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Toluidine blue

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Toluidine blue is a basic dye commonly used in histology and microscopy applications. It acts as a stain, highlighting cellular structures and components in tissue samples. The core function of toluidine blue is to provide contrast and visualization for microscopic examination and analysis.

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11 protocols using toluidine blue

1

Cell Morphometry of GA3-Treated Fruit

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Three replicate ovary and three replicate hypanthium tissue samples were dissected from mature (132 DAT) GA3-treated and HP fruit and embedded for sectioning41 (link). Briefly, tissue was fixed in 4% paraformaldehyde (Affymetrix USB, OH) for 1e week, dehydrated through an ethanol series, and embedded in Paraplast Plus paraffin wax (Sigma-Aldrich, MO). Embedded tissue was sectioned at 8 µm with an 820 rotary microtome (American Optical, NY) and mounted on Superfrost plus microscope slides (Thermo Fisher Scientific, MA). Sections were washed with Histo-Clear II (National Diagnostics, GA), rehydrated and stained with 0.05% Toluidine Blue (Electron Microscopy Sciences, PA). Stained slides were viewed at 10x on an Optiphot-2 light microscope (Nikon, JPN); digital images containing ~1.3 × 1 mm spans of the largest observed cells were taken with a PAXcam (MIS Inc, IL). Three images from each replicate were analyzed by counting and measuring cells using ImageJ42 (link). Cell size was averaged for nine images per tissue type for each treatment and compared statistically between treatments using an unpaired-t test.
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2

Enucleated Eye Tissue Preparation

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Eyes were enucleated, put in a plate with cold PBS and an incision was made under the microscope to let the fixative enter into the eye. Eyes were immersed in the fixative solution 2 h at RT while rotating and after taking out the lens, eyes were put on fresh fixative o/n at 4 °C in (2% PFA, 2% GA (Sigma, #G5882) in 0.1 M cacodilate buffer ph7.4 (CB, Sigma, #C4945). Next day we washed abundantly in 0.1 M CB (3 times for 15 minutes). Then, eyes were put under rotation in the solution 1% Osmium tetroxide, OsO4, (Sigma, #75632, 1% Potassium ferrycianide (Sigma, #702587) diluted in distilled water for 2 h at 4 °C in dark. Next, they were washed abundantly with water (until no yellow color in detectable). Then, we dehydrate the samples following 50%, 70%, 80%, 90%, 95%, and twice 100% for 10 min each in shaker. Finally, we underwent the inclusion process by incubating 3 times in propylene oxyde (Sigma, #540048) for 10 min. To infiltrate the tissue with the resin Epon (EMS:Embed 812 #14120), we use propylene oxide:Epon resin 3:1 (1 h), propylene oxide:Epon resin 1:1 (overnight), propylene oxide:Epon resin 1:3 (1 h) and pure Epon resin 2 times for 1 h, all in the shaker at RT. Finally, we included the eyes oriented in Epon in the mold in the oven at 60 °C for 12 h. For visualization, 0.5 µm-semithin sections were stained with toluidine blue (Electron Microscopy Sciences, #22050).
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3

Equine Bronchoalveolar Lavage for Inflammatory Assessment

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At the conclusion of HBP each day horses were nebulized with 0.005 mg/kg albuterol (albuterol sulfate 0.083%, Nephron Pharmaceuticals Corporation, West Columbia, SC) and allowed a 15-min waiting period to reduce any residual bronchoconstrictive effects of histamine prior to BAL. Horses were then sedated (xylazine 0.5 mg/kg IV, butorphanol 0.01 mg/kg IV) for BAL, as previously described, to assess the effect of nebulized lidocaine on the cellular inflammatory response. BALF was kept on ice until it was delivered to the laboratory within 30 min, where it was centrifuged at 500 g for 10 min at 4°C. Slides were then prepared using the sedimentation method and stained with modified Wright-Giemsa (Dip Quik, Jorgensen Laboratories, Loveland, CO) and toluidine blue (Electron Microscopy Sciences, Hatfield, PA) stains, the latter for the enumeration of mast cells. Cells (n = 500 Wright-Giemsa, n = 1,000 toluidine blue) were classified by two investigators (JM, MM) as the percentage of total cells that were macrophages, lymphocytes, neutrophils, eosinophils, and mast cells (400x magnification). Horses were determined to have an abnormal BALF cytology using cutoff values established by our laboratory (> 10% neutrophils, > 2% mast cells, or ≥ 1% eosinophils) (24 (link)).
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4

