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Flash 4.0 camera

Manufactured by Hamamatsu Photonics
Sourced in Japan

The Flash 4.0 camera is a high-speed imaging device designed for scientific and industrial applications. It captures images at a rate of up to 10,000 frames per second, allowing for the detailed analysis of fast-moving events. The camera features a CMOS image sensor with a resolution of 1,280 x 1,024 pixels and a dynamic range of 12 bits. It is capable of capturing images with exposure times as short as 100 nanoseconds, making it suitable for applications where temporal resolution is critical.

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28 protocols using flash 4.0 camera

1

Live-cell imaging of taxol-treated HCT-116 cells

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For phase-contrast live-cell imaging, HCT-116 cells (siRNA-mediated depleted) were seeded at low density in 12-well plates with RPMI-1640 supplemented with 10% of FBS, and in the following day taxol was added before imaging. Controlled by the software LAS X, phase-contrast images were acquired every 15 min for 72 h at 37°C with 5% CO2, on a Leica DMI6000 Timelapse microscope (Leica Microsystems, Germany), equipped with a Hamamatsu FLASH4.0 camera (Hamamatsu, Japan), using the objective HCX PL FLUOTAR L 20x/0.40 CORR Ph1 (Leica Microsystems, Germany). Images were analyzed in ImageJ software.
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2

Contractile Responses of Collecting Lymphatics

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An arcade of mesentery was excised, placed in 4 °C Krebs buffer and shipped overnight to the University of Missouri. Viability was not impaired if vessels were studied within 36 hours30 (link). Upon arrival, collecting lymphatics were dissected from the mesenteric fat, cleaned, cannulated on micropipettes, and studied under controlled pressure conditions at 37 °C27 (link). Contractile responses were assessed in standard Krebs buffer, first under bright field illumination and then under fluorescence illumination. The latter protocols used an Olympus IX81 microscope equipped with a Yokagawa spinning disk, using 488 nm laser excitation and emission detection at 530 nm emission; images were collected in Metamorph using a Hamamatsu Flash 4.0 camera (30 fps). Diameter was measured by edge detection Valve closure tests were performed as described previously36 (link) after 20 min equilibration in calcium-free Krebs to block contractions; under those conditions valve position was determined exclusively by external adjustment of the input (Pin) and output (Pout) pressures.
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3

Quantifying Crypt Area in Organoid Images

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Images for crypt area quantification were acquired with Nikon Eclipse TI equipped with a Yokagawa CSU W1 spinning disk and a Hamamatsu Flash 4.0 camera. 3D DAPI images were acquired via a 4× 0.2 NA air objective with 405 nm excitation and a standard DAPI emission filter. Images were collected with 50-micron spacing in the z dimension. Crypt segmentation was performed in Fiji (Schindelin et al., 2012 (link)) by first maximum projecting whole well images and then Gaussian blurring with a standard deviation of 4 pixels. Next, we subtracted a 100-pixel radius rolling background. Next, we thresholded the image at 2.5% of the maximum DAPI intensity and filled the holes in the resulting objects. Finally, we filtered out objects with an area less than 750 pixels to avoid noise and contaminants. Some organoids were very close to each other and were not successfully separated by the above algorithm. Those organoid masks were separated by drawing a dark line between them. Finally, the areas of the organoids were measured as the number of pixels contained within each mask.
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4

Imaging Intact Eye Lens in Fish

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Lens imaging was performed as previously described 75 . Briefly, whole intact eyes were dissected from live, anesthetized fish larvae and examined under DIC illumination on Zeiss AxioImager.Z1 equipped with 20X/0.80 Plan Apochromat objective and Flash4.0 camera (Hamamatsu). For transmitted light imaging, lens was further dissected from eye and image was acquired by AxioCam HRc (Zeiss) camera on AxioImager.Z1equipped with 20X/0.80 Plan Apochromat objective.
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5

Quantifying Pancreas Cell Mass

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Isolated pancreata were isolated 10 weeks after surgery (age: 32 weeks) and were fixed in 10% (vol/vol) buffered formalin and embedded in paraffin wax within 24 h of removal. Slides (5 μm) were submerged sequentially in Histoclear (Sigma, UK) followed by washing in decreasing concentrations of ethanol to remove paraffin wax. Permeabilised pancreatic slices were blotted with ready-diluted anti-guinea pig insulin (Agilent Technologies, USA) and anti-mouse glucagon (Sigma, UK) primary antibody (1:1000). Slides were visualised by subsequent incubation with Alexa Fluor 488 (1:1000) and 568-labelled donkey anti-guinea pig and anti-mouse antibody (1:1000). Samples were mounted on glass slides using VectashieldTM (Vector Laboratories, USA) containing DAPI. Images were captured on a Zeiss Axio Observer.Z1 motorised inverted widefield microscope fitted with a Hamamatsu Flash 4.0 Camera using a Plan-Apochromat 206/0.8 M27 air objective with Colibri.2 LED illumination. Data acquisition was controlled with Zeiss Zen Blue 2012 Software. Fluorescence quantification was achieved using ImageJ (https://imagej.nih.gov/ij/). Whole pancreas was used to quantitate cell mass.
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6

