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7 protocols using da gal4

1

Drosophila Manf Overexpression Study

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Fly stocks and crosses were maintained at 25°C. The following fly lines were used in the study: w, UAS-DmManf133 (line L3), UAS-DmManf135 (line L5) and DmManfΔ96/TM6 Tb Sb EYFP [14 (link)], 69B-GAL4 (Bloomington Drosophila Stock Center (BDSC) #1774) [31 (link)], da-GAL4 (BDSC #5460) [32 (link)], MS1096-GAL4 (BDSC #8860) [33 (link)], tub-GAL4/TM6 Tb Sb EYFP (BDSC #5138) [34 (link)], UAS-mCD8-GFP (BDSC #5130) [34 (link)], UAS-Hsc3 (BDSC #5843) [35 (link)]. T(2;3)SM6a-TM6B Tb translocation balancer (originating from pnutXP/T(2;3)SM6a-TM6B Tb, BDSC #5687) was used in viability studies (referred as SM6-TM6). UAS-RNAi lines (listed in S1 Table) were obtained from BDSC [36 (link)] and Vienna Drosophila RNAi Center [37 (link)]. Adult flies were imaged with ProgRes SpeedXT camera (Jenoptik). Genes were annotated according to Flybase [38 (link)].
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2

Drosophila Genetic Toolkit: Diverse Strains

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All fly stocks were maintained at 25 °C on standard medium unless otherwise stated. The following stains were used in this study: w1118 (BDSC BL6326), Act-Gal4 (BDSC BL3954), Da-Gal4 (BDSC BL55851), Ub-Gal4 (BDSC BL32551), Caudal (Cad)-Gal4 (BDSC BL3042), R4-Gal4 (BDSC BL33832), ElaV-Gal4 (BDSC BL458), Mhc-Gal4 (BDSC BL38464), Hsp70-Gal4 (BDSC BL2077), Escargot-Gal4 (Kyoto DGRC 114-042), Prospero-Gal4 (BDSC 80572), UAS-dSLC5A5RNAi (BDSC BL63568), UAS-dSLC5A5RNAi (VDRC 40650), and UAS-shibireRNAi (BDSC BL28513). The MyoIA-Gal4 fly line is a gift from Dr. Bruce Edgar (University of Utah, Salt Lake City, UT, USA). The dSLC5A5-FLAG clone (UFO11244) was obtained from the Drosophila Genomics Resource Center (DGRC) and contains full-length dSLC5A5 cDNA with a C-terminus FLAG HA tag in a pUAST vector. UAS-dSLC5A5-FLAG transgenic flies were generated by BestGene Inc. (Chino Hills, CA, USA). For each cross, the Gal4 or UAS-RNAi progenies derived from the cross are used as controls.
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3

Drosophila Genetic Manipulation Protocol

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The following Drosophila melanogaster lines were used in this study: Oregon-R (Bloomington Drosophila Stock Center (BDSC) #6362), da-Gal4 (BDSC#55851), UAS-GFP RNAi (BDSC#9330), UAS-Ada2b RNAi (National Institute of Genetics, Japan (NIG) #9638R-3), white1118 (w) mutant (BDSC#3605), hmlΔ-Gal4 UAS-2XEGFP (BDSC#30140), and Ada2bd272 mutant (a gift from Dr. N. Zsindely, University of Szeged) [24 (link),25 (link)] lines. To knock down Ada2b ubiquitously, the da-Gal4 line was crossed with the UAS-Ada2b RNAi line. The resulting progenies (da-Gal4, UAS-Ada2b RNAi; designated as da > Ada2b RNAi) were used for the experiment. The progenies resulting from the cross of da-Gal4 and UAS-GFP RNAi lines were used as controls (da-Gal4, UAS-GFP RNAi; designated as da > GFP RNAi). To knock down Ada2b in hemocytes, the hmlΔ-Gal4 line was used in a similar way. The Ada2b mutant heterozygotes (Ada2bd272/+) were obtained by crossing the w line with the w; Ada2bd272/TM6 line. The siblings (TM6/+) of this cross were used as controls. Flies were reared on standard corn meal medium at 25°C.
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4

