The largest database of trusted experimental protocols

11 protocols using p akt

1

Quantitative Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The protein samples were prepared from cell lysates and resolved by SDS‐PAGE. Subsequently, protein samples were transferred to Immobilon polyvinyldifluoride membranes and blocked with 4% bovine serum albumin for 1 hour at room temperature. The blots were probed with rabbit anti‐human antibodies against candidate signal pathway proteins—pAKT (1:1000; GeneTex), AKT (1:1000; GeneTex), MMP2 (1:1000; GeneTex), and MMP9 (1:1000; Abcam)—for 2 hours at room temperature. After three washes with tris‐buffered saline containing Tween 20, the blots were subsequently incubated with a donkey anti‐rabbit peroxidase‐conjugated secondary antibody (1:3000; Cell Signaling Technology) for 1 hour at room temperature. Protein levels on the blots were detected with enhanced chemiluminescence using Kodak X‐OMAT LS film (Eastman Kodak) and quantified using a computing densitometer and ImageQuant (Molecular Dynamics).
+ Open protocol
+ Expand
2

Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
For protein extraction, 1 × 106 cells were lysed in 200 μL RIPA buffer (50 mM Tris-HCl (pH 7.5), 150 mM NaCl, 1 mM EDTA, 1% Nonidet P-40, 0.5% DOC, 0.1% SDS) containing Complete Protease Inhibitor Cocktail (Roche Applied Science, Indianapolis, IN, USA). Cell lysates were centrifuged at 14,000× g for 30 min at 4 °C, then supernatant was harvested. Proteins were quantified by use of the Bio-Rad DC Protein Assay kit (Bio-Rad Laboratories, Hercules, CA, USA), separated by 10% SDS-PAGE and transferred to PVDF membrane (Millipore, Billerica, MA, USA). Membranes were blotted with antibody for UBE2C (H00011065-M01, Abnova), mTOR (#2983, Cellsignal, Danvers, MA, USA.), p-mTOR (Cellsignal, #2971), AKT (Genetex, GTX121937), p-AKT (GTX128414, Genetex, Ivine, CA, USA), PI3K (Genetex, GTX112994), p-PI3K (Cellsignal, #4228), GAPDH (Genetex, GTX627408) and anti-β-actin (Thermofisher, #MA5-15739).
+ Open protocol
+ Expand
3

Establishment of GC Xenograft Model

Check if the same lab product or an alternative is used in the 5 most similar protocols
Male 4-5 weeks-old BALB/c nude mice (Shanghai SLAC Laboratory Animal Center, Shanghai, China) were used to establish GC xenograft model. BGC823 cells (2×106/100μl) were implanted by subcutaneous injected into the right axillary fossa of mouse. After one week, the animals were randomly divided into four groups (six mice per group) and given: (1) control (sterile physiological saline, i.p., every other day), (2) OMT (30mg/kg, i.p., every other day), (3) CDDP (5mg/kg, i.p., every other day), (4) OMT + CDDP (30mg/kg + 5mg/kg, i.p., every other day). After 24 days, mice were sacrificed and xenografts tumors were harvested and weighed. The tumor volume and inhibition ratio were tested as described before 19 (link).
The paraffin-embedded sections (5μm thick) were prepared and stained with hematoxylin and eosin (H&E) or immunohistochemically with p-AKT, p-ERK or Ki-67 (mouse anti-Ki67 antibody; GeneTex Inc, Irvine, California) according to previously reported protocols 19 (link), 20 (link).
+ Open protocol
+ Expand
4

Antibody and Kinase Inhibitor Sources

Check if the same lab product or an alternative is used in the 5 most similar protocols
Rabbit polyclonal antibodies of Hic-5, p-Src, p-AKT, and AKT were purchased from GeneTex (Irvine, CA, USA) whereas mouse monoclonal antibodies of EGFR, c-Met, Her2, Her3, p-JNK, JNK and rabbit polyclonal antibody of c-Src were from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA). Src kinase inhibitors PP1 were from Merck (Darmstadt, Germany) and dasatinib was from Tocris Bioscience (Bristol, UK).
+ Open protocol
+ Expand
5

Antibody and Inhibitor Reagents for Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Rabbit polyclonal antibodies of Hic-5, phosphorylated Src (p-Src), and AKT (p-AKT) and Ki67 were purchased from GeneTex (Irvine, CA, USA), whereas mouse monoclonal antibodies of EGFR, c-Met, Her2, Her3, phosphorylated JNK (p-JNK) and rabbit polyclonal antibody of c-Src were from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA). The Src kinase inhibitor dasatinib was from Tocris Bioscience (Bristol, UK). The glycolysis inhibitor 3-Bromopyruvate (3-BrP) was from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA).
+ Open protocol
+ Expand
6

