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21 protocols using fitc conjugated anti cd3

1

Isolation and Immunophenotyping of PBMCs

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PBMCs were isolated by centrifugation for 30min at 100g in 4°C. The whitish buffy coat between histopaque and medium was aspirated and was washed twice with 10 ml of sterile PBS. Frozen PBMC samples w thawed and were immunolabelled with following anti-human monoclonal antibodies: PerCP-conjugated anti-CD45 (Biolegend, San Diego, CA, USA), FITC-conjugated anti-CD3 (Biolegend, San Diego, CA, USA), APC-Cy7-conjugated anti-CD19 (BD Biosciences, San Jose, CA, USA), APC-conjugated anti-CD27 (Biolegend, San Diego, CA, USA) and PE-conjugated anti-IgD (BD Biosciences, San Jose, CA, USA). For memory B-cell transcriptome study using Nanostring assay, lymphocytes positive for CD19 and CD27 were sorted in 1.5 ml tubes. After 30 minutes of incubation in refrigerator at 4°C, samples were read by BD LSR Fortessa (BD Biosciences, San Jose, CA, USA).
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2

Spleen Index and Lymphocyte Phenotyping

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The spleens of mice were removed and then weighed to calculate the spleen index. The spleen tissue was cut, softly pressed and dispersed by passing through 70-μm cell strainers. Metacestode tissues were cut into pieces and then digested by 0.2% collagenase II to generate a single-cell suspension. The lymphocytes were separated based on gradient centrifugation with a lymphocyte separation kit (Tbdscience, Tianjin, China). The lymphocytes were incubated with FITC-conjugated anti-CD3 (BioLegend, San Diego, CA, USA), PE-conjugated anti-CD4 (BioLegend), and APC-conjugated anti-CD8 (BioLegend) antibodies, and then analyzed by flow cytometry using a NovoCyte flow cytometer (ACEA/Agilent, Santa Clara, CA, USA).
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3

Quantifying Melanoma-Specific T Cells

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To minimize non-specific staining, HLA-A2-Melan-A and MELOE-1 tetramers were tittered and used at the lowest concentration that showed a clearly distinguishable positive T-cell population [1 (link)]. Total blood (3 mL) from melanoma patients at different time-points were incubated with 10 µg/mL of either Melan-A or MELOE-1/HLA-A*0201 APC-tetramers and with PE-conjugated anti-CD8 (Biologend) and FITC-conjugated anti-CD3 (Biolegend), for 1 h at 4 °C in the dark, with gentle agitation every 15 min. After incubation, the red blood cells are lysed through incubation in 10 volumes of lysis solution (BD Biosciences), during 15 min at room temperature. After washing in PBS-0.1%BSA, cells were resuspended in PBS and analyzed on a FACSCanto. Frequencies of antigen-specific T-cells are calculated based on the number of tetramer positive cells, divided by the total number of CD3+/CD8+ T lymphocytes analyzed.
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4

Antibody-based Characterization of TRPA1

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An anti-TRPA1 antibody (1:500 dilution) was obtained from Novus Biologicals (Littleton, CO, USA). The selective TRPA1 antagonists HC-030031 (HC) and TCS-5861528 (TCS) were purchased from R&D Systems (Minneapolis, MN, USA). Wheat germ agglutinin (WGA, 1:200 dilution) was purchased from Sigma-Aldrich (St. Louis, MO, USA). Antibodies for T-CaMKII (1:1000 dilution), calcineurin (1:1000 dilution), GAPDH (1:2500 dilution), α-smooth muscle actin (α-SMA, 1:500 dilution), CD3 (1:200 dilution), and CD68 (1:200 dilution) were purchased from Abcam (Cambridge, MA, USA). An antibody for p-CaMKII (1:1000 dilution) was purchased from GeneTex (Irvine, CA, USA). Antibodies for CD206 (1:200 dilution) were purchased from R&D Systems (Minneapolis, MN, USA). Fluorescein isothiocyanate (FITC)-conjugated anti-CD206, allophycocyanin (APC)-conjugated anti-F4/80, phycoerythrin (PE)-conjugated anti-CD45 and FITC-conjugated anti-CD3 were purchased from BioLegend (San Diego, CA, USA). Secondary antibodies and goat anti-rabbit IgG were obtained from LI-COR Biosciences (Lincoln, NE, USA). All other chemicals were of analytical grade.
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5

Flow Cytometry Analysis of GPC3 Expression

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Tumour cell lines were stained with fluorescein isothiocyanate (FITC)-labelled anti-human GPC3 antibody (Cat: MA5–40987, Invitrogen) to detect the expression of GPC3. The expression of GPC3 CAR on NK cells was detected by staining with phycoerythrin (PE)-labelled human GPC3 protein (Cat: GP3-HP3E3, arcobiosystems). The FITC-conjugated anti-CD3 (Cat: 300306), FITC-conjugated anti-CD107a (Cat: 328606), PE-conjugated anti-PD-1 (Cat: 329905), PE-conjugated anti-PD-L1(Cat: 329705) and APC-conjugated anti-CD56 (Cat: 318310) antibodies were obtained from Biolegend.
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6

