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2 protocols using nuclease p1 penicillium citrinum

1

Enzymatic Deprotection and Purification of Oligonucleotides

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MC was generously gifted by Professor Maria Tomasz. DMC was synthesized from MC by a published procedure.[47 (link)] Phosphodiesterase I (snake venom diesterase (SVD), Crotalus adamanteus venom, E.C. 3.1.4.1.) and alkaline phosphatase (Escherichia coli, EC 3.1.3.1) were obtained from Worthington Biochemical Corp (Freehold, NJ). Nuclease P1 (penicillium citrinum, EC 3.1.30.1) was from Sigma Life Sciences (St. Louis, MO). Sep-Pak C-18 cartridges were purchased from Waters Corp (Milford, MA). Oligonucleotides were purchased from Midland Certified Reagent (Midland, TX).
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2

Analytical Protocols for Oxidative Stress

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Reduced glutathione (GSH), oxidized glutathione GSSG, O-(pyridin-3-ylmethyl)hydroxylamine (PMOA), butyraldehyde, 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), calf thymus (CT) DNA, p-Benzoquinone (p-BQ), HQ, 2-methylhydroquinone (2-MeHQ), Cat, p-cresol (p-Cre), m-cresol (m-Cre), and o-cresol (o-Cre), Acr, methylacrolein (MeAcr), crotonaldehyde (Crot), Methyl vinyl ketone (MVK), RNase A (bovine pancreas), RNase T1 (Aspergillus oryzae), proteinase K (Tritirachium album), sodium dodecyl sulfate (SDS), DNase I (type IV, bovine pancreas), alkaline phosphatase (Escherichia coli), and nuclease P1 (Penicillium citrinum) were purchased from Sigma Aldrich (St. Louis, MO, USA). Phosphodiesterase I (Crotalus adamanteus venom) and adenosine deaminase were purchased from Worthington Biochemical Corp. (Newark, NJ). LC/MS grade solvents were purchased from Fisher Chemical Co. (Pittsburgh, PA). Puregene protein precipitation solution was purchased from Qiagen (Germantown, MD). Strata-X 33 μm Polymeric Reversed Phase 30 mg solid-phase extraction (SPE) cartridge was obtained from Phenomenex (Torrance, CA, USA). If not stated otherwise, all other chemicals were purchased from Sigma-Aldrich (St. Louis, MO).
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