Assessing Vascular Remodeling in Lung Disease

Check if the same lab product or an alternative is used in the 5 most similar protocols
The extent of muscularization of small arteries was assessed following immunochemistry staining for α‐smooth muscle actin (α‐SMA) (Abcam, Cambridge, UK). Meanwhile, smooth muscle cells of small lung arteries exhibiting proliferation were assessed by immunostaining with proliferating cell nuclear antigen (PCNA) (ProteinTech, Wuhan, China) and osteopontin (OPN) (ProteinTech, Wuhan, China). Furthermore, the expression of KLF4 and P‐AKT was assessed by immunostaining with antibodies against KLF4 (ProteinTech, Wuhan, China) and P‐AKT (Gene Tex, San Antonio, USA).
+ Open protocol
+ Expand
7

Western Blot Quantification of Key Signaling Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cultured cells were washed with PBS twice and then lysed in 1× Laemmli sample buffer (Bio-Rad) directly. Lysates were heated at 100 °C for 10 min and centrifuged at 14,000 rpm for 10 min before loading to the 4–15% precast gels (Bio-Rad). Samples were run under 80 V for 15 min, then switched to 130 V for another 1 h, and then transferred to PVDF membranes at 100 V for 90 min. Membranes were blocked in a 5% skim milk PBST buffer for 30 min at room temperature, followed by primary antibody incubation overnight at 4 °C. HRP-conjugated secondary antibody was then applied and incubated for 2 h at room temperature. Membranes were imaged using a ChemiDoc MP Imaging system (Bio-Rad) and organized with Image Lab software. Primary antibodies: EGFR (CST #4267S); p-EGFR (CST #3777S); AKT (CST #9272S); p-AKT (CST #4058S); PI3K (CST #4257S); p-PI3K (CST #4228S); BRAF (CST #9433S); p-BRAF (CST #2696S); MEK (CST #9126S); p-MEK (CST #9121S); ERK (CST #4695S); p-ERK (CST #4370S); CRBN (CST #71810S); VHL (CST #68547S); GAPDH (GeneTex, GTX #110118), IgG (CST #3900S).
+ Open protocol
+ Expand
8

Protein Co-Immunoprecipitation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Most chemicals used and Protein A-agarose were purchased from Sigma-Aldrich (St. Louis, MO, USA). The antibody for CCT-β was purchased from Abcam (Cambridge, MA, USA) for the co-IP assay. For western blots, the specific antibodies for GAPDH (100118), CCT-α (16399), CCT-β (112283), CCT-γ (33073), CCT-δ (33536), CCT-ε (110167), CCT-ζ (105148), CCT-η (101347), CCT-θ (115466), XIAP (111202), β-catenin (101435), P-β-catenin (S675) (132611), P-β-catenin (Ser33/Ser37/Thr41) (132605), Slug (121924), Snail (100754), Twist (127310), E-cadherin (100443), MUC1 (100459), N-cadherin (112734), MMP2 (104577), MMP9 (100458), AKT (121973), P-AKT (128414), GSK-3β (111192), P-GSK-3β (50090), Survivin (100052), NF-kB p65 (102090), fibronectin (112794), β1 (112971), Src (134412), P-Src (54701), FAK (50489), and P-FAK (129840) were from GeneTex (Irvine, CA, USA). The catalog numbers are in parentheses.
+ Open protocol
+ Expand
9

Molecular Mechanisms of CXCL1/CXCR2 Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
All chemical reagents were purchased from Sigma-Aldrich (St. Louis, MO, USA). The CXCL1, CXCR2, VCAM-1, p-FAK, FAK, p-p85α, p85α, p-Akt, Akt, p-IKKα/β, IKKα/β, p-IκBα, IκBα, p-p65, p65, and β-Actin specific anti-mouse and anti-rabbit IgG-conjugated horseradish peroxidase antibodies were purchased from GeneTex International Corporation (Hsinchu City, Taiwan). Recombinant human CXCL1 was purchased from PeproTech (Rocky Hill, NJ, USA). Short hairpin RNA (shRNA) plasmid for CXCR2 and VCAM-1 were obtained from the National RNAi Core Facility Platform (Taipei, Taiwan). All siRNAs were ON-TARGETplus siRNAs, obtained from Dharmacon Research (Lafayette, CO, USA). The NF-κB luciferase report plasmid, pSV-β-galactosidase vector, and luciferase assay kit were purchased from Promega (Madison, WI, USA).
+ Open protocol
+ Expand
10

Signaling Pathway Regulation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-mouse and anti-rabbit IgG-conjugated horseradish peroxidase, rabbit polyclonal antibodies specific for CXCL1, CXCR2, VCAM-1, p-FAK, FAK, p85α, p-p85α, Akt, p-Akt, p-IKKα/β, IKKα/β, p-IκBα, IκBα, p-p65, p65, and β-Actin were purchased from GeneTex International Corporation (Hsinchu City, Taiwan). Recombinant human CXCL1 was purchased from PeproTech (Rocky Hill, NJ, USA). Short hairpin RNA (shRNA) plasmid for knocking down gene expression was purchased from the National RNAi Core Facility Platform (Taipei, Taiwan). All siRNAs were ON-TARGETplus siRNAs, purchased from Dharmacon Research (Lafayette, CO, USA). All other chemicals were obtained from Sigma-Aldrich (St. Louis, MO, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!