Multicolor Flow Cytometry Analysis

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A 100 μL aliquot of blood was incubated with Cyanine7-conjugated anti-CD45, fluorescein isothiocyanate- (FITC-) conjugated anti-CD3, Cyanine5.5-conjugated anti-CD4, and phycoerythrin- (PE-) conjugated anti-CD25 antibodies (Biolegend, San Diego, CA, United States) at 4°C for 30 min, respectively. The cell suspension was transferred into tubes and washed in phosphate-buffered saline (PBS). All stained cells were analyzed using a FACSCanto II flow cytometer (BD Biosciences) and the FlowJo software.
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7

Profiling Tumor-Infiltrating T Cells

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To analyze the population
of T cells within the TME, cells were collected from the tumors on
day 10 following various treatments. This was achieved using a tumor
dissociation kit (Miltenyi Biotec, North Rhine-Westphalia, Germany)
along with a dissociator (GentleMACS, Miltenyi Biotec) to obtain single-cell
suspensions, which were then filtered through a 70 μm strainer
(Smartstrainer, Miltenyi Biotec) to eliminate larger debris. Thereafter,
the resulting single-cell suspensions underwent a blocking step with
antimouse CD16/32 antibodies (101302, 1:25, BioLegend) and were subsequently
stained with the following antibodies: APC/cyanine7- conjugated anti-CD45
(103116, 1:40, BioLegend), FITC-conjugated anti-CD3 (100204, 1:25,
BioLegend), PE-conjugated anti-CD8a (100708, 1:100, BioLegend), and
APC-conjugated anti-CD4 (100412, 1:100, BioLegend) antibodies. The
antibody staining process occurred over a period of 30 min at 4 °C,
followed by 7-AAD viability staining (420404, BioLegend). The stained
cells were then analyzed using a cell sorter (Aurora CS, Cytek Biosciences,
Fremont, CA, USA), and the data were analyzed using FlowJo Software
(Treestar, Ashland, OR, USA).
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8

Labeling Murine B Cells with Flow Cytometry

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Peripheral blood was obtained from the orbital sinus of anesthetized mice. Mononuclear cells were isolated from peripheral blood using erythrocyte lysate. FITC-conjugated anti-CD3 (Biolegend) and PerCP-Cy5.5-conjugated CD19 (BD Biosciences) antibodies were used to label B cells. For labeling, 105 cells were incubated with antibodies at 4°C for 1 h, washed twice, and centrifuged (1000 rpm, 10 min, 4°C). Labeled cells were analyzed on a FACSCanto II flow cytometer using Cell QuestPro acquisition software. In addition, data were analyzed using FlowJo 7.6.1 software.
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9

Flow Cytometry Analysis of Immune Cells in Lacrimal Glands

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FACS analysis was performed as described previously.30 (link) Briefly, single-cell suspensions of four LGs from each condition were prepared by treating minced tissue fragments with 100 U/ml collagenase D and 15 μg/ml DNase (Sigma-Aldrich) for 40 min at 37 °C. After blocking with 1 μg unlabeled anti-FcrR antibody (clone 2.4G2), cells (1 × 106) were washed with RPMI-1640 and surface-stained with PE-Cy5-conjugated anti-CD11b, PE-conjugated anti-PI (eBioscience, San Diego, CA, USA), FITC-conjugated anti-CD3, PE-conjugated anti-7-AAD (Biolegend, San Diego, CA, USA), or FITC-conjugated anti-Annexin V (eBioscience), and then analyzed by FACS (FACSCalibur, Becton-Dickinson, Mountain View, CA, USA). For the separation of CD45+ and CD45 cells in LGs, FACS ARIA (BD) was used after APC-conjugated anti-CD45 staining (eBioscience).
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10

Comprehensive Immune Cell Profiling

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The following antibodies to human proteins were used: from BioLegend, fluorescein isothiocyanate (FITC)-conjugated anti-CD3 (OKT3), anti-CD14 (HCD14), anti-CD16 (3G8), anti-CD19 (HIB19), anti-CD34 (581), anti-CD94 (DX22), anti-CD123 (6H6), anti-FcER1α (Fc epsilon receptor I alpha) (AER-37); phycoerythrin (PE)-conjugated anti-ICOS (CD278, C398.4A), anti-NKp44 (P44-8), anti-VEGFR2 (7D4-6); brilliant violet (BV) 421-conjugated anti-CD161 (HP-3G10), BV421 anti-CD45RO (UCHL1); allophycocyanin (APC)-conjugated anti-CCR6 (29-2L17), anti-CCR7 (4B12), anti-CXCR5 (J252D4), anti-LFA-1 (M17/4), anti-NRP1 (12C2), and APC-cy7 anti-CD45RA (HI100); from BD Biosciences, PE-CF594-conjugated anti-CD3 (UCHT1) and anti-CD62L (DREG-56); from Becton Dickinson: FITC-conjugated anti-CD34 (581), anti-TCRαβ (IP26), and TCRγδ (B1); from Beckman Coulter, phycoerythrin-Cy7-conjugated anti-CD127 (R34.34) and PE Cy5.5-conjugated anti-CD117 (104D2D1); and from Miltenyi, PE-conjugated anti-NRP1 (AD5-17F6). For phenotypic analyses by flow cytometry, data were collected with an LSRFortessa instrument (BD Biosciences) and analyzed with FlowJo software (Tree Star).
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