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10 protocols using mouse inflammation cytometric bead array cba

1

Multiplex Cytokine Profiling by CBA

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Secretion of TNF-α, IL-6, MCP-1, IFN-γ, IL-12p70, and IL-10 cytokines was analyzed with the mouse inflammation cytometric bead array (CBA, BD Biosciences) by flow cytometry according to the manufacturer’s protocol. Cytokine concentrations were calculated using the FCAP Array Software (BD Biosciences). In addition, to validate the absence of IL-10 secretion, cell culture supernatants were analyzed by ELISA using the mouse IL-10 DuoSet ELISA (R&D Systems Inc.).
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2

Quantifying D- and L-Lactate in Staphylococcal Biofilms

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D- and L-lactate concentrations in supernatants from S. aureus WT and lactate mutant biofilm in vitro, mouse implant-associated tissue homogenates, and human synovial fluid were determined using D- and L-Lactate colorimetric assays according to the manufacturer’s instructions (Cat. #s K667–100 and K607–100, respectively; BioVision). Murine IL-10 levels in supernatants from MDSC- or macrophage-biofilm co-cultures and tissue homogenates were quantified using a Mouse Inflammation Cytometric Bead Array (CBA; Cat #552364, BD Biosciences) or sandwich ELISA (Mouse DuoSet; Cat. #DY417–05, R&D Systems). IL-10 in human synovial fluid samples and human monocyte-derived macrophages was measured by ELISA (Cat. #430604, BioLegend).
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3

Influenza A/x31 Induced Lung Cytokines

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Lungs were harvested from Nkx2.1creTpl2flox/- mice, placed in 1 ml PBS and dissociated with a bead mill homogenizer (Qiagen). Lung homogenates were centrifuged at 500 x g for 5 min. Cytokines were quantified using a custom Procartaplex Immunoassay (Thermo-Scientific), IFN-α and IFN-β Luminescent ELISA kits (Invivogen) and Mouse Inflammation Cytometric Bead Array (CBA, BD Bioscience). IFN-λ3 (IL-28B) was measured using a colorimetric ELISA (Invitrogen). Hydroxyproline assay kit (Sigma, MAK357) was utilized to determine collagen levels in Nkx2.1creTpl2flox/- lungs infected with influenza A/x31 for 8 days prior to harvesting.
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4

Ex Vivo Cytokine Profiling in Murine Tissues

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Colonic explants were cut longitudinally, rinsed in PBS, and strips of ≈1 cm2 tissue and ex vivo biopsies taken from liver (approximately 1 cm3), kidney (one half), and MLN (3 lymph nodes) were placed into 24 flat-bottom-well culture plates (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with 500 μL serum-free RPMI 1640 medium (Thermo Fisher Scientific, Waltham, MA, USA) as well as penicillin (100 U/mL) plus streptomycin (100 µg/mL; Biochrom, Berlin, Germany). After incubation for 18 h at 37 °C, respective culture supernatants as well as serum samples were tested for TNF-α and IFN-γ by the Mouse Inflammation Cytometric Bead Array (CBA; BD Biosciences, Heidelberg, Germany) on a BD FACSCanto II flow cytometer (BD Biosciences, Heidelberg, Germany).
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5

Ex Vivo Colon and MLN Cytokine Profiling

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Ex vivo colonic biopsies of approximately 1 cm2 from the colon were longitudinally cut and washed in PBS. Colon tissue and samples of MLN (3 nodes in total) were cultured for 18 h at 37°C in 24-flat-bottom well culture plates (Thermo Fisher Scientific, Waltham, MA, USA) containing 500 μL serum-free RPMI 1640 medium (Thermo Fisher Scientific, Waltham, MA, USA), plus penicillin (100 U/mL; Biochrom, Berlin, Germany) and streptomycin (100 μg/mL; Biochrom, Berlin, Germany). Following the manufacturers’ protocol for the Mouse Inflammation Cytometric Bead Array (CBA; BD Biosciences, Heidelberg, Germany) on a BD FACSCanto II flow cytometer (BD Biosciences, Heidelberg, Germany), respective culture supernatant samples were tested for interleukin-6 (IL-6), interferon-γ (IFN-γ), tumor necrosis factor-alpha (TNF-α), and monocyte chemoattractant protein-1 (MCP-1).
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6