Drosophila Mitochondrial Dysfunction Modeling

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Fly stocks were raised on standard cornmeal medium and kept at 23 °C, 70% humidity on a 12:12 hours light/dark cycle. Strains used in this study were obtained from Bloomington Drosophila Stock Center (BDSC) and Vienna Drosophila Resource Center (VDRC). Genotypes used in this study were: act5c-gal4 (BDSC 4414), da-gal4 (BDSC 8641), UAS-Ndufs4 RNAi (VDRC 101489), UAS-Bcs1 RNAi (BDSC 51863), UAS-Coa8 RNAi (VDRC 100605). Control strains were obtained in each experiment by crossing the specific gal4 driver line with the genetic background flies w1118. Coa8 KO flies were generated by Wellgenetics Inc by using CRISPR/Cas9 technology, generating a 676 bp deletion, from the –49th nucleotide relative to ATG to the –34th nucleotide relative to the stop codon of Coa8.
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5

Drosophila Genetic Manipulation Protocols

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All flies were maintained at 25 °C on standard laboratory medium as described previously55 (link). The following stocks were obtained from the Bloomington Drosophila stock center (BDSC): w1118 (wild-type; BDSC 5905), act5c-GAL4 (BDSC 3954), da-GAL4 (BDSC8641), elav-GAL4 (BDSC 458), elav-GAL4; UAS-dcr-2 (BDSC 25750), P{CaryP} attP2 (BDSC 36303), UAS-tra2 RNAi #1 (BDSC 56912), UAS-tra2 RNAi #2 (BDSC 28018), UAS-traF (BDSC 4590), UAS-msl-2 RNAi #1 (BDSC 31627), UAS-msl-2 RNAi #2 (BDSC 35390), UAS-Sxl RNAi #1 (BDSC 34393), UAS-Sxl RNAi #2 (BDSC 38195), Sxlf7,M1; P{Sxl. + tCa}9A/ + (BDSC 58486), and SxlM1,fΔ33/Binsinscy (BDSC 58487). Three gene-switch Gal4 driver lines—act5c-GS-GAL4, S106-GS-GAL4, and 5961-GS-GAL4—were kindly gifted by Dr. Akagi56 (link).
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6

Drosophila and Shrimp Maintenance Protocols

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All flies were maintained at 25 ± 0.5°C and 80 ± 5% humidity under 12 h of light/dark cycles on cornmeal-sucrose-yeast agar media. w1118 flies were used as wild-type controls. Fly lines were obtained from the Bloomington Drosophila Stock Center (BDSC) and the Vienna Drosophila Resource Center (VDRC). The following stocks were used:
y1 w67c23 (BDSC 6599),
da-Gal4 (BDSC 5460),
w1118 (BDSC 3605),
UAS-wsv056,
tub-GAL80ts,
CG12116 RNAi (VDRC 6498), and
CG12117 RNAi (VDRC 17017).
Pacific white shrimp L. vannamei of approximately 4–5 g body weight were bought from a commercial farm (Zhanjiang, Guangdong Province, China). Before the experiment, shrimp were acclimated for 1 week in aerated artificial seawater with water salinity, with temperature maintained at 29–31 g/L and 24–26°C. Shrimp were fed with commercial feed three times a day at the rate of 5% body weight. PCR with WSSV-specific primers (Table 1) was performed to ensure that the shrimp were free of WSSV before experiments.
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7

Drosophila Stocks for Sex Determination

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All flies were maintained at 25°C on standard laboratory medium as described previously [42] (link). The following stocks were obtained from the Bloomington Drosophila stock center (BDSC): w 1118 (wild-type; BDSC 5905), act5c-GAL4 (BDSC 3954), da-GAL4 (BDSC8641), elav-GAL4 (BDSC 458), elav-GAL4; UASdcr-2 (BDSC 25750), P{CaryP} attP2 (BDSC 36303), UAS-tra2 RNAi #1 (BDSC 56912), UAS-tra2 RNAi #2 (BDSC 28018 ), UAS-traF (BDSC 4590), UAS-msl-2 RNAi #1 (BDSC 31627), UAS-msl-2 RNAi #2 (BDSC 35390), UAS-Sxl RNAi #1 (BDSC 34393), UAS-Sxl RNAi #2 (BDSC 38195), Sxl f7,M1 ; P{Sxl.+tCa}9A/+ (BDSC 58486), and Sxl M1,fΔ33 /Binsinscy (BDSC 58487). Three gene-switch Gal4 driver lines, act5c-GS-GAL4, S106-GS-GAL4, and 5961-GS-GAL4, were a kind gift from Dr. Akagi [43] (link).
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