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89 protocols using sb203580

1

Transwell Assay for Cell Migration

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We used transwell chambers (Corning, NY, USA) with a pore size of 8 μm to detect cell migration. In total, 24 h before the experiment, the medium was changed to a serum-free medium, and the cells were starved and placed in a 37°C, 5% CO2 incubator. The cells were trypsinized and centrifuged. SB203580 (MedChemExpress), Y27632 (MedChemExpress), and LY294002 (MedChemExpress) were diluted in DMEM containing 0.3% BSA at a concentration of 25 nM/ml for SB203580, 10 nM/ml for Y27632, and 10 nM/ml for LY294002. The concentration of the cell suspension was adjusted to 8.0 × 105 cells/ml added to the upper chamber of the Transwell. The intervention group was pretreated by adding the above signal pathway inhibitors in the upper chamber for 30 min, the control group was added with a basal medium in the lower chamber, and the experimental and intervention groups were added with VEGF (40 ng·ml−1) in the lower chamber. After 24 h of incubation at 37°C, the cells that had migrated to the lower surface were fixed with 4% paraformaldehyde for 15 min and stained with 1% crystal violet for 30 min. Then, the migrating cells were photographed with an inverted microscope (×200 magnification) and counted using ImageJ software.
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2

Eosinophil Purification and Activation Assay

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Peripheral blood eosinophils from healthy controls were purified by using an eosinophil isolation kit (Miltenyi Biotec, San Diego, CA, USA, 130-092-010). Eosinophil purity was assayed using flow cytometry and Wright–Giemsa staining (Supplementary Figure 2A). This procedure consistently resulted in a highly purified eosinophil population (95%–99%). These eosinophils (>99% viable by trypan blue exclusion) were cultured in RPMI 1640 medium supplemented with 10% fetal bovine serum (FBS), penicillin (100 U/ml), streptomycin (0.1 mg/ml), and granulocyte-macrophage colony-stimulating factor (GM-CSF, 50 ng/ml; Novoprotein, Suzhou, China, C003) at 37°C in a humidified atmosphere of 5% CO2. Then, eosinophils (2 × 105 per well in 200 µl of RPMI) were stimulated in a 96-well plate for 24 or 48 h with or without the addition of the following agents: recombinant TNF-α (50 ng/ml; Novoprotein, Suzhou, China, C008), recombinant IL-5 (50 ng/ml; Novoprotein, Suzhou, China, CI59), 3 μM specific p38 mitogen-activated protein kinase (MAPK) inhibitor SB203580 (MedChemExpress, NJ, USA, HY-10256A), and 3 μM SB202474 (a negative analog of SB203580) (MedChemExpress, NJ, USA, HY-112367). At the end of this incubation, eosinophils were harvested and investigated further by using flow cytometry for the expression of CD40 and ICOSL.
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3

Vasodilatory Effects of Neflamapimod

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Neflamapimod (Nefla) was purchased from MedChemExpress (Monmouth Junction, NJ, USA) and used in the concentration range of 0.001–10 µM. SB203580 was purchased from MedChemExpress and used at a final concentration of 10 µM. Phenylephrine (PE), and 4-aminopyridine (4-AP) purchased from Sigma-Aldrich (St. Louis, MO, USA) were used at a final concentration of 1 µM and 1 mM, respectively. Glibenclamide (10 µM), paxilline (10 µM), nitro-l-arginine (L-NNA, 10 µM), sodium nitroprusside (SNP, 10 µM), indomethacin (indo, 10 µM) and acetylcholine (ACh, 1 µM)) were purchased from Tocris (Minneapolis, MN, USA). 4-AP, SNP, indo and PE were dissolved in distilled water. Nefla, gliben, paxilline, SB203580, L-NNA, and ACh were dissolved in dimethyl sulfoxide (DMSO). The maximum concentration of DMSO in the myograph chamber was < 0.1%, which had no effect on arterial contractility.
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4

