The largest database of trusted experimental protocols

11 protocols using phospho histone h3 phh3

1

Immunostaining Embryonic Histone H3

Check if the same lab product or an alternative is used in the 5 most similar protocols
Eighteen somite stage embryos were fixed in 4% paraformalde-hyde overnight at 4°C, rehydrated in PBST (phosphate buffered saline + 1% Triton), incubated in immuno block (PBST + 10% normal goat serum) for 1 hr at room temperature, primaryþ antibody in immuno block overnight at 4°C, secondary antibody for 2 hr at room temperature and stored in PBST until imaged. Antibodies used: phospho-Histone H3, pHH3 (1:1,000, Cell Signaling, Cat# 3377, Danvers, MA), anti-rabbit Alexa Flour 555 (1:1,000, Cell Signaling, Cat# 4413S).
+ Open protocol
+ Expand
2

Hematoxylin-Eosin Staining and Immunohistochemistry

Check if the same lab product or an alternative is used in the 5 most similar protocols
Hematoxylin and Eosin (H&E) staining: cells were incubated overnight on glass slides coated with Poly-L-lysine (Sigma) and fixed by 4% PFA in 0.1M MOPS in 0.5M NaCl, pH 7.5 for 10 min and washed with PBS. The slides were stained with Harris Hematoxylin for 5 minutes and 2% Eosin Y for 1 minute (Extended Data Fig 1e).
Immunohistochemistry was based on Braden et al. 201445 . The labeling was done using rabbit anti Phospho-Histone H3 (pHH3; Cell Signaling, 9701) at a concentration of 1:500 (Extended Data Fig. 5d).
+ Open protocol
+ Expand
3

Quantifying Tumor Cell Proliferation and Apoptosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Excised tumors were fixed in formalin for 24 h and embedded in paraffin. Subsequent processing was performed double-blind: the tissue blocks were randomly numbered for sectioning and immunohistochemistry and analysis was performed by observers blinded to treatment. The tumor containing paraffin-blocks were randomly numbered (11 treated, 11 untreated mice) and sectioned at 2.5 μm by a blinded histologist. Sections were stained with H&E and antibodies against Ki-67 (rabbit monoclonal antibody, Thermo Fisher Scientific, Boston, MA, USA; clone SP6; pretreatment Tris95 C 30′ dilution: 1:200), phosphohistone H3 (PHH3; rabbit monoclonal antibody, Cell Signaling, Beverly, MA, USA; clone 5A1E; pretreatment Tris95 C 30′ dilution: 1:100) and cleaved Caspase 3 (rabbit monoclonal antibody, Cell Signaling, clone 5A1E; pretreatment: Tris95 C 30′ dilution: 1:100). Immunohistochemistry was performed on an automated platform (Leica Bond RX, Leica Biosystems, Muttenz, Switzerland).
+ Open protocol
+ Expand
4

Cisplatin and MK-1775 Effects on Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were treated with cisplatin (1.5 μmol/L), MK-1775 (0.25 μmol/L) either alone or in combination as previously indicated. Cell extracts were prepared and Western blot analysis was conducted as described previously (28 (link)). Membranes were blocked for 1 hour at room temperature using 1% powdered milk in 0.1% Tween-20 in TBS, and incubated overnight with the following primary antibodies, including phospho-γH2AX (Ser139; #2577), phospho-CDC2-Tyr15 (#9111), CDC2 (#9112), cyclin B1 (#4138), phospho-CDC25C-Ser216 (#4901), phospho-Histone H3 (p-HH3, #9701), PARP-1, CHK1 (#2345), and CHK1-Ser345 (#2341), all from Cell Signaling Technology; β-actin (#A5316; Sigma-Aldrich). Membranes were then washed with 0.1% Tween-20 in TBS and incubated for 1 hour at room temperature with species-specific horseradish peroxidase–conjugated secondary antibodies, and protein signals were developed using the SuperSignal West chemiluminescent system (Pierce Biotechnology). Membranes were stripped and reprobed with anti–β-actin to verify equal protein loading.
+ Open protocol
+ Expand
5

Western Blot Antibodies and Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The antibodies used in west blot were listed as follows: CDK6 (#db807, Diagbio, China); PARP (#9542), Cyclin D1 (#55506), Cyclin B1 (#12231), Cleaved-PARP (#5625), CDK2 (#18048), mTOR (#2983), p-mTOR (#5536), p-4E-BP1 (#2855), 4E-BP1 (#9644), Caspase-3 (#9668), phospho-Histone H3 (pHH3) (#53348), Histone H2A (γH2A.x) (#12349), Cleaved Caspase-3 (#9664), GAPDH (#5174) were purchased from Cell Signaling Technology (USA); SQSTM1/p62 (#A19700) and LC3I/LC3II (#A5618) were obtained from ABclonal Technology (Wuhan, China); goat anti-mouse and goat anti-rabbit IgG peroxidase conjugated secondary antibodies (#31460 and #31430, Thermo-Pierce, USA). The protein samples were added to 4–20% SurePAGE gels (15 wells) (GenScript, China) and transferred to PVDF membranes after protein separation. Incubate the membrane with the primary antibodies mentioned above. After washing with TBST (0.1% (v/v) Tween 20 in TBS), the membranes were incubated with secondary antibodies and then stained with enhanced chemiluminescence.
+ Open protocol
+ Expand
6