Assessing Axonal Injury in Optic Nerves

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For axonal injury assessment, animals were euthanized under isoflurane anesthesia and eyes were perfusion-fixed with buffered 4% paraformaldehyde as described above. Eyes were enucleated and retrobulbar optic nerves 1 mm distal to the globe were dissected. Retrobulbar nerves were postfixed in 5% glutaraldehyde for 24 hours, embedded in plastic, transversely sectioned, and stained with toluidine blue (Electron Microscopy Sciences, Hatfield, PA, USA), followed by light microscopy for assessment of morphologic evidence of axonal degeneration.39 (link)
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5

Optic Nerve Axon Injury Assessment

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To determine any potential optic nerve axon injury due to the surgical technique alone, a group of additional rats (n = 10) underwent the above surgical approach unilaterally using pledget soaked in vehicle buffer only. The animals were allowed to recover from surgery and were sacrificed 10 days post pledget placement (equivalent to the time necessary for essentially complete axon degeneration after optic nerve transection25 (link)). The retrobulbar optic nerves (including the contralateral fellow eyes which did not undergo surgical intervention) were perfusion-fixed with 4% paraformaldehyde, followed by 5% glutaraldehyde, embedded in plastic, transversely sectioned and stained with toluidine blue (Electron Microscopy Sciences, Hatfield, PA, USA), followed by light microscopy grading for morphologic axonal degeneration on a scale of 1 (no axonal injury) to 5 (axonal degeneration involving the entire nerve area), as previously described61 (link),62 (link). Sections were masked and injury was graded by 6 observers and the grades were averaged.
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6

Histological Analysis of Mouse Eyes

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Mouse eyes were enucleated following euthanasia with 5% isoflurane and decapitation. The eyes were oriented with Tissue marker dyes (Richard-Allan Scientific) and fixed in 2% paraformaldehyde; 2.5% glutaraldehyde in 0.1 M sodium cacodylate buffer for 1 hour. The anterior segment and lens was removed and secondary fixation was performed in 1% osmium tetroxide and 0.125% potassium ferrocyanide in 0.1 M sodium cacodylate buffer for 2 hours in dark followed by dehydration in a graded series of alcohol. The eyes cups were then transitioned to propylene oxide and embedded in Embed 812 resin (Electron Microscopy Sciences). Light microscope sections were cut at 0.8 μm thickness, stained with 0.1% Toluidine blue (Electron Microscopy Sciences) and photographed with Axioplan 2 upright microscope using Axiocam MRc5 digital camera and Axiovision 4.6.3 software (Zeiss). Ultrathin sections (80–90 nm) were mounted on copper grids (Electron Microscopy Sciences) and photographed with a JEOL 1200 electron microscope (JEOL).
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7

Transmission Electron Microscopy Tissue Protocol

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Transmission electron tissue samples were fixed in 2.5% glutaraldehyde, buffered in 0.1 M Na-P-buffer overnight, washed 3 times in 0.1 M buffer, postfixed in 1% osmium tetroxide and dehydrated in ascending concentrations of acetone followed by infiltration in epoxy resin (Epon 812, Electron Microscopy Sciences, Hatfield, PA USA).
At least 150 nm toluidine blue (Electron Microscopy Sciences, PA USA)-stained semithin sections per localization were produced. Representative areas were trimmed, and 90 nm lead citrate and uranyl acetate (Electron Microscopy Sciences, PA USA) contrasted ultrathin sections were produced and subsequently viewed under an electron microscope at 60 kV (Jeol 1010, Massachusetts, USA).
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8