Kinase Inhibitor Effects on Inflammatory Signaling

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SB203580 (p38 MAPK inhibitor, 22,898), SP600125 (JNK1 inhibitor, 13,701), and U0126 (ERK1/2 inhibitor, 19,826) were bought from MedChem Express (NJ, USA). P38 MAPK Rabbit monoclonal antibody(1:1000, 8690), Phospho-p38 MAPK (p-p38 MAPK) Rabbit monoclonal antibody(1:1000, 4511), ERK1/2 MAPK Rabbit monoclonal antibody(1:1000, 4695), Phospho-ERK1/2 (p-ERK1/2) MAPK Rabbit monoclonal antibody(1:2000, 4370), JNK1 Rabbit monoclonal antibody(1:1000, 9252), and Phospho-JNK1 (p-JNK1) Rabbit monoclonal antibody(1:1000, 4668) were bought from Cell Signaling Technology. Rabbit IL-6 Polyclonal Antibody was bought from Bioss (1:500, bs-0782R, Beijing, China), Rabbit TNF-α antibody was bought from Abcam (1:1000, ab205587, USA). Peroxidase-conjugated goat anti-rabbit IgG(H + L) was purchased from Bioss (1:5000, bs-40295G, Beijing, China). Sixty male Sprague-Dawley (SD) rats (3–4 weeks, 80-100 g) were bought from Shanghai SLAC Laboratory Animal Co. Ltd. (License No. SCXK (HU)2017–0005). All rats were raised in a barrier environment of light/darkness (12/12 h alternations) at 22 °C ~ 24 °C, and were provided with adequate food and water. All experimental protocols are consistent with Institute of Laboratory Animal Resources, National Academy Press, Washington, DC1996.
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5

Regulation of Luciferase Activity by EGF, P38, and miR-675

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Cells cultured on 96‐well plates were transiently co‐transfected with firefly luciferase reporter plasmids (0.2 μg) and ranilla luciferase co‐reporter plasmids (pRL‐TK, 0.02 μg). Then, these cells were simultaneously or subsequently treated with EGF (20 ng/mL), P38 MAPK inhibitor SB203580 (10 μmol/L), or miR‐675‐5p mimics (20 μmol/L, add 0.4 μL into 100 μL medium per well) for the indicated time periods. Next, the cellular luciferase activity was measured using Dual‐luciferase® Reporter Assay System kit (#E1910, Promega) according to the manufacturer's instructions. Results were calculated as the ratios between the activity of firefly luciferase and ranilla luciferase. The recombinant human EGF (#AF‐100‐15) was purchased from PeproTech (Rocky Hill, NJ, USA), and P38 MAPK inhibitor SB203580 (#HY‐10256) was purchased from MedChem Express (Monmouth Junction, NJ, USA).
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6

Screening of Chemical Inhibitors for GFP-AZI2 Puncta

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GFP-AZI2 -4OHT cells were seeded in 24-well plates and left overnight before treatment with respective inhibitors. Upon treatment, images of cells were acquired every 2 h with an Incucyte live-cell imaging system (Essen Bioscience) to monitor GFP-AZI2 puncta formation. Inhibitor concentrations used in this screen were; SB203580, 10 µM (MedChemExpress, HY-10256); Tozasertib, 5 µM (MedChemExpress, HY-10161); Chloroquine, 100 µM (Sigma Aldrich, C6628); GDC0994, 5 µM (Cayman Chemical, 21107); Prexasertib, 5 µM (MedChemExpress, HY-18174); LTURM34, 10 µM (MedChemExpress, HY-101667); GSK650394, 5 uM (MedChemExpress, HY-15192); Amlexanox, 100 µM (MedChemExpress, HY-B0713); U0126, 10 µM (Cayman Chemical, 70970); IRAK 1–4 Inhibitor I, 10 µM (MedChemExpress, HY-13329); SP600125, 25 µM (MedChemExpress, HY-12041); SBI0206965, 10 µM (Cayman Chemical, 18477); BMS345541, 10 µM (MedChemExpress, HY-10519); Triciribine, 10 µM (MedChemExpress, HY-15457); Silmitasertib, 10 µM (MedChemExpress, HY-50855); PP242, 5 µM (MedChemExpress, HY-10474); Lys05, 20 µM (provided by Dr. Ravi Amaravadi); Palbociclib, 5 µM (MedChemExpress, HY-50767); and D4476, 50 µM (MedChemExpress, HY-10324). The puncta/image at 24 h were quantified and plotted.
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7

