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53 protocols using beyoecl moon

1

Protein Extraction and Western Blot Analysis

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Cells were lysed in RIPA buffer (solarbio) containing 1 mM PMSF (solarbio) for 30 min at 4°C. After centrifugation at 13,000 × g at 4°C for 30 min, the supernatant fractions were denatured in SDS for 10 min and quantified by BCA Protein Assay Kit (P0012S, Beyotime). Equal amounts of protein were separated by 10% SDS-PAGE and transferred to polyvinylidene difluoride membranes. Membranes were blocked in Blocking Buffe (P0023B, Beyotime) for 1 h at room temperature, and then incubated overnight with primary antibodies at 4°C. Blots were washed by 1 × PBST buffer thrice (5 min each), and then incubation with the Goat Anti-Mouse IgG (H + L)/HRP antibody (bs-40296G-HRP) for 1 h at room temperature. Blots were visualized by using BeyoECL Moon (P0018FS, Beyotime). Protein quantitative analysis was calculated using ImageJ software.
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2

Protein Extraction and Western Blot Analysis

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The total protein was extracted with RIPA buffer (containing 0.1% SDS, 1% protease inhibitor, and 1% phosphatase inhibitor; Solarbio, R0020). Protein quantification was performed using the BCA Kit (Coolaber, SK1070-5000T). 20 μg protein lysis was prepared for SDS-PAGE (6% concentrated gel and 12% and 15% separated gel) and transferred to 0.22 μm Immobilon-PSQ PVDF membrane (Merck Millipore Ltd., ISEQ00010). The membranes were blocked with 5% nonfat-dried milk (Coolaber, CN7861-500G) at room temperature for 2 h, washed 3 times with TBST (Solarbio, No. T1080) for 15 minutes each time, and hatched with primary antibody at 4°C overnight. After being washed, the membranes were hatched with the corresponding secondary antibody at room temperature for 1 h and then washed 3 times with TBST for 15 minutes each time. β-actin was used as an internal control. All immunoreactive protein bands were visualized by BeyoECL Moon (Beyotime, P0018FM-2) and quantified by software Image-Pro Plus 6.0.
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3

Western Blot Analysis of Extracellular Matrix Proteins

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Protein extraction was done with RIPA buffer (Beyotime. China). The concentration was evaluated, denatured, and separated by SDS-PAGE. It was then transferred to PVDF membranes (Beyotime) and blocked with milk (5%) for 2 h before incubation overnight at 4 °C with primary antibodies (1:1000) against Fibronectin (FN), Collagen type IV, and ROCK1 and GAPDH. After, the membranes were incubated with HRP-conjugated secondary antibody (1:1000) for 1 h. The proteins were visualized with BeyoECL Moon (Beyotime, China).
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4

Knockdown of ENO1 in FLS Cells

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According to the GenBank database, the siRNA sequence(TableS2) of rat and human ENO1 gene designed and obtained from JTSBIO Co,Ltd (Wuhan, China). ENO1-siRNA and negative control (NC) vectors were transfected into primary cultured FLS cells of rat and human.
The knees of rat models were embedded in paraffin, sectioned at a thickness of 5-μm, and then stained with hematoxylin and eosin. Cells were lysed using RIPA buffer (Beyotime, China). Protein was electrophoresed with SDS-PAGE gel and transferred to PVDF membrane, blocked using QuickBlock™ Primary Antibody Dilution Buffer (Beyotime, China), and then incubated with the ENO1 antibodies (ab227978, Abcam), GRN antibodies (DF7997, Affinity Biosciences), PTGS2 antibodies (K001561P, Solarbio) and ACSL4 (ab155282, Abcam) at 4°C overnight. Membrane was subsequently incubated with HRP-conjugated secondary antibodies. BeyoECL Moon (Beyotime, China) was used to visualize the protein bands. Detection was performed using an automated chemiluminescence image analysis system (SyngeneG Box chemi xx6, British) and the quantification of the bands was performed using Image J software.
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5