Hematoxylin-Eosin Staining and Immunohistochemistry

Check if the same lab product or an alternative is used in the 5 most similar protocols
Hematoxylin and Eosin (H&E) staining: cells were incubated overnight on glass slides coated with Poly-L-lysine (Sigma) and fixed by 4% PFA in 0.1M MOPS in 0.5M NaCl, pH 7.5 for 10 min and washed with PBS. The slides were stained with Harris Hematoxylin for 5 minutes and 2% Eosin Y for 1 minute (Extended Data Fig 1e).
Immunohistochemistry was based on Braden et al. 201445 . The labeling was done using rabbit anti Phospho-Histone H3 (pHH3; Cell Signaling, 9701) at a concentration of 1:500 (Extended Data Fig. 5d).
+ Open protocol
+ Expand
7

Immunofluorescence Analysis of Chicken Embryos

Check if the same lab product or an alternative is used in the 5 most similar protocols
The chicken embryos were harvested after incubation and fixed in 4% PFA overnight at 4 °C. The embryos were blocked with 10% Normal Goat Serum (SB Cat.
No. 0060-01) and incubated with the following primary antibodies at 4 °C overnight on a shaker: HNK-1 (1:500, Sigma, USA), PAX7 (1:100, DSHB, USA), AP2α (1:100, Cell Signaling Technology, USA), Phospho-Histone H3 (pHH3, 1:200, Cell Signaling Technology, USA), neurofilament (NF, 1:200, Invitrogen Antibodies, USA) and cleaved-Caspase3 (c-Caspase3, 1:200, Cell Signaling Technology, USA). After extensive rinsing in PBST (0.1% Tween-20), the embryos were incubated with the corresponding Alexa Fluor 555 or 488 secondary antibody (1:1000, Invitrogen, USA) at 4 °C overnight on a shaker. The embryos were later counterstained with DAPI (1:1000, Invitrogen, USA) at room temperature for 2 hours.
+ Open protocol
+ Expand
8

DNA Damage Response Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies to p-Chk1 (#2341), 53BP1 (#4937), β-actin (#4967L), and phospho-Histone H3 (p-HH3, #9706) were purchased from Cell Signaling Technology. Antibodies to cdc25a (sc-7389) and rad51 (sc-53428) were purchased from Santa Cruz Biotechnology, and γ-H2AX (Ser139) clone JBW301 (05–636) antibody was purchased from Millipore.
+ Open protocol
+ Expand
9

Quantifying Cellular Proliferation and Apoptosis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibody markers were analysed on seven micron, paraffin-embedded sections via standard immunofluorescence techniques using the following antibodies: Phospho-Histone H3 (pHH3) (Cell Signalling #9701, 1:100), marker of proliferation (Ki67) (BD Pharmingen #556003, 2.5 μg/ml) and cleaved caspase-3 (CC3) (abcam #ab2302, 10 μg/ml). High-temperature unmasking was performed with preheated pH 6.0 citrate buffer (Vector Labs) for 5 min, and mouse-on-mouse blocking reagent was used to block non-specific binding of mouse primary antibodies (Vector Labs). For the quantitation of positively staining pHH3, CC3 and/or Ki67 cells: tumour cell nuclei as identified by DAPI were scored for the presence or absence of pHH3, CC3 and Ki67 staining in five fields of view per tumour in triplicate for each treatment group [26 ]. GraphPad Prism 7.0a software was used to analyse immunofluorescence difference between treatment groups using a Welch’s t test for pHH3 and a Holm-Sidak corrected multiple t test for the CC3 and Ki67 co-stain.
+ Open protocol
+ Expand
10

Immunohistochemical and FISH Analysis of PDX Tumors

Check if the same lab product or an alternative is used in the 5 most similar protocols
EnaV and isotype control ADC (IgG1-b12-vcMMAE) were provided by Genmab BV (Utrecht, The Netherlands) as a stock solution (10 and 9.80 mg/mL, respectively) and diluted to a working solution of 0.8 mg/mL in phosphate buffered saline (PBS) immediately before injection. The following antibodies were used for manual immunohistochemistry (IHC) of experimental PDX tumors: alpha-smooth muscle actin (alpha-SMA; Agilent Technologies, Santa Clara, CA, USA, cat. no #M085129-2), AXL (Cell Signaling Technology, cat. no #8661), cleaved poly (ADP-ribose) polymerase (cleaved PARP; Abcam, Cambridge, UK, cat. no #32064), murine double minute 2 homolog (MDM2; ThermoFisher Scientific, Waltham, MA, USA, cat. no #337100) and phospho-histone H3 (pHH3; Cell Signaling Technology, cat. no #9701). All sections were incubated using Envision-HRP-anti-rabbit/mouse (Agilent Technologies, cat. no #K4003/#K4001), except for cleaved PARP for which SignalStain Boost IHC Detection Reagent (Cell Signaling Technology, cat. no #8125S) was used. Subsequently, stainings were developed using DAB (Agilent Technologies, cat. no #K346811), followed by hematoxylin counterstaining (VWR, Radnor, PA, USA). The following probes were used for MDM2 FISH: MDM2 (12q15)/SE12 (Leica Biosystems, Deer Park, IL, USA). Tissue pretreatment, hybridization, and detection were carried out according to the manufacturer’s instructions.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!