Modulating EZH2 and GADD45A in Trophoblast Cells

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Exponentially growing HTR-8/SVneo and JEG3 cells (5 × 106) were seeded in 24-well plates. After 6 h when the cell confluence reached 70%-80%, the cells were transfected with overexpression plasmid-negative control (oe-NC); oe-EZH2, short hairpin (sh) RNA-NC (sh-NC), sh-EZH2 or sh-GADD45A (Vectorbuilder, Guangzhou, Guangdong, China). All transfections were conducted adhering to the instructions of the Lipofectamine 2000 kit (Thermo Scientific Pierce, Rockford, IL, USA). Transfected cells were incubated in RPMI-1640 at constant 37°C with 5% CO2 until further use.
HTR-8/SVneo cells stably transfected with sh-EZH2 were seeded in six-well plates (1 × 103 cells per well). Later, each well was filled with 2 mL RPMI-1640, and cells were treated with 20 µM SB203580 (HY-10256, MedChemExpress, Monmouth Junction, NJ, USA) for 1 h. Cells treated with equal volume of dimethyl sulfoxide (DMSO) for 1 h were set to control. After that, the medium was refreshed and the cells were collected 48 h later.
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8

Preparation of CMC and DHA solutions

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The 0.5% carboxymethyl cellulose (CMC) solution (Solarbio Company, Beijing, China, Catalog No. 9004-32-4) and a 0.1 mg/mL DHA solution (Puyi Biological Company, Nanjing, China, Catalog No. PY1835126Q, ~98% purity) were prepared as previously described.3 (link) Briefly, 0.1 g of sodium CMC was dissolved in 20 mL of warm distilled water. When the solution was restored to room temperature, 0.2 g DHA was added and the solution was stirred for 1 h in dark. CMC without DHA was used as the solvent control. The SB 203580 and T-5224 are purchased from MedChemExpress company.
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9

Inflammatory Stimulation of PDLSCs

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As in our previous study, the PDLSCs used in the current study were isolated from impacted third molar human teeth that were obtained after informed patient agreement and following the rules approved by the Beijing Stomatological Hospital, Capital Medical University (Ethics Committee Agreement, Beijing Stomatological Hospital Ethics Review No. 2011‐02). These cells were cultivated and verified according to our previous protocol.8In this study, 10 ng/mL tumour necrosis factor‐alpha (TNF‐α) (R&D Systems) and 100 ng/mL interferon‐gamma (INF‐γ) (R&D Systems) were used to stimulate the PDLSCs. Selective CB1 agonist, 10 µM R‐1 methanandamide (R‐1 Meth) and selective CB1 antagonist, 10 µM AM251 (Cayman Chemical) were used. The p38 MAPK‐specific inhibitor, 20 µM SB203580 (MedChemExpress), and the JNK‐specific inhibitor, 20 µM SP600125 (Merck), were used to stimulate the PDLSCs.
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10

Molecular Signaling Pathway Modulation

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P38 MAPK inhibitor SB203580, ERK inhibitor U1026, JNK inhibitor SP600125, Baf-A1 and Rapamycin were obtained from MedChemExpress (Shanghai, China). The above reagents were dissolved in dimethyl sulfoxide (DMSO) in the experiments. Rabbit anti-p-p53 (80195-1-RR), anti-p53 (10442-1-AP) antibody was obtained from Proteintech (Wuhan, China). The other antibodies used in the experiments were purchased from Cell Signaling Technology (Maryland, USA). The HPR-conjugated goat anti-mouse IgG and HRP-conjugated goat anti-rabbit IgG antibodies were purchased from ZSGB-BIO (China). siRNAs for negative control and JNK were purchased from Ribobio (Guangzhou, China).
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