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4 protocols using anti pckit

1

SCF/c-Kit Signaling Analysis Protocol

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For SCF/c-Kit signaling analysis, the cells were serum starved for 30 min and then pretreated with 4C9 antibody at the indicated concentrations for 30 min. Next, 100 ng/mL recombinant human SCF (R&D Systems, Minneapolis, MN, USA) was added and incubated for an additional 5 min. The cells were washed twice with DPBS and lysed using RIPA buffer (20 mM Tris-HCl, pH 7.6, 150 mM NaCl, 1 mM Na2EDTA, 1 mM EGTA, 1% NP-40, 1% sodium deoxycholate, 0.1% SDS, 10 mM β-glycerophosphate, 1 mM Na3OV4, 10 mM NaF, 1 μg/mL leupeptin, 1 mM PMSF, 5 μg/mL aprotinin, and 2 mM 2-mercaptoethanol). The protein extracts were subjected to SDS-PAGE and transferred onto PVDF membranes (Millipore, Burlington, MA, USA). The membranes were blocked with 1 × TBST containing 5% BSA at room temperature (RT) for 1 h and probed with the following antibodies: anti-c-Kit (R&D Systems, Minneapolis, MN, USA), anti-p-c-Kit (Tyr568/570, Tyr703, Tyr719, and Tyr823; Cell Signaling Technology, Beverly, MA, USA), anti-Erk1/2 (Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-p-Erk1/2 (Cell Signaling Technology, Beverly, MA, USA), anti-Akt (Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-p-Akt (Ser473; Cell Signaling Technology, Beverly, MA, USA), and anti-α-tubulin (generated in our laboratory).
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2

FDA-Approved Drug Library Evaluation

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The FDA-approved drug library contains 796 drugs with known bioavailability and safety profiles in humans were provided by the Lead Development and Optimization Shared Resource within the NCI-designated Cancer Center at the University of Kansas Medical Center. IM and F-AMP were purchased from the Selleckchem and dissolved in sterile water and DMSO prior to study, respectively. The following antibodies were used: anti-c-KIT, anti-p-c-KIT (Tyr719), anti-AKT, anti-p-AKT (Ser473) anti-p-AKT (Thr308), anti-ERK1/2, anti-p-ERK1/2 (Thr202/Tyr204), anti-cleaved caspase 3 (Cell Signaling technology); anti-β-actin (Sigma); and anti-Ki 67 (Dako).
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3

Antibody Generation and Validation

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The ATR antibodies ATR-pS435 and ATR-S435 were generated against the peptides CPKRRR(pS or S)SSLNPS (Amsbio). Commercially available antibodies used were anti-[6-4]-PP (Cosmo.bio), anti-CPD (Kamiya), anti-XPA (Kamiya), anti-FLAG (Sigma-Aldrich), anti-pp38(Cell Signaling), anti-pcKit (Cell Signaling), and anti-pCREB (Cell Signaling).
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4

Antibody Generation and Validation

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The ATR antibodies ATR-pS435 and ATR-S435 were generated against the peptides CPKRRR(pS or S)SSLNPS (Amsbio). Commercially available antibodies used were anti-[6-4]-PP (Cosmo.bio), anti-CPD (Kamiya), anti-XPA (Kamiya), anti-FLAG (Sigma-Aldrich), anti-pp38(Cell Signaling), anti-pcKit (Cell Signaling), and anti-pCREB (Cell Signaling).
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