology, Santa Cruz, Calif), anti-signal transducer and activator of transcription (STAT) 3 (#9139; Cell Signaling, Danvers, Mass), anti-AcH4 (06-866; Upstate Biotechnology, Lake Placid, NY), or anti-GAPDH (#4300; Life Technologies, Grand Island, NY), and detection was performed and quantified by using the Odyssey Infrared Imaging System (LI-COR Biosciences, Lincoln, Neb).
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