Microscopy Imaging of Dcp1/Dcp2 Phase Separation

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Microscopy images were collected on an inverted widefield fluorescence Nikon Ti-E microscope equipped with a Hamamatsu Flash4.0 camera using PlanApo 20x or 40x air objectives. Samples were imaged in a Greiner Bio-One 384-well glass bottom plate PEGylated using 20 mg/mL PEG-Silane (Laysan Bio, MPEG-SIL-5000) and passivated with 100 mg/mL BSA as described51 (link). Prior to addition of samples, the wells were washed 3x with 25 mM HEPES pH 7.5, 150 mM NaCl, 1 mM DTT. Dcp1/Dcp2 constructs assayed for phase separation by microscopy were prepared by initiating removal of the N-terminal MBP solubility tag with 1:40 molar equivalent TEV:Dcp1/Dcp2. Dcp1/Dcp2/Edc3 droplets were prepared by incubating Dcp1/Dcp2 and Edc3 prior to removal of the N-terminal MBP tag from Dcp1/Dcp2ext. Imaging was performed after 30 minutes to ensure TEV cleavage and droplet. Image analysis was performed using ImageJ52 (link). For localization and enrichment of Dcp1/Dcp2ext, Edc3, or RNA in droplets, 1%–5% protein concentration was fluorescently labelled. Enrichment was estimated from the average ratio of intensity in at least twenty droplets (Idroplet) to average intensity in surrounding solution (Idilute).
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7

Characterizing Droplet Fusion Dynamics

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Brightfield images were collected on a Nikon Ti-E inverted microscope equipped with a PlanApo 40x air objective and Hamamatsu Flash4.0 camera. For wild-type Dcp1/Dcp2ext, time lapse images were collected every one second while images for Dcp1/Dcp2ext(Y220G) were collected at either one second or 15 second intervals. Fusion events were analyzed in ImageJ by drawing an ellipse around droplets of similar size at each time point and measuring the long and short axis. The aspect ratio (long/short axis) was plotted as a function of time in Prism 9 (GraphPad) to determine the time of fusion, τ. Plotting τ as a function of initial length ((llonglshort)•lshort)1/2 gives a linear relationship where the slope represents the inverse capillary action—the ratio of condensate viscosity to surface tension (η/γ)59 (link).
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8

Imaging Intact Eye Lens in Fish

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Lens imaging was performed as previously described 75 . Briefly, whole intact eyes were dissected from live, anesthetized fish larvae and examined under DIC illumination on Zeiss AxioImager.Z1 equipped with 20X/0.80 Plan Apochromat objective and Flash4.0 camera (Hamamatsu). For transmitted light imaging, lens was further dissected from eye and image was acquired by AxioCam HRc (Zeiss) camera on AxioImager.Z1equipped with 20X/0.80 Plan Apochromat objective.
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9

Fluorescence Microscopy Imaging Protocols

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Cells were imaged in epifluorescence after fixation with 4% paraformaldehyde (Electron Microscopy Sciences) solution in PBS and subsequent washes with PBS. Images were acquired on a Deltavision system (Applied Precision) equipped with a 60X 1.42 numerical aperture oil objective and SoftWoRx software (Applied Precision). Deconvolution of fluorescence images using measured point-spread function was done in the SoftWoRx software, and final images were processed using FiJi32 (link) or Metamorph software.
All total internal reflection fluorescence microscopy experiments were performed on a custom-built microscope based on an Olympus IX-70 microscope, equipped with a UApoN 100× 1.49 NA oil objective, a 488-nm, 594-nm, and a 647-nm laser. The cells were imaged under azimuthal TIR-FM33 (link) using a Cairn Opto-Split III with a cube and appropriate filters and a Hamamatsu Flash 4.0 camera. Multiple colors were aligned by using calibration data obtained with 500 nm fluorescent beads (TetraSpeck Fluorescent Microspheres Size Kit, T14792, Invitrogen) mounted on a slide34 (link). The microscope was pre-warmed to 37ºC prior to imaging and temperature was maintained during imaging.
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10

Immunofluorescence Microscopy of M. xanthus

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Immunofluorescence microscopy was performed essentially as described53 (link). Briefly, M. xanthus cells were resuspended to a calculated density of 7.0 × 109 cells per ml in PBS from TPM agar plates after 6 h of starvation. Cells were fixed with 1.6% paraformaldehyde and 0.008% glutaraldehyde for 20 min on freshly prepared poly l-lysine-treated 12-well diagnostic slides (Thermo Fischer Scientific). Cells were permeabilized with GTE buffer (50 mM glucose, 20 mM Tris, 10 mM EDTA, pH 7.5) for 10 min, washed and blocked for 30 min at RT. Cells were probed with relevant rabbit polyclonal antibodies at RT for 90 min (α-Oar, dil. 1:2000) and 30 min (α-p17/p25, dil. 1:200). Alexa Fluor 594 goat anti-rabbit IgG (Thermo Fischer Scientific, cat.nr LSA11037) (dil. 1:200) was added as secondary antibody for 1 h after washing away the primary antibody. Secondary antibody was washed away followed by addition of Slow Fade Anti Fade Reagent (Molecular Probes) to each well. For each strain, at least 100 cells were analyzed. Cells were observed using a Leica DMI6000B microscope with a Hamamatsu Flash 4.0 camera. Images were recorded with Leica MM AF software package and processed with Metamorph (Molecular Devices).
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