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3 protocols using anti kim 1 af1817

1

Romidepsin and Lipopolysaccharide Interactions

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Romidepsin (FK228) (S3020), was purchased from Shanghai Selleck Chemicals Co., Ltd. (Shanghai, China). Lipopolysaccharide (LPS) derived from Escherichia coli 055: B5 (L2637) was purchased from Sigma-Aldrich (St Louis, MO, USA). Antibodies to acetyl-histone H3 (4499) were purchased from Cell Signaling Technology, Inc. (Danvers, MA, USA). Anti-KIM-1 (AF1817) was purchased from R&D Systems (Chengdu, China). Antibodies to CYP2E1 (ab28146), HDAC1 (ab7028), HDAC2 (ab12169), HDAC3 (ab7030), hepatocyte nuclear factor-1 alpha (HNF-1α) (ab96777) and Nrf2 (ab62352) were purchased from Abcam (Cambridge, UK). Anti-GAPDH (TA-08) was purchased from ZSGB Biotechnology (Beijing, China).
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2

Immunoblot Analysis of Kidney Protein Markers

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Samples of the kidney cortex and outer medulla were collected from the C57BL/6 and FGF2 mice and lysed in 2% sodium dodecyl sulfate (SDS) buffer with a protease inhibitor cocktail (Sigma) and Benzonase nuclease (EMD Millipore). The kidney lysate was used for immunoblot analysis. Protein concentration was determined using the Pierce BCA Protein Assay Kit (Thermo Fisher Scientific). Equal amounts of protein were loaded into each lane for SDS-polyacrylamide gel electrophoresis. After being transferred onto polyvinylidene difluoride membranes, the blots were incubated sequentially with a blocking buffer, primary antibodies at 4 °C overnight, and secondaryantibodies for 1 hour at room temperature. Antigens on the blots were revealed using an enhanced chemiluminescence kit (Thermo Fisher Scientific). Primary antibodies were obtained from the following sources: anti-FGF2 (ab106245), anti-Vcam1 (ab134047), antie–α-SMA (ab5694), antifibronectin (ab2413), and anti–cyclophilin B (ab16045) from Abcam; anti-FGF2 (05–118) from Millipore; anti-Kim1 (AF1817) from R&D System; anti–collagen I (NBP1–30054) from Novus Biologicals; GAPDH (#2118) and antivimentin (#3932) from Cell Signaling; and anti–β-actin (A5441) from Sigma. Secondary antibodies for immunoblot analysis were obtained from Jackson ImmunoResearch Laboratories.
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3

Immunohistochemical Analysis of Mouse Kidney

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Paraffin-embedded mouse kidney sections (3 µm thickness) were prepared by routine procedures. The sections were stained with periodic acid-Schiff (PAS) reagents by standard protocol. For immunohistochemical staining, kidney sections were deparaffinized with xylene, and then gradually rehydrated in ethanol. Hydrogen peroxide (3%) was used to eliminate endogenous peroxidase. Antigen retrieval was performed by microwave using the heat mediated antigen retrieval technique. After blocking with 1% donkey serum for 1 h, the sections were incubated with primary antibodies overnight at 4°C and subsequently washed and incubated with secondary antibodies for 1 h at room temperature. The sections were visualized by using AEC substrate Kit under an Olympus light microscope. The primary antibodies were as follows: anti-Coronavirus nucleocapsid (sc-66012; Santa Cruze Biotechnology), anti-KIM-1 (AF1817; R&D Systems), anti-p53 (A0263; Abclonal), anti-caspase-3 (A2156; Abclonal).
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