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6 protocols using anti cd56 microbeads

1

Isolation of Immune Cell Subsets

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PBMCs were sorted into cellular subpopulations by positive selection using anti-CD14 microbeads to isolate monocytes, anti-CD4 microbeads for CD4+ T cells, anti-CD8 microbeads for CD8+ T cells and anti-CD19 microbeads for B cells with either LS columns or an AutoMACS Pro (Miltenyi Biotec). NK cells were isolated by either positive selection using anti-CD56 microbeads (Miltenyi Biotec) or negative selection using the NK cell isolation kit (Miltenyi Biotec) or with the EasySep Human NK cell enrichment kit (Stem Cell Technologies, Grenoble, France) following the manufacturer’s instructions.
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2

PBMC Isolation and Cell Sorting

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Peripheral blood mononuclear cells (PBMC) were freshly isolated by Ficoll (GE Healthcare Biosciences) as described previously [37 (link)]. PBMC subpopulations were sorted with anti-CD4, anti-CD8, anti-CD14, anti-CD19, and anti-CD56 MicroBeads (Miltenyi Biotec) with an autoMACS Pro Separator (Miltenyi Biotec) according to manufacturer’s instructions. The purity of sorted cells was checked by flow cytometry with the following antibodies: anti-CD4 APC-H7 (clone SK3, BD Biosciences), anti-CD4 ECD (clone SFCI12T4D11, Beckman Coulter), anti-CD8 FITC (clone RPA-T8, BD Biosciences), anti-CD11c APC (clone B-ly6, BD Biosciences), anti-CD14 PB (clone M5E2, BD Biosciences), anti-CD19 PE (clone HIB19, eBioscience), and anti-CD56 PE-Cy7 (clone NCAM16.2, BD Biosciences) on a LSRII flow cytometer (BD Biosciences). We did not pursue the proposed experiments if the purity of sorted cells was less than 90 %. Analyses were performed using FlowJo software (Treestar).
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3

Isolation and Culture of Uterine Natural Killer Cells

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The uNK cells were isolated as previously described [15 (link), 16 (link)]. Briefly, the decidual tissues were extensively washed with Ca2+- and Mg2+-free Hank's balanced salt solution (HBSS) containing antibiotics, minced thoroughly between two scalpels into fragments of 1-2 mm3, and digested for 1 h at 37°C with gentle agitation in HBSS with 0.1% (w/v) collagenase I (Gibco, USA). The cell suspensions were layered over Ficoll-Hypaque medium (General Electric, USA) and centrifuged at 800 ×g and room temperature for 25 min. The cells at the interface were washed twice with Roswell Park Memorial Institute (RPMI)-1640 media with 10% fetal calf serum (FCS) and antibiotics. After incubation for 20 min at 4°C with anti-CD56 microbeads (Miltenyi Biotec, Ltd., Germany), the cells were washed with washing buffer (PBS, 2 mM EDTA, and 0.5%BSA (w/v)) and then loaded onto a MiniMACS Separator (MS) column in a MiniMACS magnet (Miltenyi Biotec, Ltd., Germany). After flushing the MS column three times, the CD56+ cells were flushed as indicated by the manufacturer. The purity of the uNK cells was >90% CD56+CD3 according to the flow cytometric analysis. The uNK cells were cultured in RPMI 1640 media with 1% FCS and IL-15 (10 ng/mL) (R&D systems, USA), in which to maintain the viability of the purified uNK cells [17 (link)].
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4

Isolation and Characterization of NK Cells

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NK cells were isolated from peripheral blood of HCC patients or buffy coats of healthy individuals. PBMCs were collected by density gradient centrifugation using Ficoll-Paque Plus. NK cells were then sorted from PBMCs by negative selection with anti-CD3 using magnetic cell sorting prior to positive selection with anti-CD56 microbeads according to the manufacturer's instructions (Miltenyi Biotec, Bergisch Gladbach, Germany). The isolated NK cells were cultured in RPMI 1640 with 10% FBS and subjected to characterization and functional assays.
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5

Isolation and Culture of uNK Cells

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uNK cells were purified as previously described (2 (link)). Briefly, decidual tissues were thoroughly washed with Ca2+- and Mg2+-free Hank’s balanced salt solution (HBSS) containing 100 U/ml penicillin and 100 g/ml streptomycin (Sigma-Aldrich, St. Louis, MO, USA), cut into fragments of 1–2 mm3 using two scalpels and digested for 1 h at 37°C with gentle agitation in HBSS with 0.1% (w/v) collagenase I (Gibco-BRL, Carlsbad, CA, USA). Cell suspensions were layered over Ficoll-Hypaque medium (General Electric, Fairfield, CT, USA) and centrifuged at 800 × g for 25 min. Cells at the interface were washed twice in RPMI-1640 media with 10% fetal calf serum (FCS) and antibiotics. Following incubation for 20 min at 4°C with anti-CD56 micro beads (Miltenyi Biotec GmbH, Bergisch Gladbach, Germany), cells were washed in washing buffer [phosphate-buffered saline (PBS), EDTA 2 mM and 0.5% bovine serum albumin(w/v)] and loaded onto a manual cell separation (MS) column in a MiniMACS magnet (MiniMACSTM Separator System; Miltenyi Biotec GmbH). The MS column was flushed three times and CD56+ cells were flushed according to the manufacturer’s instructions. The purity of the uNK cells was >90% CD56+CD3 according to flow cytometric analysis. The uNK cells were cultured in RPMI-1640 media with 1% FCS and 10 ng/ml IL-15 (R&D Systems Inc., Minneapolis, MN, USA).
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6

NK Cell Purification and Functional Assay

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For separation of NK cells, anti-CD56 microbeads, columns, and filters were purchased from Miltenyi Biotec (Bergisch Gladbach, Germany). For purity analysis of NK cells, anti-CD56 monoclonal antibody (TULY 56)-FITC and anti-CD3 monoclonal antibody (UCHT1)-PE together with their relevant mouse IgG1-kappa isotype controls were purchased from eBioscience (California, United States). For stimulation of NK cells, human interleukin-2 (IL-2) recombinant protein and cell stimulation cocktail (×500) were purchased from eBioscience (California, United States). Blocking antibodies, anti-PD-1 (EH12-27) and anti-Tim-3 (F38-2E2) and their corresponding purified IgG1-kappa isotype controls were from BioLegend (California, United States). Anti-CD107a (LAMP-1) monoclonal antibody (eBioH4A3)-PE and Annexin V-FITC Apoptosis Detection Kit with PI were purchased from eBioscience (California, United States). For cytokines measurements, human IFN-γ and TNF-α ELISA kits were obtained from eBioscience (California, United States).
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