The largest database of trusted experimental protocols

Q exactive plus orbitrap ms system

Manufactured by Thermo Fisher Scientific

The Q Exactive Plus™ Orbitrap MS system is a high-resolution mass spectrometer that utilizes Orbitrap technology for accurate mass measurements. It provides high-quality data and efficient performance for a variety of analytical applications.

Automatically generated - may contain errors

2 protocols using q exactive plus orbitrap ms system

1

Compound Identification and Target Prediction

Check if the same lab product or an alternative is used in the 5 most similar protocols
Compounds of HMMCR were analyzed using liquid chromatography–mass spectrometry (LC-ESI-MS/MS) system (UHPLC, Thermo Fisher U3000 ultrahigh performance liquid chromatograph; MS, Thermo Scientific Q Exactive Plus™ Orbitrap MS system). The identification of unknown compound was performed by Compound discover 3.1, with mzcloud and mzVault databases. SwissTargetPrediction (http://www.swisstargetprediction.ch/), a public database for ligand-based target prediction of small biologically active molecule, was used to predict the potential targets of HMMCR. We transformed each compound identified by LC-ESI-MS/MS into canonical SMILES through the PubChem (https://pubchem.ncbi.nlm.nih.gov/). Subsequently, these SMILES were imported into SwissTargetPrediction to predict targets of compounds. Species were selected as “Homo sapiens” with probability >0 as the screening condition.
+ Open protocol
+ Expand
2

Metabolite Analysis by High-Resolution Mass Spectrometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mass spectrometry
analysis was carried out with a high-resolution Q Exactive Plus Orbitrap
MS system connected to a Dionex Ultimate 3000 UHPLC system (Thermo
Fisher Scientific, Waltham, MA). MV and its metabolites were separated
on the UPLC system equipped with a Hypersil GOLD C18 column (100 ×
2.1 mm2, 1.9 μm; Thermo Fisher Scientific, Waltham,
MA). The mobile phase was 0.1% formic acid (v/v, solvent A) and methanol
(solvent B) with an injection volume of 5 μL, and the flow rate
was 0.35 mL/min. The gradient process was as follows: 0–1 min,
2% solvent B (held for 1 min); 1–9 min, from 2 to 98% solvent
B; and 9–12 min, 98% solvent B (held for 3 min). The column
oven was set to 35 °C. The electrospray ionization (ESI) parameters
were set as follows: spray voltage, 3 kV; capillary temperature, 320
°C; sheath gas flow rate, 40 L/h; aux gas flow rate, 10 L/h;
and scan range, m/z 133.4 to 2000.
Ionization was conducted in the negative-ion mode. All data obtained
were analyzed by Compound Discovery software (Thermo Fisher Scientific,
Waltham, MA), and the results were compared with those of a previous
data set.49 (link)
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!