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Rnapure tissue cell kit dnase 1

Manufactured by CWBIO
Sourced in China

The RNApure Tissue & Cell Kit (DNase I) is a tool designed for the purification of RNA from various biological samples, including tissues and cells. The kit includes a DNase I component to facilitate the removal of DNA contamination during the RNA extraction process.

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4 protocols using rnapure tissue cell kit dnase 1

1

Quantification of LUCAT1 and KRAS Expressions

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Total RNA extracted from cells and tissues using the RNAPure Tissue & Cell Kit (DNase I) in accordance with the manufacturer's instructions (CWBIO, Beijing, China). Then, a total of 1 μg RNA was submitted to the reverse transcription of miRNA and mRNA using stem-loop primers and random primers with TaKaRa system (Dalian, China) according to the manufacturer's instructions. Subsequently, the RT-PCR was carried out using a TaqMan Universal Master Mix II kit on a Bio-Rad detection system (Bio-Rad, Hercules, CA). GAPDH and U6 expression levels are served as internal references to normalize mRNA and miRNA expressions, respectively. Primers were listed as follows.
LUCAT1: forward- (F-) 5′-CCTCACAAGAAGCTCACCCA-3′, reverse- (R-) 5′-CAGCATGTAGCCCATGGTAGA-3′; KRAS: F-5′-TAGGCAAGAGTGCCTTGACG-3′, R-5′-CCCTCCCCAGTCCTCATGTA-3′; and GAPDH: F-5′-CCACTAGGCGCTCACTGTTCTC-3′, R-5′-ACTCCGACCTTCACCTTCCC-3′. If the expression was lower than the median value, miR-181c-5p was considered as the low expression and vice versa. Similarly, LUCAT1 was considered to express at a high level when its expression was higher than the median value and vice versa.
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2

Quantifying CD47 Expression via RT-PCR

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The total RNAs were extracted from cells using the RNApure Tissue & Cell Kit (DNase I) in accordance with the manufacturer’s instructions (CWBio, Beijing, China). Then, a total of 1 μg RNA from each sample was subjected to cDNA reverse transcription and real-time PCR (RT-PCR) using the Quant One Step RT-PCR kit (TIANGEN, Beijing, China) on Bio-Rad detection system (Bio-Rad, Hercules, CA) after RNA quantification via using an ND-1000 NanoDrop Spectrophotometer (NanoDrop Technologies, Inc., Wilmington, Delaware). GAPDH expression level serves as an internal reference. Primers were listed as follows,
CD47: forward (F) 5′-CGGCGTGTATACCAATGC-3′; Reverse (R) 5′-TTTGAATGCATTAAGGGGTTCCT-3′;
GAPDH: F 5′-CCACTAGGCGCTCACTGTTCTC-3′; R 5′-ACTCCGACCTTCACCTTCCC-3′.
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3

HDAC1 mRNA Expression Analysis

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Total RNA was extracted from tissues and cells using the RNApure Tissue & Cell Kit (DNase I) according to the manufacturer's instructions (CWBio). The RNA samples were then subjected to cDNA synthesis and qPCR using the SuperRT One Step RT-PCR Kit (CWBio) on a Bio-Rad detection system (Bio-Rad Laboratories, Inc.). β-actin expression was used to normalize the mRNA levels of HDAC1, which were calculated using the 2−∆∆Cq method (24 (link)). The qPCR thermocycling conditions were as follows: Initial denaturation at 95°C for 30 sec, followed by annealing and elongation for 40 cycles of 95°C for 15 sec, 60°C for 30 sec and 72°C for 30 sec, and a final extension at 72°C for 2 min. Primers targeting HDAC1 and β-actin were obtained from Invitrogen (Thermo Fisher Scientific, Inc.), the sequences of which are as follows: HDAC1 forward, 5′-TGCTAAAGTATCACCAGAGGGT-3′ and reverse, 5′-TGGCCTCATAGGACTCGTCA-3′; and β-actin forward, 5′-ACAGAGCCTCGCCTTTGCC-3′ and reverse, 5′-CACACTTGGCGTGTCCTTTG-3′.
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4

Gene Expression Analysis by qPCR

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RNA samples were isolated using an RNApure Tissue & Cell Kit (DNase I) (CW0560S, CWBIO, China). Reverse transcription was performed using a PrimeScript RT Reagent Kit (RR047A, Takara, Japan). Quantitative PCR was performed using the SYBR Green PCR Master Mix (RR820A, Takara, Japan) on a StepOnePlus System (Applied Biosystems). The 2−ΔΔCT method was used to determine fold changes in gene expression levels, with normalization to glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA expression as an internal control. Supplementary Table 1 provides the primer sequences used in this study. Each PCR was conducted in triplicate.
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