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Alexa fluor conjugated secondaries

Manufactured by Thermo Fisher Scientific

Alexa Fluor–conjugated secondaries are fluorescent-labeled antibodies used as secondary detection reagents in various immunodetection techniques, such as immunofluorescence and Western blotting. They are designed to bind to primary antibodies and provide a fluorescent signal for visualization and quantification of target proteins.

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2 protocols using alexa fluor conjugated secondaries

1

Immunofluorescence Staining Protocol for BrdU and P-cadherin

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For BrdU staining, antigen retrieval (DNA denaturation) was performed with 10mM sodium citrate (pH6) at 95 °C for 20 min, permeabilized in 0.1% Triton X-100 (T8787; Sigma) in PBS (PBST) for 3 × 10 min, then blocked with 20% goat serum (G6767; Sigma) in PBST for 30 to 60 min at room temperature. For P-cadherin staining only, 20% donkey serum (D9663; Sigma) was used instead of goat. Specimens were incubated with primary antibodies at 4 °C overnight. Primary antibodies were as follows: anti-RFP (1:500, 600-401-379; Rockland Immunochemical), goat anti-P-cadherin (1:200, AF761; R&D Systems), rabbit anti-non-muscle myosin IIB (1:200, 909901; BioLegend), and rat anti-BrdU (1:200, ab6326; Abcam). After six 1- to 2-h PBST washes, specimens were incubated at 4 °C overnight with Alexa Fluor–conjugated secondaries (Life Technology). Nuclei and F-actin were counterstained with DAPI (4′,6-diamidino-2-phenylindole; 1:5000, 62247; Thermo Fisher Scientific) and Alexa Fluor 488/635 Phalloidin (1:500, A12379, A34054; Invitrogen), respectively. Specimens were washed 6 times with PBST (1 to 2 h per wash) and then mounted on glass slides with 50% glycerol (356352; Calbiochem) in PBS. Z-stacks were acquired by a confocal microscope (TCS SP5; Leica) with oil immersion 40× and 63× objectives.
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2

Multiplex Immunostaining of Cecal Tissue

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Formalin fixed and paraffin embedded tissues were cut into 5-μm sections for Masson's trichrome (MT) staining. Cecal pathology was scored as previously described (25) . For immunostaining, tissue sections were deparaffinized, rehydrated, and underwent antigen retrieval; antibodies against type 1 collagen (ABcam), type 3 collagen (Fitzgerald), vimentin (ABcam), and desmin (Santa Cruz) were used, followed by incubation with Alexa Fluorconjugated secondaries (Life Technologies). Sections were then mounted using ProLong Gold Antifade with DAPI (Life Technologies). Optical z-stack images were captured on a Leica SP5X confocal microscope and analyzed using ImageJ.
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