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Edu dna cell proliferation kit

Manufactured by RiboBio
Sourced in China, Japan

The EdU DNA Cell Proliferation Kit is a laboratory tool used to detect and quantify cell proliferation. It allows for the measurement of DNA synthesis during the S-phase of the cell cycle. The kit provides the necessary reagents and protocols to label proliferating cells with the thymidine analog EdU (5-ethynyl-2'-deoxyuridine), which can then be detected and visualized using a fluorescent azide. This method enables the analysis of cell proliferation in various biological samples and research applications.

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28 protocols using edu dna cell proliferation kit

1

Proliferation Assays of Human Kidney Fibroblasts

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The proliferation of HKFs was assessed using a cell counting kit-8 (CCK-8) assay (Dojindo, Kumamoto, Japan) according to the manufacturer protocol (Wu et al., 2020 (link)). Briefly, HKFs were plated in a 96-well plate at a density of 3 × 103/well and incubated to 40% confluence. After transfection, 10 μL CCK-8 reagent was directly added to each well of a 96-well plate at the specified time (0 h, 24 h, 48 h, 72 h, and 96 h), and then incubated for 2 h in a dark environment. Finally, a microplate reader (BioTek Instruments, United States) was applied to measure the optional density (OD) at a wavelength of 450 nm.
The proliferation of HKFs was also measured with an EdU DNA cell proliferation kit (RiboBio, Wuhan, China). After transfection, the HKFs were incubated with a medium containing 50 μM EdU for 2 h. The HKFs were fixed with 4% paraformaldehyde for 30 min, and then the excess formaldehyde was neutralized with a 2 mg/mL glycine solution. Subsequently, the HKFs were, respectively, stained in Apollo reaction cocktail and Hoechst staining solution and then incubated for 30 min in the dark. A fluorescence microscope (IX35, Olympus, Japan) was used for capturing randomly selected areas to observe the ratio of proliferating cells (EdU positive) to the total number of cells (DAPI positive) (Bieg et al., 2019 (link)). Samples were prepared in triplicate.
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2

Quantifying Cell Proliferation with EdU Assay

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We assessed cell proliferation by detecting EdU (5′-ethynyl-2′-deoxyuridine) incorporation. EdU is a nucleotide analog of thymidine, and is incorporated into DNA only in proliferating cells. Following incubation with EdU for 2 hours, a fluorescent molecule from the kit that reacts specifically with EdU was added to visualize proliferating cells using a fluorescence microscope (Olympus). Using the EdU DNA Cell Proliferation Kit (Guangzhou Ribobio, Guangzhou, China) in accordance with the manufacturer's instruction, proliferating cell frequencies were calculated as the ratios of EdU-staining cells to Hoechst33342-staining cells counted from six fields of three separate experiments.
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3

Cell Proliferation and Viability Assay

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LOVO cells and HCT116 cells were divided into experimental group and control group, and were seeded in 96-well plates respectively. 1000 cells were seeded in 100 μL of medium per well and treated with 10 μL of CCK-8 solution (RiboBio, China). At 0, 24, 48, and 72 h of culture, cell absorbance at 450 nm was measured using a microplate reading element. The measurement procedure followed manufacturer's instructions (Synergy, USA).
We performed Cell-Light 5-ethynyl-2'-deoxyuridine (EdU) experiments to evaluate the proliferation capacity of cells using the EdU DNA Cell Proliferation Kit (RiboBio, China). A 24-well plate was used to seed 50,000 cells per well. One day after normal culture, cells were incubated with 50 mmol/L EdU solution for 2 h, then fixed with 4% paraformaldehyde. Following the manufacturer's protocol, we treated the cell lines with Apollo Dye Solution and DAPI, respectively, and finally captured and counted under an Olympus FSX100 microscope (Olympus, Japan).
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4

Measuring Cell Proliferation in HEK293T

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HEK293T cells (2500 cells/well) were seeded in triplicate in 24-well plates (Nunc) and were incubated in DMEM containing 10% bovine serum (Gibco) for 12 h at 37 °C. Four groups of cells (two groups of HEK293T cells; three wells per group) were transfected with either ADAR1 or mutant plasmids for 36 h. Next, 50 μM EdU labeling medium was added to the cell culture, followed by incubation for 2 h at 37 °C under 5% CO2 conditions; the EdU assay was performed using an EdU DNA Cell Proliferation Kit (Guangzhou Ribobio Co., Ltd., China), according to the manufacturer’s instructions. The labeled cells were fixed in 4% paraformaldehyde (pH 7.4) for 30 min and incubated with glycine for 5 min. After the cells were washed with PBS, staining with Apollo working solution was performed at room temperature for 30 min. After the cells were washed with 0.5% Triton X-100 in PBS, they were incubated with the Hoechst 33,342 dye in the dark at room temperature for 30 min; they were then observed under an inverted fluorescence microscope (Olympus, Japan). More than five random fields per well were captured at 200× magnification. Image-Pro Plus 6.0 software (IPP 6.0) was used to calculate the percentage of EdU-positive cells (identified by Apollo® 643 fluorescence) among all cells (identified by Hoechst 33,342 nucleus staining).15 (link)
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5