Western Blot Analysis of Apoptosis and Oxidative Stress Markers

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H9C2 cells with different treatment were lysed, quantified and subjected to SDS-PAGE electrophoresis. Proteins were transferred to PVDF membranes (Cat # 1,620,177, Bio-Rad, Hercules, CA, USA) which were incubated with 5% nonfat milk in TBST and followed by incubation of primary antibodies at 4°C overnight. Then the PVDF membranes were washed with TBST and incubated with secondary antibodies. Protein expression was detected using BeyoECL Moon (Cat # P0018FS, Beyotime) under a Tanon 5200 machine (Shanghai, China). The detailed primary and secondary antibodies were listed as below: anti-cleaved caspase 3 (Cat # E83-77, Abcam); anti-caspase 3 (Cat # ab32351, Abcam); anti-Bax (Cat # WL01637, Wanleibio, Shenyang, China); anti-Bcl-2 (Cat # WL01556, Wanleibio); anti-β-actin (Cat # WL01372, Wanleibio); anti-Nrf2 (Cat # WL02135, Wanleibio); anti-Sirt2 (Cat # ab211033, Abcam); anti-HO-1 (Cat # EP1391Y, Abcam); anti-GST (Cat # ab138491, Abcam); anti-NQO1 (Cat # 11,451-1-AP, Proteintech, Wuhan, China); anti-FOXO3a (Cat # 66,428-1-Ig, Proteintech); anti-GCLM (Cat # 14,241-1-AP, Proteintech); anti-Keap1 (Cat # 10,503-2-AP, Proteintech). IgG(H + L)(HRP-labeled Goat Anti-Rabbit IgG(H + L)) and IgG(H + L)(HRP-labeled Goat Anti-Mouse IgG(H + L)) were purchased from Beyotime (Beijing, China). All protein expressions were normalized by β-actin expression.
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6

Protein Expression Analysis by Western Blot

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Proteins from cells were extracted and separated by SDS‐PAGE. After transferred onto PVDF membranes (Millipore), the proteins were blocked with 5% skim milk and then incubated with Bax antibody (dilution 1:800; Abcam), cleaved caspase 3 antibody (dilution 1:800; Abcam), Bcl‐2 antibody (dilution 1:800; Abcam), HMGA2 antibody (dilution 1:800; Abcam) or GAPDH antibody (dilution 1:2000; Abcam) at 4℃ overnight. After washed with TBST buffer, the membranes were incubated with HRP‐conjugated secondary antibodies (dilution 1:5000; Beyotime) and the bands were visualized using BeyoECL Moon (Beyotime).
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7

Quantifying Exosomal Markers in Oral Cancer Cells

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RIPA buffer (Beyotime) was applied for lysing SCC9 and CAL27 cells to isolate total protein. Afterwards, proteins were isolated using 10% SDS-PAGE followed by shifting onto PVDF membranes. Then, 5% skim milk was applied for blocking and primary antibodies were used for incubating membranes overnight at 4 °C. Primary antibodies were listed: anti-CD63 (1:1000, ab134045, Abcam, UK), anti-CD9 (1:1000, ab236630), anti-TSG101(1:1000, ab133586), anti-Calnexin (1:1000, ab133615), anti-p-STAT3 (1:1000, ab76315), anti-STAT3 (1:1000, ab68153), and anti-GAPDH (1:1000, ab9484). Thereafter, membranes were cultivated with goat anti-mouse IgG (HRP) (1:2000, ab6789) for 1 h at 23 °C. BeyoECL Moon (Beyotime) was used for developing and Image J (NIH, USA) was for analyzing bands.
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8

