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Bio imaging system

Manufactured by Bio-Rad
Sourced in United States

The Bio-Imaging System is a versatile laboratory equipment designed for the analysis and documentation of various biological samples. It features a high-resolution camera and advanced optics to capture clear, detailed images of gels, blots, and other samples. The system provides a standardized platform for consistent and reliable image acquisition, enabling researchers to obtain reproducible results for their experiments.

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24 protocols using bio imaging system

1

Western Blot Analysis of EMT Markers

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Cells and human RCC tissues were lysed in radioimmunoprecipitation assay (RIPA) buffer (Beyotime, Beijing, China), supplemented with protease inhibitors (Roche, Shanghai, China) and the serine protease inhibitor phenylmethylsulfonyl fluoride (PMSF; Roche), at 4°C for 30min. The cell supernatants were extracted after centrifugation for 15 min at 14,000 rpm, then the concentration of the protein was determined using a BCA Protein Quantification kit (Beyotime Institute of Biotechnology). Proteins from tissues and cells were separated using 10% SDS-PAGE, transferred onto PVDF membranes (Millipore, Billerica, USA), blocked for 2h with 5% nonfat milk at room temperature, and incubated with primary antibodies at 4°C overnight. After that, the membranes were washed three times with TBST and incubated with a horseradish peroxidase-conjugated secondary antibody for 2 h at room temperature. Blots were detected using a Bio-Rad Bioimaging system (Bio-Rad, CA, USA), and antibodies against β-actin served as a negative control. Rabbit monoclonal antibodies (1:1000) against TGF-β1, E-cad, N-cad, Vimentin and MMP-9 (Cell Signaling Technology, USA) were used in Western blot analysis according to the manufacturer’s instructions.
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2

Quantifying TGF-β Signaling and ECM Regulation

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Cells and human RCC tissues were lysed in radioimmunoprecipitation assay (RIPA) buffer (Beyotime, Beijing, China), supplemented with protease inhibitors (Roche, Shanghai, China) and the serine protease inhibitor phenylmethylsulfonyl fluoride (PMSF; Roche), at 4°C for 30min. The cell supernatants were extracted after centrifugation for 15 min at 14,000 rpm, then the concentration of the protein was determined using a BCA Protein Quantifcation kit (Beyotime Institute of Biotechnology). Proteins from tissues and cells were separated using 10% SDS-PAGE, transferred onto PVDF membranes (Millipore, Billerica, USA), blocked for 2h with 5% nonfat milk at room temperature, and incubated with primary antibodies at 4 °C overnight. After that, the membranes were washed three times with TBST and incubated with a horseradish peroxidase-conjugated secondary antibody for 2 h at room temperature. Blots were detected using a Bio-Rad Bioimaging system (Bio-Rad, CA, USA), and antibodies against β-tubulin served as a negative control. Rabbit monoclonal antibodies (1:1000) against TGF-β, Smad2/3, p-Smad2, p-Smad, matrix metallopeptidase 2 (MMP2) and matrix metallopeptidase 9 (MMP9) (Cell Signaling Technology, USA) were used in Western blot analysis according to the manufacturer's instructions.
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3

Western Blot Analysis of Protein Expression

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The RIPA kit (Beyotime, Shanghai, China) supplemented with phenylmethanesulfonyl fluoride was used to extract protein lysate from CRC tissues and cells according to the protocols. The BCA Protein Assay Kit (Beyotime, Shanghai, China) was used to quantify the protein concentration. The protein lysate was separated via 10% SDS-PAGE (Beyotime, Shanghai, China), next, it was transferred onto a polyvinylidene fluoride membrane (Millipore, USA). The membranes were blocked with 5% skim milk powder for 2 h and then incubated with the specific primary antibody overnight at 4°C, followed by a wash in TBST. Then, the membrane was incubated with the corresponding secondary antibody for 2 h at room temperature and then rinsed in TBST for three times (10 min each time). The level of protein expression was detected by ECL Plus (Millipore, USA) using a Bio-Imaging System (Bio-Rad, USA). The antibodies against SP1, IκBα, p- IκBα, p65, p-p65, E-cadherin, ZO-1, N-cadherin, Vimentin, HIF-1α, Histone H3, and β-actin were purchased from Abcam (Cambridge, MA, USA).
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4

Western Blot Analysis of Cellular and EV Proteins

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Samples of cells and EVs were washed and resuspended in RIPA lysis buffer (Beyotime, Shanghai, China) with a protease and phosphatase inhibitor mixture (Millipore). Proteins were separated based on their molecular weight by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and then transferred onto polyvinylidene fluoride membranes (Millipore). The membranes were blocked with 5% skim milk powder in Tris-buffered saline containing Tween 20 (TBST) for 2 h, and were then incubated at 4 °C overnight with specific primary antibodies (details are listed in Table S1). The membranes were rinsed in TBST three times (10 min each time), incubated with secondary antibodies at room temperature for 2 h and then washed again in TBST (three times, 10 min each time). Protein expression levels were measured with ECL Plus reagent (Millipore) using a Bio-Imaging System (Bio-Rad, USA).
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5

