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Saturated picric acid

Manufactured by Merck Group
Sourced in United Kingdom, United States

Saturated picric acid is a chemical compound used in various laboratory applications. It serves as a sensitive reagent for the detection and identification of certain organic compounds. The core function of saturated picric acid is to provide a colorimetric, or visible, reaction when mixed with specific substances, allowing for their identification and analysis.

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21 protocols using saturated picric acid

1

Renal Fibrosis Assessment in Mice

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Paraffin sections of mouse kidneys were examined for renal fibrosis with the Picro-Sirius Red staining. Briefly, deparaffinized sections were treated with 0.1% Sirius Red in saturated picric acid (Sigma, St Louis, MO) and destained in 0.5% acetic acid. Collagen fibrils were stained and evaluated under light microscopy (Nikon) equipped with a polarizer. Ten randomly selected fields (magnification, x400) from cortex and medullar, respectively, in each kidney were evaluated and all images were captured by Olympus DP72 Capture Interface software. Ratio of Sirius red positive areas to whole areas in each field was calculated in percentages by Image J (NIH) software.
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2

Quantification of Collagen Deposition

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Extracellular matrix collagen deposition was evaluated with picrosirius red staining. Briefly, samples were washed twice in PBS and fixed in 10% neutral buffered formalin (NBF, Cellpath, Newtown, UK) for 30 min, prior to staining with 0.1% sirius red in saturated picric acid (Sigma-Aldrich, Gillingham, UK) for 1 h. The unbound dye was removed by washing in 0.5 M acetic acid (Sigma-Aldrich, Gillingham, UK) followed by distilled water wash and left to air dry. To quantify collagen staining, 0.5 M sodium hydroxide (Sigma-Aldrich, Gillingham, UK) was used to elute the bound dye and absorbance were read at 590 nm using the SPARK spectrophotometer (TECAN, Männedorf, Switzerland).
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3

Histology and Immunocytochemistry Protocol

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For histology and immunocytochemistry, human and mouse tissues were fixed in 4% PFA, decalcified using Immunocal decalcification solution and then paraffin embedded. Paraffin blocks were sectioned at 10 μm. For histological analyses, sections were stained with Picrosirius Red. For Picrosirius Red staining, deparaffinized and rehydrated sections were stained in a 0.1% Direct Red 80 (Sigma, 43665)/Saturated Picric Acid (Sigma, P6744) solution followed by counterstaining Hematoxylin QS.
For immunohistochemistry, paraffin sections were boiled for 20 minutes in Antigen Unmasking Solution (Vector) and subsequently stained using a Rabbit Specific HRP/DAB (ABC) Detection IHC Kit (Abcam). Primary antibodies used were: anti-SIK3 antibody, 1:50 Abcam 88495; anti-DEPTOR 1:500, Proteintech 20985–1-AP; anti-pS6 1:400 Cell Signaling 2211.
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4

Comprehensive Histological Evaluation of Liver

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Tissue sections were prepared and stained for hematoxylin and eosin. Steatosis and liver fibrosis, cholangiocyte proliferation, liver angiogenesis or liver cell death were assessed via Sirius Red staining - liver sections were incubated with Fast Green FCF (Thermo Fisher scientific) and Direct Red (Sigma-Aldrich) in saturated picric acid (Sigma-Aldrich) for 2 h at room temperature, immunohistochemistry using α-SMA (Abcam), CK19 (Developmental studies hybridoma bank), and CD31 (Abcam) antibodies, or terminal deoxynucleotidyl transferase dUTP nick-end labeling (TUNEL) assay (Millipore) according to the manufacture’s protocol. All pictures were taken by NanoZoomer 2.0HT Slide Scanning System (Hamamatsu) and quantitated on Image J software.
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5

Collagen Quantification in hGFs

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After 14 d of culture, hGFs were washed with phosphate buffer saline (PBS) (Biowest, Nuaillé, France), dried overnight at 37 °C in a humidified atmosphere and dried for 24 h at 37 °C in a dry atmosphere. Collagen was stained with 0.1% Sirius red F3BA (Sigma, Saint Louis, Missouri, MO, USA) in saturated picric acid (Sigma, Saint Louis, Missouri, MO, USA) for 1 h. Unbound die was removed by washing with 10 mM HCl (Scharlab, Barcelona, Spain), and dye was solubilized with 100 mM NaOH (Scharlab, Barcelona, Spain). Absorbance was measured with a microplate reader at 540 nm.
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6