Quantifying D- and L-Lactate in Staphylococcal Biofilms

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D- and L-lactate concentrations in supernatants from S. aureus WT and lactate mutant biofilm in vitro, mouse implant-associated tissue homogenates, and human synovial fluid were determined using D- and L-Lactate colorimetric assays according to the manufacturer’s instructions (Cat. #s K667–100 and K607–100, respectively; BioVision). Murine IL-10 levels in supernatants from MDSC- or macrophage-biofilm co-cultures and tissue homogenates were quantified using a Mouse Inflammation Cytometric Bead Array (CBA; Cat #552364, BD Biosciences) or sandwich ELISA (Mouse DuoSet; Cat. #DY417–05, R&D Systems). IL-10 in human synovial fluid samples and human monocyte-derived macrophages was measured by ELISA (Cat. #430604, BioLegend).
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7

Cytokine Quantification in Vaginal Lavages

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Concentrations of cytokines in vaginal lavages were determined using Mouse Inflammation Cytometric Bead Array (CBA) (BD Biosciences) according to the manufacturer's protocol. The results were presented as the means of assays performed in triplicates. Data were analyzed by using FCAP Array 1.0.1 and BD Cytometric Bead Array 1.4 software.
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8

Colonic Tissue Cytokine Profiling

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Colonic ex vivo biopsies were cut longitudinally, washed in PBS, and strips of approximately 1 cm2 colonic tissue were placed in 24-flat-bottom well culture plates (Thermo Fisher Scientific, Waltham, MA, USA) containing 500 µL serum-free RPMI 1640 medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with penicillin (100 U/mL) and streptomycin (100 µg/mL; Biochrom, Berlin, Germany). After incubation for 18 h at 37 °C, colonic culture supernatants as well as serum samples were tested for TNF-α by the Mouse Inflammation Cytometric Bead Array (CBA; BD Biosciences, Heidelberg, Germany) on a BD FACSCanto II flow cytometer (BD Biosciences, Heidelberg, Germany).
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9

Colonic and Ileal Tissue Cytokine Profiling

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Longitudinally cut and washed (in PBS) colonic and ileal ex vivo biopsies (strips of approximately 1 cm2), as well as ex vivo biopsies derived from the MLN (3 nodes), were cultured for 18 h at 37 °C in 24-flat-bottom well culture plates (Thermo Fisher Scientific, Waltham, MA, USA) containing 500 μL serum-free RPMI 1640 medium (Thermo Fisher Scientific, Waltham, MA, USA), plus penicillin (100 U/mL; Biochrom, Berlin, Germany) and streptomycin (100 μg/mL; Biochrom, Berlin, Germany). Applying the Mouse Inflammation Cytometric Bead Array (CBA; BD Biosciences, Heidelberg, Germany) on a BD FACSCanto II flow cytometer (BD Biosciences, Heidelberg, Germany), respective culture supernatant samples were tested for interleukin-6 (IL-6), tumor necrosis factor-alpha (TNF-α), and monocyte chemoattractant protein-1 (MCP-1) according to the manufacturer’s instructions.
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10

Cytokine Profiling in Murine Organ Cultures

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Colonic ex vivo biopsies were cut longitudinally, washed in PBS, and strips of approximately 1 cm2 tissue as well as ex vivo biopsies derived from MLN (3 lymph nodes), liver (approximately 1 cm3), one kidney (cut longitudinally), and one lung were placed in 24-flat-bottom well culture plates (Nunc, Germany) containing 500 μL serum-free RPMI 1640 medium (Gibco, life technologies, UK) supplemented with penicillin (100 U/mL) and streptomycin (100 µg/mL; PAA Laboratories, Germany). After 18 h at 37 °C, culture supernatants were tested for tumor necrosis factor- (TNF-) α, interleukin (IL)-6, interferon (IFN)-γ, and monocyte chemoattractant protein (MCP)-1 by the Mouse Inflammation Cytometric Bead Array (CBA; BD Biosciences, Germany) on a BD FACSCanto II flow cytometer (BD Biosciences). Nitric oxide was measured by the Griess reaction as reported previously [33 (link)]. Systemic pro-inflammatory mediator concentrations were assessed in serum samples.
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