Evaluating Myelinated Axons After Stem Cell Transplantation

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Immediately following electrophysiological examination, animals were sacrificed by cervical dislocation and 2mm of tibial nerve was harvested 5mm distal to the suture site. Nerve samples were fixed and processed for light microscopy by preparing 0.5μm sections and staining them with 1% toluidine blue (Electron Microscopy Sciences, 22050).48 (link) Tiled images of the entire nerve cross section were acquired on a Zeiss Axiophot microscope with a 60x objective. The number and density of myelinated axons (healthy axons surrounded by a myelin sheath) were evaluated from four randomly placed squares of equal area in the tibial branch of the sciatic nerve with ImageJ.46 (link),49 (link) Nerve electrophysiology and morphometry results were averaged and compared between alive transplanted hESC- and iPSC-derived Schwann cells (n=2-4/stem cell line, n=8-12 total) and between heat killed transplanted hESC- and iPSC-derived Schwann cells (n=5-3 total) by unpaired t-test. Transplanted hESC- and iPSC-derived Schwann cell results were also pooled and compared between alive and heat killed cells by unpaired t-test with Welch correction for unequal variance (significant p<0.05, Prism 9).
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9

OTAP Tissue Processing for TEM

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The posterior part of the eye was processed as described using the OTAP (osmium-tannic acid-para-phenylenediamine) technique (El-Darzi et al., 2021b (link)). Briefly, the tissue was first fixed in a quarter strength of Karnovsky’s fixative (4% paraformaldehyde and 5% glutaraldehyde in 0.1 M Na cacodylate, pH 7.4) and then sequentially postfixed in 3% glutaraldehyde in 0.1 M Na cacodylate buffer, pH 7.4; 1% OsO4 in 0.1 M Na cacodylate buffer, pH 7.4; 1% tannic acid in 0.05 M Na cacodylate, pH 7.4; and 1% para-phenylenediamine in 70% ethanol. Thick (0.5 μM) sections were stained with toluidine blue (Electron Microscopy Sciences, Hatfield, PA, United States, #22050), and thin sections (70–80 nm) were stained with uranyl acetate (Electron Microscopy Sciences, #22400) and lead salts: acetate (Fisher Scientific, Waltham, MA, United States, #6080-56-4), nitrate (Mallinckrodt Chemicals, Phillipsburg, NJ, United States, #10099-74-8), and citrate (Fisher Scientific, #0-3372). Thin sections were examined by a 1200EX transmission electron microscope (JEOL Ltd., Japan).
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10

Electron Microscopy Sample Preparation

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Human AM samples and hAEC cellular pellets were fixed with 2.5% glutaraldehyde (Electron Microscopy Sciences, Hatfield, PA, USA) in 0.1-M cacodylate buffer (Electron Microscopy Sciences) (pH: 7.2–7.4) for 2–3 h at 4°C and postfixed in 1% osmium tetroxide (Electron Microscopy Sciences) for 1–2 h at 4°C. After dehydration in progressively higher concentrations of alcohol, samples were embedded in Spurr resin (Electron Microscopy Sciences). Semithin sections (0.7–1 μM) were stained with 1% toluidine blue (Electron Microscopy Sciences) and analyzed with a ZEISS Axioskop light microscope (Carl Zeiss, Gottingen, Germany) equipped with a Coolsnap digital camera (Photometrics, Tucson, AZ, USA). Ultrathin sections (70 nm) were cut with a Reichert ultramicrotome (Reichert, Inc, Teramo, Italy), mounted on 200 mesh copper grids (Electron Microscopy Sciences), and counterstained with UranyLess and lead citrate staining solutions (Electron Microscopy Sciences) for 10–15 min/each. Samples were observed under a ZEISS EM109 electron microscope equipped with a Gatan 830Z00W44 camera (Gatan GmbH, Ingolstadterstr. 12 D-80807 München, Germany) and Digital Micrograph application used for acquiring, visualizing, analyzing, and processing digital image data.
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