Quantifying Liver Fibrosis via Sirius Red

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For fibrosis quantification, the liver was excised, washed with PBS, and fixed with 10% buffered formaldehyde solution for 24 h. Afterwards, the liver tissue was embedded in paraffin and 6 μm liver sections were obtained. Before staining, paraffin was removed using xylene, xylene/ethanol 1:1, ethanol, ethanol/deionized water 1:1, and deionized water (5 min in each solution). Liver sections were stained in 0.1% Sirius Red F3B (Sigma) with saturated picric acid (Sigma). The relative fibrosis area (expressed as a percentage of total liver area) was analysed in 10 fields of Sirius red-stained liver sections per animal using the morphometry software ImageJ. To evaluate the relative fibrosis area, the measured collagen area was divided by the net field total liver area and then multiplied by 100. From each animal analysed, the percentage of fibrosis area was calculated and the average value presented.
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7

Picrosirius Staining for Collagen Visualization

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Hamster cheek pouch tissue sections (2 mm thick) were subjected to the picrosirius staining protocol, as previously described in Reference [10 (link)]. Briefly, sections were deparaffinized and rehydrated, immersed in saturated picric acid (Finoric LLC, Houston, TX, USA) (2 g/100 mL) for 10 min. Sections were then stained for 30 min in a 0.1 per cent solution of Sirius red (0.1 g of Sirius red F3BA (Sigma-Aldrich, St. Louis, MO, USA), in 100 mL of saturated picric acid). This was followed by rinsing with tap water, and re-immersion in picric acid for 10 min. Slides were then dehydrated in absolute alcohol (Sigma-Aldrich®, Saint Louis, MO, USA), clarified in xylene (Sigma-Aldrich®, Saint Louis, MO, USA), and mounted in synthetic resin (Showa Denko k.k.®, Tokyo, Japan). Using polarized microscopy (Olympus, New York, NY, USA), this technique resulted in a red or yellow birefringent appearance of type I collagen.
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8

Picrosirius Red Staining for Collagen

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Another section was stained with picrosirius red, prepared using the method recommended by Puchtler et al. [18 (link)] to determine the collagen fiber birefringence and thickness. In this process, 0.1 g of Sirius Red F3BA was dissolved in 100 mL of saturated picric acid (both from Sigma Aldrich, St. Louis, MO, USA). Next, 5-µm-thick tissue sections were deparaffinized, followed by rehydration in decreasing grades of alcohol and hydration with deionized water. Staining was then done with 0.1% picrosirius red stain for 1 hour at room temperature. Sections were rinsed thoroughly in distilled water, counterstained with Mayer’s hematoxylin (5–6 minutes), and cover-slipped. Tissue sections of fibroma served as a positive control.
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9

Histological Evaluation of NAFLD in Mice

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The liver, thymus, and heart were weighed, fixed in 10% formalin overnight, and then embedded in paraffin and sectioned. Five-mm liver sections were stained either with hematoxylin and eosin (H&E) or with 0.1% Sirius red F3B (Sigma, St. Louis, MO, USA) in saturated picric acid (Sigma) [22 (link)]. H&E-stained sections were scored for steatohepatitis grade using the NASH activity score (NAS), which is defined as the sum of the scores for steatosis (0–3), lobular inflammation (0–3), and ballooning (0–2) [23 (link)]. Thus, the results were a continuum ranging from 0 to 8. NAS scores of 0–2 are considered not diagnostic of NASH, while scores of 3–4 are considered possible NASH, and scores of 5–8 are considered diagnostic of NASH. Fibrosis, believed to be a consequence of steatohepatitis, is measured separately from the NAS on a scale ranging from stage 0 to stage 4, with stage 4 indicative of cirrhosis. All liver sections were analyzed and scored in a blinded manner by a trained liver pathologist (Icahn School of Medicine at Mount Sinai Department of Pathology).
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10

Quantitative Collagen Deposition Assay

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After 14 days of cell culture, cells were washed with H2O, dried for 1 h at RT, followed by incubation for 1 h at −80 °C. Cells were then incubated overnight at 37 °C in a humidified atmosphere, followed by 24 h at 37 °C in a dry atmosphere. Collagen was stained with 0.1% Sirius Red F3BA (Sigma-Aldrich) in saturated picric acid (Sigma-Aldrich) for 1 h at RT. Unbounded dye was removed with 10 mM HCl washes, and dye was solubilized with 0.1 M NaOH. Absorbance was measured at 540 nm. Readings were compared with a calf-skin collagen standard (Calf skin type I Collagen, Sigma-Aldrich) included in the assay. Experiment was run in triplicate (n = 3) for each group and donor.
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