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Seahorse xf extracellular flux analyzer

Manufactured by Agilent Technologies
Sourced in United States

The Seahorse XF Extracellular Flux Analyzer is a lab equipment product from Agilent Technologies. It is designed to measure the extracellular flux of cells, including oxygen consumption rate and extracellular acidification rate, in a multiwell plate format.

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34 protocols using seahorse xf extracellular flux analyzer

1

Oxygen Consumption Rate Determination

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Oxygen consumption rate (OCR) was determined using the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience, North Billerica, MA). BTICs were plated at 80,000 cells per well for measurement. Three metabolic inhibitors were sequentially loaded to each well at specific time points: Oligomycin (0.75 µM), followed by FCCP (0.75 µM), followed by the addition of a combination of Rotenone (0.1 µM) and Antimycin (0.1 µM).
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2

Measuring Glioma Cell Metabolism

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The oxygen-consumption rates (OCR) of glioma cells and SLCs were measured using the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience). Twenty-four-well plates (Seahorse Bioscience) were coated with 50 μL poly-d-lysine (10 μg/mL) for 2 h then coated with laminin (10 μg/mL) overnight. The next day washed the wells twice with saline, and 10,000–100,000 cells were plated per well. Three metabolic inhibitors were injected sequentially as specific time points: oligomycin (1 μM), followed by FCCP (0.75 μM), followed by a combination of rotenone and antimycinA (0.5 μM). Basal OCR were measured using the Seahorse XF24 plate reader. Several parameters of oxygen consumption were analyzed as previously reported25 (link).
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3

Measuring Cellular Oxygen Consumption

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The oxygen consumption rates of control and YARS cells were determined using the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience Inc., North Billerica, MA). Briefly, cells were plated at a density of 40,000 cells/well (24-well plates (Seahorse Bioscience Inc)). The following day, the cells were washed, and fresh media were added. The sensor cartridge was loaded to dispense three metabolic inhibitors sequentially at specific time points: oligomycin (inhibitor of ATP synthase, 1 μM), followed by FCCP (a protonophore and uncoupler of mitochondrial oxidative phosphorylation, 0.5 μM), followed by the addition of a combination of R/A (mitochondrial complex I inhibitor, 1 μM). Basal oxygen consumption rate (OCR) was measured as well as the changes in oxygen consumption caused by the addition of the metabolic inhibitors described above. Several parameters were deducted from the changes in oxygen consumption, such as basal OCR and maximum mitochondrial capacity, as described previously [19 (link)].
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4

Measuring Muscle Oxygen Consumption

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Soleus muscle was isolated from mice and immediately finely minced in PBS, placed in the bottom of a Seahorse Islet Capture Microplate, and oxygen consumption was assessed with the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience, Billerica, MA) as described previously (Vergnes et al., 2011 (link)).
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5

Measuring Cellular Oxygen Consumption

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According to the manufacturer’s instructions, the cellular oxygen consumption rate (OCR) was measured on a Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience, Santa Clara, MA, USA). After treatment with 3 µM chidamide and/or 5 µM apatinib for 24 h, Molt4 and Jurkat cells (3 × 105 cells per well) were resuspended in XF media and plated in XFe-96 plates in XF media. Real-time measurement of OCR was performed on an XFe-96 Extracellular Flux Analyzer (Seahorse Bioscience). OCR was measured in XF medium (non-buffered DMEM medium containing 10 mM glucose and 1 mM sodium pyruvate) under basal conditions, as well as in response to 1 μM oligomycin, 1 μM of FCCP (carbonylcyanide-4-(trifluoromethoxy)-phenylhydrazone) and 1 μM of antimycin and rotenone (Sigma-Aldrich, St. Louis, MO, USA), respectively. The experiment using the Seahorse system was performed under the following conditions: mixture, 3 min; wait, 3 min; measurement time, 3 min.
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6

Oxygen Consumption Rate Determination

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Oxygen consumption rate (OCR) was determined using the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience, North Billerica, MA). BTICs were plated at 80,000 cells per well for measurement. Three metabolic inhibitors were sequentially loaded to each well at specific time points: Oligomycin (0.75 µM), followed by FCCP (0.75 µM), followed by the addition of a combination of Rotenone (0.1 µM) and Antimycin (0.1 µM).
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7

Characterizing Cellular Metabolism via Seahorse Assay

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Oxidative consumption (OCR) and extracellular acidification (ECAR) were determined with the use of a Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience). Cells were seeded in 24‐well plates (1.5 × 104 cells per well) and cultured overnight, after which the culture medium was replaced with extracellular flux (XF) assay medium (Seahorse Bioscience) containing 25 mM glucose and 10 mM glutamine, and the cells were cultured for 1 hour in a CO2‐free incubator before measurement of OCR and ECAR.
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8

Mitochondrial Function Evaluation in C2C12 Cells

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Mitochondrial function was evaluated by measuring the oxygen consumption rate on the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience, USA) according to the manufacturer's protocol. The C2C12 cells were treated with the JTXK drug-containing serum or control vehicle in XF24 analyzer microplates. 48 h later, the medium was changed to an XF basic medium supplemented with 11 mM glucose, 4 mM glutamine, and 2 mM pyruvate. Then, the cells were incubated with the sequential addition of 1 μM oligomycin, 5 μM carbonyl cyanide-(trifluoromethoxy)phenylhydrazone, and 0.5 μM rotenone/antimycin A. The mitochondrial respiratory parameters, such as basal respiration, ATP production, maximum respiration, and spare respiratory capacity, were calculated.
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9

Extracellular Flux Analysis of Cell Metabolism

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This experiment was performed using the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience, Billerica, MA, USA). Briefly, CAL-27 and SCC-4 cells were successively treated with glucose, oligomycin (OM) and 2-deoxy glucose (2-DG) at the indicated points after transfection for 48 h, and the ECAR of cells was monitored.
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10

Mitochondrial Respiration Profiling

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The oxygen consumption rate (OCR) of cells was determined by using the Seahorse XF Extracellular Flux Analyzer (Seahorse Bioscience) and a XF Cell Mito Stress Test Kit. Cells were trypsinized and plated on a miniplate with the same seeding density 24 hours prior to the Seahorse assay. The assay medium consisted of 5 mM glucose, 500 μM glutamine, 250 μm pyruvate and 500 μM glycerol in Seahorse base medium. The OCR was monitored upon serial injections of oligomycin (oligo, 2 μM), FCCP (1 μM, optimized), and a rotenone/antimycin A mixture (rot/AA, 1 μM). OCR was normalized to the final protein amount in each well as determined by BCA assay. Data presented were corrected for non-mitochondrial respiration.
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