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20 protocols using 100 μm strainer

1

Murine Bone Marrow-Derived Dendritic Cell Culture

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Bone marrow was harvested from the femur and tibias of mice [17 (link)]. Harvested cells were resuspended and incubated in ammonium chloride buffer (155 mM NH4Cl, 0.1 mM Na-EDTA, 10 mM KHCO3) for 1 min to lyse red blood cells. Cells were centrifuged (1200xg, 5 min) and resuspended in RPMI media and passed through a 100 μm strainer (BD Biosciences; San Jose, CA, USA). The resultant cells were cultured at 1x106 cells/mL in complete medium (RPMI media +10% FCS, 4 mM L-glutamine, 100 U/mL streptomycin/penicillin, 20 mM HEPES pH7.4) supplemented with 20 ng/mL mouse rGM-CSF and 20ng/mL mouse rIL-4. Cultures were maintained at 37°C under humidified 5% CO2 conditions for 6 days before experimentation.
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2

Murine Nasal and Blood Sampling

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Blood and nasal wash were obtained from mice. Briefly, the animals were anesthetized with ether and blood was taken from the abdominal aorta with heparinized syringes. The jaw was incised bilaterally and the nasal cavity, in vicinity to root of the tongue, was exposed. The nasal cavity was washed with saline and the wash was recovered. The blood and the nasal wash were centrifuged at 5,000 rpm for 8 min and stored at −80°C until examination. Then, after thorough washing of the nasal cavity with saline, the upper palates were removed and the NALTs were isolated under the microscope. NALT cells were suspended with 100 μm strainer (BD, Franklin Lakes, NJ) and recovered by centrifugation. The nasal passage cells were prepared as reported [28 (link)]. Briefly, the nasal passage cells were obtained by chipping off from the wall of the nasal cavity, minced, and dispersed with collagenase D (Roche, Basel, Switzerland). The cells were suspended with strainers and separated by biphasic centrifugation with 40% and 75% Percoll (GE Healthcare) at 1,000 rpm for 25 min. The cells in the boundary phase were collected and washed with RPMI 1640 medium.
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3

Isolation of Villous Cytotrophoblast Cells

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Villous cytotrophoblast cells (CTBs) were isolated from term placental tissue by enzymatic digestion and Percoll gradient separation, as previously described, with minor modifications (Kallol et al., 2018 (link)). In brief, approximately 50 g of villous tissue was washed in 0.9% NaCl (Sigma–Aldrich) four times for 5 min. Thereafter, the tissue was minced and digested three times with 0.25% trypsin (Sigma–Aldrich) and 300 IU/mL deoxyribonuclease I (Sigma–Aldrich) at 37°C (20 min each). The cell suspension was filtered and overlaid on FBS (Seraglob, Switzerland). After centrifugation at 1,000 × g for 15 min at 10°C, the cell pellet was collected in Dulbecco modified eagle medium (high glucose) basic medium (without FBS) and filtered through 100-μm strainer (BD Biosciences, San Jose, CA, United States). Next, cells were overlaid on a discontinuous Percoll® (Sigma–Aldrich) density gradient. After centrifugation, CTBs were located at the layer corresponding to 1.046–1.065 g/mL (35–50%) density (Petroff et al., 2006 ). The isolated CTBs were cultured at a density of 1 × 106 cells/cm2 in 6-well CellBIND® plates (Corning, New York, NY, United States) in Dulbecco modified eagle medium (high glucose) supplemented with 10% FBS and 1% antibiotic–antimitotic (Thermo Fisher Scientific). Cells were cultured for 12 h (CTB stage) or 72 h (STB stage).
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4

Isolation and Sorting of FAPs from Injured Skeletal Muscle

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The FAPs were sorted as previously described (Dong et al., 2014 (link)). Briefly, the skeletal muscles of 6- to 8-week-old mice were collected on day 3 of injury and digested with collagenase type II (2.5 U/mL, Sigma-Aldrich) in 10 mM CaCl2 plus 1% penicillin/streptomycin at 37°C for 30 min. Then collagenase D (1.5 U/mL, Roche) and dispase II (2.4 U/mL, Roche) were added and incubated at 37°C for 1 h. The muscle slurry was passed through a 100-μm strainer (BD Biosciences, San Jose, CA, USA) and a 40-μm strainer (BD Biosciences, San Jose, CA, USA) and then the cells were incubated with primary antibodies for 30 min at 4°C to sort FAPs (Integrin α7-, CD31-, CD45-, Sca1+ cell population).
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5

Isolation and Differentiation of Murine Adipose SVF Cells

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SVF cells from 6- to 7-week old male C57BL/6J mice were isolated as described previously5 (link). In brief, adipose tissue was minced on ice and digested with 10 mg/ml collagenase D (Roche) and 2.4 mg/ml dispase II (Roche) in phosphate-buffered saline (PBS) supplemented with 1% penicillin/streptomycin for 45 min at 37 °C, followed by quenching with complete medium and filtering through a 100 μm strainer (BD Biosciences). The cell suspensions were centrifuged, suspended and filtered through a 40 μm strainer (BD Biosciences) and then further centrifuged and suspended before plating onto 10 cm dishes. SVF cells were cultured in DMEM/F12 supplemented with 10% FBS and 1% penicillin/streptomycin (Invitrogen). Adipocyte differentiation was carried out by treating confluent cells in growth medium supplemented with 0.5 mM IBMX, 125 nM indomethacin, 1 μM dexamethasone, 850 nM insulin, and 1 nM T3 for 48 h. Following this, the cells were maintained in growth medium supplemented with insulin and T3 for 8 days. To analyze the effects of BBR on differentiation, BBR, or rosiglitazone (a positive control) was added throughout the differentiation. Experiments were performed on day 8 of differentiation.
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6