Western Blot Analysis of Apoptosis Markers

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Proteins extracted from hPASMCs using radioimmunoprecipitation assay lysis buffer (Beyotime Institute of Biotechnology, Nanjing, China) were subjected to western blotting. Proteins were quantified using a Micro BCA protein assay kit (Pierce; Thermo Fisher Scientific, Inc.). Total cell lysates (30 μg) were loaded in each lane and separated using 12% SDS-PAGE, and transferred to a polyvinylidene fluoride membrane. The membranes were then blocked with 5% skim milk solution at room temperature for 2 h, followed by overnight incubation at 4°C with the appropriate primary antibodies, including anti-Bcl-2 antibody (ab32124; 1:1,000; Abcam), anti-Bax antibody (ab32503; 1:1,000; Abcam), anti-Caspase-3 antibody (ab13585; 1:1,000; Abcam), anti-Caspase-9 antibody (ab32539; 1:1,000; Abcam), GAPDH (ab8245; 1:2,000; Abcam). Then, membranes were incubated with the appropriate horseradish-peroxidase-conjugated IgG secondary antibodies for (ab97023; 1:5,000; Abcam) 1 h at 25°C. The signals were detected using BeyoECL Moon (Beyotime Institute of Biotechnology) and analyzed using Bio-Rad Laboratories Quantity One software 3.0 (Bio-Rad Laboratories, Inc.).
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9

Quantification of Protein Expression in Lung Tissue

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Total protein was extracted from lung tissue and quantified through the BCA assay. Each sample containing 40 μg of mixed loading buffer was boiled at 100 °C for 15 min. The sample was separated by 10% SDS-PAGE and transferred to a PVDF membrane. The membrane was incubated with QuickBlock™ blocking buffer (P0235, Beyotime) at 25 °C for 10 min and then rinsed with Western wash buffer (P0023C, Beyotime) for 5 min 3 times. Anti-rabbit p-AMPK (dilution: 1:500, ab133448, Abcam, Cambridge, UK), anti-rabbit AMPK (dilution: 1:1000, ab32047, Abcam, Cambridge, UK), anti-rabbit cleaved-caspase-1 (dilution: 1:500, ab179515, Abcam, Cambridge, UK), anti-rabbit cleaved-caspase-3 (dilution: 1:500, ab32351, Abcam, Cambridge, UK) and GAPDH (dilution 1:1000, K106389P, Solarbio) were used for overnight incubation of PVDF membranes at 4 ℃. After rising with Western washing buffer 3 times, the membranes were incubated with goat anti-rabbit secondary antibody (dilution 1:1000, A0562, Beyotime) at 25 ℃ for 1 h. After washing 3 times with Western washing buffer, protein bands were detected using BeyoECL Moon (P0018, Beyotime). The ratio between the gray value of the target protein and the GAPDH bands (internal reference) was calculated using ImageJ.
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10

Western Blot Analysis of NEK6 Protein

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Proteins in cells were extracted with precooled radioimmunoprecipitation assay buffer (catalog number: P0013C; Beyotime, Shanghai, China), and protein quantification was performed using a BCA protein concentration determination kit (catalog number: P0012S; Beyotime). Electrophoresis was performed on a 10% sodium dodecyl sulfate-polyacrylamide gel, and the proteins were then transferred to polyvinylidene fluoride (PVDF) membranes (catalog number: IPFL00010; Millipore, Shanghai, China). After incubation with 5% skim milk at 25°C for 2 h, the PVDF membranes containing the proteins were incubated with diluted NEK6 antibody (catalog number: 10378-1-AP; dilution rate: 1 : 1000; Proteintech, Wuhan, China) or GAPDH antibody (catalog number: 10494-1-AP; dilution rate: 1 : 5000; Proteintech) at 25°C for 2 h. After washing, the PVDF membranes were incubated with diluted goat anti-rabbit IgG modified with horseradish peroxidase (catalog number: SA00001-2; dilution rate: 1 : 2000; Proteintech) at 25°C for 1 h. After washing, the PVDF membranes were covered with BeyoECL Moon (catalog number: P0018FM; Beyotime) for exposure. Quantification by densitometry was performed using ImageJ 1.52v (NIH, Bethesda, MD, USA). GAPDH was used as an internal control.
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