Western Blot Analysis of Immune Markers

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TAM treated by DHA or other controls were washed three times with PBS and lysed in a RIPA buffer with 1% protease inhibitor for 40 min. Cell lysates were centrifuged and protein concentration was measured using a BCA Assay Kit. Equal proteins (10–30 μg) were fractionated by SDS-PAGE and transferred to a PVDF membrane. The membranes were blocked with 3–5% bovine serum albumin in TBST and incubated with primary antibodies of iNOS (ab15323, Abcam, Cambridge, United Kingdom), GBP5 (13220-1-AP, Proteintech, Wuhan, China), p53 (bs-2090R, Bioss, Beijing, China), γ-H2A.X (bs-3185R, Bioss, Beijing, China), NF-κB (10745-1-AP, Proteintech, Wuhan, China), p-NF-κB (bs-0982R, Bioss, Beijing, China), and GAPDH (PMK053C, BioPM, Wuhan, China) overnight at 4°C. Then the membranes were incubated with horseradish peroxidase-conjugated secondary antibodies. Protein bands were reacted using an ECL kit (PMK003, BioPM, Wuhan, China), and the films were exposed using a Bio-Imaging system (170-8265, Bio-Rad).
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6

Western Blot Analysis of IP6K2 in Glioma

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We conducted the Western blot assay according to the previous study [29 (link)]. Brifely, treated glioma cells were collected and lysed using a lysis buffer containing the protease inhibitor PMSF (Beyotime, Nantong, China), according to the BCA protein quantification kit (Beyotime, Nantong, China) to measure the protein concentrations. SDS-PAGE protein loading buffer was added, and the mixture was heated at 100°C to denature the protein. After loading and running, the separated proteins were transferred to a PVDF membrane, which was then cut according to the molecular weight. Antigen blocking was performed with 5% skimmed milk powder blocking solution. Antibodies against IP6K2 (ab179921; 1/1000) and GAPDH (ab8245; 1/1000) were purchased from Abcam (Cambridge, MA, USA). HRP-conjugated secondary goat anti-mouse and goat anti-rabbit antibodies (Proteintech, USA) were then added to the membrane and incubated. The membranes were then immersed in ECL Plus (Millipore, USA) at room temperature. Protein expression levels were detected using a Bio-Imaging System (Bio-Rad, USA).
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7

Western Blot and Immunoprecipitation Assay

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Total protein samples were extracted quantitatively from the lysis buffer (Pierce, Rockford, IL). The reagent or bound protein was eluted from protein G PLUS‐agarose (Santa Cruz Biotechnology), separated by SDS‐PAGE, transferred onto polyvinylidene fluoride membranes (PVDF; Millipore, Billerica, MA, USA), incubated with antibodies overnight at 4℃, followed by addition of oxidase‐conjugated anti‐mouse or anti‐rabbit IgG (Santa Cruz Biotechnology) at 37℃ for washing and incubation for 2 h. Target protein expression levels were detected using an ECL kit (Thermo Fisher Scientific) and a bioimaging system (Bio‐Rad). WB analysis and IP were performed with the following antibodies: Myc‐tag, LATS1, YAP, P‐YAP, CTGF, β‐catenin, C‐myc, CyclinD1, MMP7, ZO‐1, N‐cadherin, E‐cadherin, vimentin, Snail, Slug, active β‐catenin, P‐β‐catenin (Cell Signaling Technology Inc. 1 μg/IP, 1:1000/WB); GAPDH (Sigma, 1:1000/WB); KCTD11 (Sigma, 1 μg/IP,1:1000/WB); LaminB1 (Abcam, 1:1,000/WB); and Tubulin (Abcam,1:1,000/WB).
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8

Protein Expression Analysis of TGF-β Pathway

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Tissues and cells were lysed in the lysis buffer (Beyotime, Beijing). Total proteins were transferred onto polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA) after separation by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE). Membranes were probed with rabbit monoclonal antibodies against TGF-β, Smad2/3, phospho-Smad2/3 (p-Smad2/3), vimentin, E-cadherin, MMP2, MMP-9, TIMP-1 (1: 1,000), and COL6A3 (1: 200, Abcam, Cambridge, MA, USA), and anti-bodies against GAPDH was used as a control, then with goat anti-rabbit secondary antibody. Blots were detected using a Bio-Rad Bioimaging system (Bio-Rad, Hercules, CA, USA). All experiments were performed 3 times.
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9

Western Blot Analysis of NLRP3, Caspase-1

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Western blot analysis was conducted to determine NLRP3, cleaved caspase‑1 and GAPDH levels. Antibodies against NLRP3 (#15,101, 1:1,000), cleaved caspase‑1 (#4199, 1:1,000) and GAPDH (#5174, 1:1,000) were provided by Cell Signaling Technology (CST, Danvers, MA, US). Each protein’s expression was detected using Super ECL Plus Detection Reagent (Millipore) on a Bio-Imaging System (Bio-Rad, USA).
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10

SDS-PAGE Protein Separation and Western Blot

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Before SDS-PAGE, samples were diluted 1:1 in double-strength sample buffer and heated for 10 min at 100°C. SDS-PAGE was performed on 14%, 12% or 8% polyacrylamide gels in a discontinuous buffer system. Proteins separated on gels were stained with Coomassie brilliant blue G250 or transferred to nitrocellulose membranes. These membranes were then blocked with PBS supplemented with 0.1% (v/v) Tween 20 and 1% (w/v) nonfat dried milk (PBS-T-M). Next, the membranes were incubated with the primary antisera, and subsequently with horseradish peroxidase-conjugated goat anti-rabbit IgG or anti-mouse IgG antibodies (Biosource International). All incubations were performed for 1 h and followed by three washes for 15 min with PBS-T-M. Blots were developed with the Pierce ECL Western blotting substrate. The luminescence on the blot was detected with a bioimaging system (Bio-Rad), and the apparent molecular weight of the bands of interest was assigned using Image Lab software.
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