Isolating Cells from Surgical Specimens

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Specimens were collected at surgery and immediately transferred to the laboratory where they were digested with collagenase (Sigma, St. Louis, MO) at 1 mg/ml in RPMI1640 in a shaking incubator for 2 h at 37 °C. The digest was then strained through sterile gauze to remove particulates, and the cell fraction was collected by centrifugation. The cell pellets were washed multiple times with Hank's Balanced Salt Solution (HBSS), re-suspended in HBSS, and red blood cells were removed by density centrifugation with Lympholyte H (Cedarlane, Burlington, ON), according to the manufacturer's protocol. The cell suspension was then passed through a 100 μm strainer (BD Biosciences, Mississauga, ON), and cells were counted.
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7

Neonatal Rat Ventricular Myocyte Isolation

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Neonatal rat ventricular myocytes (NRVMs) were isolated from 1- to 2-d-old Sprague–Dawley pups as we described previously.7 (link) Hearts were immediately removed under adequate anesthesia, and ventricles were carefully minced. After rinsing with PBS, ventricles were digested with 1 mg/ml collagenase I (Gibco, 17100017). After filtration through a 100-μm strainer (Falcon) and centrifugation at 800 g for 5 min, the cells were resuspended in DMEM/HG (HyClone) containing 10% FBS (CellMax), 10 mM HEPES, 0.1 mM BrdU (Sigma-Aldrich), and 1% penicillin/streptomycin (HyClone) and plated for 90 min to allow the attachment of fast-adhering fibroblasts. Nonadherent NRVMs were resuspended and seeded in plates with culture medium lacking BrdU.
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8

Primary Hepatocyte Isolation and Culture

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We utilized a method to isolate and culture primary hepatocytes as described previously [13 (link)]. Briefly, the procedure was conducted by two-step collagenase perfusion with collagenase type IV (Worthington, LS004188) and collagenase P from clostridium histolyticum (Roche, 11213857001), and the perfusate was retrograde and nonrecirculating. As the liver was gradually digested, we dissected it and then gently teased it into small pieces that were passed through a 100 μm strainer (Falcon). After 3 min centrifugation at 800 rpm, cells were cultured in RPMI1640 medium (Gibco, C11875) with 10% fetal bovine serum (Thermo Fisher, 10099141C) and 1% penicillin/streptomycin (Gibco, 15140122) for 6-8 h for attachment on the plates in a 37°C incubator with 5% CO2. Notably, collagen I (BioCoat, 354236) was diluted with 30% absolute ethyl alcohol to 1.2% solution and then precoated on the plates followed by 30 min of ultraviolet radiation and 8 h of ventilation. The plates were washed three times with DPBS before use.
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9

Isolation of Primary Murine Hepatocytes

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Male C57/B6J and Nrf2−/− mice (8 weeks old) were used for isolating primary hepatocytes. Hepatocytes were isolated by a two-step collagenase perfusion technique. Briefly, the inferior vena cava was cannulated with angiocatheter and the portal vein was cut. The liver was perfused via the inferior vena cava with 100 mL of PBS at 37°C, followed by perfusion with 100 mL of collagenase type IV (Wellington) in HBSS containing Ca2+ and Mg2+ (GIBCO). After the liver was digested, it was dissected and cut into small pieces and passed through a 100 μm strainer (Falcon). Hepatocytes were separated from non-parenchymal cells by low-speed centrifugation and further purified by Percoll gradient centrifugation (50% v/v, Sigma). Cells were plated at a density of 0.3 × 106 on a 6-well collagen-coated plate. Hepatocytes were allowed to recover overnight and experiments were started 24 h post isolation.
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10

Immune Cell Isolation and Analysis

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The lymph nodes were removed into Petri dishes containing 5 ml PBS, rubbed, and broken to make cell suspensions. The suspension was centrifuged at 1500 rpm for 5 min. The supernatant was discarded, and 2 ml ammonium‐chloride‐potassium (ACK) lysis buffer was added and incubated at room temperature for 1 min. Then, 2 ml PBS was added to neutralize the ACK lysing buffer. The suspension was centrifuged at 1500 rpm for 5 min. The supernatant was discarded, and then 2 ml PBS was added to resuspend the cells. The suspension was then filtered through a 100 μm strainer (Falcon, Corning) to obtain a single cell suspension. The cells were stained with fluorochrome‐labeled anti‐rat monoclonal antibodies against CD3, CD4, CD11b or CD45R (BD Bioscience) to identify T cells, macrophages and B cells. The cells were analyzed by two‐color flow cytometry using a BD FITC Canto II (BD Bioscience) and FlowJo software (FlowJo). The cells were gated to exclude residual tissue debris and nonviable cells, and sample data were collected of 20,000 cells. For evaluation of immune cell trafficking, similar procedures were performed to identify the CD11b and FITC double‐positive cells.
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