EdU DNA Cell Proliferation Assay

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A Cell-Light 5-ethynyl-2-deoxyuridine (EdU) DNA Cell Proliferation Kit (RiboBio, Guangzhou, China) was utilized to determine cell viability. Briefly, treated LoVo cells were seeded in 24-well plates at a density of 1×105 cells per well, and then exposed to 30 µM EdU at 37 °C for 2 hrs. Next, the cells were fixed with 4% formaldehyde (cat. no. 153814; Biosharp, Wuhan, China) at room temperature for 30 mins, and then permeabilized by exposure to 0.5% Triton X-100 for 10 mins; after which, they were washed and stained with DAPI. After staining, cell fluorescence was measured by flow cytometry.
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6

Cell Proliferation Assays in Colorectal Cancer

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The proliferative ability of cells was measured using the CCK-8 assay (Nanjing KeyGen Biotech Co., Ltd.), according to the manufacturer's instructions. Briefly, HT29 and SW480 cells were plated into a 96-well plate at a density of 1.0×103 cells/well and incubated at 37°C for 24, 48 and 72 h. Then, the absorbance was measured at 450 nm on a microplate reader (Infinite M200 PRO; Tecan Group, Ltd.).
A 5-Ethynyl-2′-deoxyuridine (EdU) incorporation assay. The EdU incorporation assay was conducted using an EdU DNA Cell Proliferation kit (Guangzhou RiboBio Co., Ltd.). After incubation with EdU (1X) 37°C for 2 h, HT29 and SW480 cells were fixed with paraformaldehyde (4%) at room temperature for 30 min followed by staining with Apollo Dye Solution at room temperature for 30 min. Then, the cells were mounted with Hoechst (1X) at room temperature for 30 min. Finally, cells were imaged and counted using an Olympus FSX100 fluorescence microscope (Olympus Corporation) at ×200 magnification.
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7

EdU Assay for Cell Proliferation

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EdU assays were used to monitor cell proliferation. Briefly, LUAD cells were cultured in 96‐well plates in complete media until 80%‐90% confluent, and then treated with 50 μM EdU for 6 h to measure cell proliferation using an EdU DNA Cell Proliferation Kit (RiboBio, Guangzhou, Guangdong, China) according to the manufacturer's instructions.
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8

EdU-Based Cell Proliferation Assay

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The cell-light EdU DNA Cell Proliferation Kit (obtained from RiboBio, Shanghai, China) was used to inspect the 5-ethynyl-20-deoxyuridine (EdU). H520 or H2170 (1 × 104) cells were each planted in 96-well dishes for insertion with si-circPVT1, vector-circPVT1, mock or negative control (NC) oligonucleotide via transfection. After incubation for 48 h at 5% CO2 and 37 °C, 50 mM EdU was added to the cells followed by another 2 h of incubation. The cells were fixed using paraformaldehyde (4%), stained using the Apollo Dye Solution for cell proliferation, whereas DAPI staining was performed for nucleic acids. The rate of cell proliferation was computed as outlined in manufacturer provided instructions. The images were visualized under a fluorescence microscope (Olympus FSX100).
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9

ISL Promotes Cell Proliferation

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The cells were seeded in six-well plates overnight and incubated with ISL for 24 h, and then EdU DNA Cell Proliferation kit (C10310; Guangzhou RiboBio Co., Ltd, China) was applied. All fluorescent images were examined using a Model DMi8 (Leica Microsystems GmbH, Leica, Solms, Germany). The assays were conducted in triplicate and repeated at least three times.
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10

Cell Proliferation Assay with LiCl

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Cell proliferation was determined by using Cell-Light 5-ethynyl-2-deoxyuridine (EdU) DNA Cell Proliferation Kit (RIBOBio. Co., Ltd) [11 (link)]. Briefly, cells (1 × 105) were cultured in 24-well plates. After stimulation with different concentrations (0 mM, 10 mM, 20 mM, 40 mM, and 60 mM) of LiCl for 24 h, cells were exposed to 50 μM EdU for 2 h at 37°C. The cells were then fixed in 4% formaldehyde for 30 min at room temperature and permeabilized in 0.5% Triton X-100 for 10 min. Cells were washed with PBS, and each well was incubated with 200 μM 1 × Apollo reaction cocktail for 30 min, followed by 1 × Hoechst 33342 (200 mL per well) for staining nuclei. The stained cells were imaged under a fluorescent microscope (IX71, Olympus).
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