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2 protocols using anti cd107a buv395 h4a3

1

Multiparametric Flow Cytometry of MAIT Cells

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Cell surface and intracellular staining was performed as previously described (15 (link), 47 (link)). Antibodies used: anti-CD3 Bv650 (OKT3, Biolegend), anti-CD3 FITC (SK7, BD Biosciences), anti-Vα7.2 PE (3C10, Biolegend), anti-CD161 Pe-Cy5 (DX12, BD Biosciences), anti-CD4 Bv711 (OKT4, Biolegend), anti-CD8 Bv570 (RPA-T8, Biolegend), anti-CD69 BUV737 (FN50, BD Biosciences), anti-CD107a BUV395 (H4A3, BD Biosciences), anti-GzB FITC (GB11, Biolegend), anti-IFNγ APC (25723.11, BD Biosciences), anti-TNF PE-Cy7 (Mab11, BD Biosciences), anti-IL17A Bv421 (BL168, Biolegend), anti-RORγt APC (R&D system), anti-RORγt Bv650 (Q21–559, BD Biosciences), anti-PLZF PECF594 (R17–809, BD Biosciences), anti-T-bet Bv711 or Bv605 (4B10, Biolegend), anti-MR1 (26.5, Biolegend), anti-HLA-DR (L243, Biolegend), anti-HLA-A2 (BB7.2, Biorad), LIVE/DEAD Fixable Aqua and Near-IR dye (Invitrogen). Flow cytometry data was acquired on BD LSRFortessa or BD Symphony A5 instruments (both BD Biosciences) and analyzed using FlowJo software v. 10.5.3 (TreeStar). Analyses of MAIT cell polyfunctionality were performed using the SPICE software v. 6.0 (48 (link)).
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2

NK Cell Degranulation and Cytokine Assay

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NK cells were cultured overnight with 100 IU/ml of IL-2 (Proleukin, Novartis Pharmaceuticals) or non-stimulated (resting) in 0.1 million cells/well before addition of 0.1 million K562 cells/well. Anti-CD107a-BUV395 (H4A3, BD Biosciences) was added to measure the degranulation. After 4 h-incubation, cells were stained with anti-CD56-BV711 (NCAM 16.2, BD Biosciences), anti-NKG2A-PE (Z199), anti-KIR2DL1/S1-PE-Cy7 (EB6B), anti-KIR2DL2/L3/S2-PE-Cy5.5 (GL183; all Beckman Coulter) and anti-KIR3DL1-APC (DX9, Biolegend). Gating strategy is shown in Supplementary Fig. 1.
In intracellular cytokine assays, 50 000 NK cells/well were cultured and stimulated overnight, using same conditions as in degranulation assays. A five-hour co-culture with 50 000 K562 cells/well at 37 °C was performed, adding Brefeldin A (GolgiPlug, BD Biosciences) after one hour. The cells were stained with the same antibody panel as mentioned above, followed by fixation and permeabilization with BD Cytofix/Cytoperm (BD Biosciences). At the end, cells were stained with anti-IFNγ-BUV395 (B27) and anti-TNFα-AF488 (Mab 11; both BD Biosciences).
Stained samples were analyzed using a five laser BD LSR Fortessa SORP instrument. Data was analyzed using FACSDiva (v.8.0.1 or later) and FlowJo (v.10.8.1) software (BD Biosciences).
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