The largest database of trusted experimental protocols

5 protocols using lsm880 axioobserver z1 confocal microscope

1

Immunofluorescence Staining of Mitochondria

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lines were plated onto #1.5 thickness, 12 mm round glass coverslips (Thermo Fisher Scientific) coated with Matrigel at ∼20% confluency and allowed to adhere overnight. Coverslips were washed with PBS and subsequently fixed in 4% paraformaldehyde in PBS at room temperature for 15 min. Coverslips were washed with PBS and incubated with 1:200 TOM20 (ProteinTech Group, 11802-1-AP) antibody prepared in PBS and 1% BSA for 2.5 h. Coverslips were then washed three times with PBS and incubated with 10 μg/ml Hoechst33342 counterstain (Invitrogen, H3570) and 1:200 Donkey Anti-Rabbit IgG (H + L) Cy5 (Jackson ImmunoResearch, 711–175–152) for 2 h. Coverslips were mounted onto Fisherbrand Superfrost Plus Microscope Slides (Thermo Fisher Scientific) using Shandon Immu-Mount solution (Thermo Fisher Scientific). Images were acquired through a Zeiss LSM880 AxioObserver Z1 confocal microscope with AiryScan using a 63x 1.4 NA oil objective. Images were processed using ZenBlue 3.2 software (Zeiss; https://www.zeiss.com/microscopy/en/products/software/zeiss-zen.html).
+ Open protocol
+ Expand
2

3D Confocal Microscopy Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
Z-stack images separated by 0.2 μm were acquired on a Zeiss LSM880 AxioObserver Z1 confocal microscope with Airyscan. 3D surfaces were rendered from Z-stack image files using Imaris.
+ Open protocol
+ Expand
3

Tracking EBOV VLP Dynamics in Vero Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Vero cells were seeded to approximately 70% confluency and transfected with a plasmid encoding GFP-Utrophin, a gift from William Bement (Addgene plasmid # 26737) [29 (link)], using jetPRIME transfection reagent (Polyplus transfection) according to the manufacturer’s protocol. Twenty-four hours post-transfection, cells were re-seeded onto chamber slides (Lab-Tek, Scotts Valley, California, USA) to about 60% confluency. The next day, cells were pre-incubated with inhibitor or vehicle and mCherry EBOV VLPs were added. Live-cell imaging was performed immediately after addition of VLPs and proceeded for no longer than 30 min. The live imaging was performed on a Zeiss LSM 880 AxioObserver Z1 confocal microscope using AiryScan FAST mode on a single z plane. The environmental control chamber was set to 37 °C, 5% CO2 and a 63x/1.4NA oil objective was used. Image analysis was performed using Imaris software (Bitplane) by tracking modeled VLPs as spots over time using the Brownian motion tracking algorithm.
+ Open protocol
+ Expand
4

Visualizing Curcumin Nanoparticle Interactions with Giant Unilamellar Vesicles

Check if the same lab product or an alternative is used in the 5 most similar protocols
The effect of interactions of hollow or various curcumin-loaded nano complexes on the structural integrity of zwitterionic GUV was visualized with confocal and widefield fluorescence microscopes. Each solution of calcein-loaded GUV (500 µL) was mixed with a solution of the nanoparticles (150 µL, 0.28 mg/mL) or 10% Triton X-100 (150 µL) prepared in a leakage buffer, vortexed for 1 min, and allowed to stand for 15 min before mounting on glass microscope slides. To image calcein-loaded and empty GUV in the solution after leakage, the morphology was visualized separately in the rhodamine B (λex 540, λem 625) and calcein (λex 494, λem 517) channels, with the Axio Imager 2 fluorescence microscope equipped with an Axiocam 506 monochromatic camera (Carl Zeiss, Oberkochen, Germany) and Zeiss LSM880 AxioObserver Z1 confocal microscope equipped with AiryScan FAST (Carl Zeiss, Oberkochen, Germany). Zen 2.3 pro and 3.4 software (Carl Zeiss, Oberkochen, Germany) were used for image processing and optimization.
+ Open protocol
+ Expand
5

FRET Donor-Acceptor Photobleaching Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
FRET experiments were performed on HEK293 cells expressing equimolar amounts of Sig‐1R‐mCh and Kv1.2‐GFP using a Zeiss LSM880 AxioObserverZ1 Confocal Microscope (Zeiss GmbH, Oberkochen, Germany), with excitation wavelengths of 561 nm and 488 nm for mCh and GFP, respectively. Cells were imaged in Phenol Red free MEM (Wisent Bioproducts) containing 10% FBS on a prewarmed 37°C stage with 5% CO2, using a 63× (NA 1.4) oil immersion objective (Zeiss). A resolution of 512 × 512 pixels was used, with a dwell time of 0.5 μsec/pixel. Following five frames of prebleach baseline, a square region of interest (ROI) was bleached at 80% 561 nm laser power for 2.5 sec. 15 frames were captured postbleach. FRET efficiency was measured via increased donor (GFP) emission following acceptor photobleaching (mCh), using the formula: E=1-(Ipre/Ipost) where Ipre and Ipost are the fluorescent intensities of the donor before and after photobleaching (Bajar et al. 2016). Mean fluorescent intensities within the ROI were determined using Fiji (Schindelin et al. 2012) and were background subtracted prior to analysis. As an internal control, FRET efficiency was calculated within a nonbleached ROI of each cell to account for false‐positive FRET signals.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!