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13 protocols using anti cd19

1

Multiplex IHC Analysis of FFPE Samples

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Multiplex immunohistochemistry of patient FFPE samples was done in sequential staining cycles using the Opal 7-color Automation IHC Kit (Akoya Biosciences, NEL801001KT) on the BOND RX IHC & ISH Research Platform (Leica Biosystems), which was optimized and performed as described before (33 (link), 34 (link)). The multiplex panel consisted of 1:200 anti-CD14 (Cell Marque, 114R-16) with Opal620, 1:200 anti-CD19 (Abcam, ab134114) with Opal690, 1:150 anti-BDCA2 (Dendritics, DDX0043) with Opal540, 1:100 anti-CD1c (Thermo Fisher Scientific, TA505411) with Opal520, 1:100 XCR1 (Cell Signaling Technologies, 44665S) with Opal570 and 1:1500 anti-pan cytokeratin (Abcam, ab86734) with Opal650. Slides were counterstained with DAPI for 5 minutes and enclosed in Fluoromount-G mounting medium (SouthernBiotech, 0100-01). Whole tissue slides were imaged using the microscope Vectra 3 Automated Quantitative Pathology Imaging System (Version 3.0.4, PerkinElmer Inc.). For comparison to the co-cultures with PDTOs, only DAPI, CD1c, and Pan cytokeratin are shown.
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2

Immunomodulatory Effects of Gamma Irradiation

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MCF-7 cells were purchased from the Pasture Institute of Iran (Tehran, Iran). Dulbecco’s modified Eagle’s medium (DMEM), Fetal Bovine Serum (FBS), penicillin, and streptomycin were purchased from Life Technologies Co. (Gibco Life Technologies, Carlsbad, CA). Ketamine and xylazine were purchased from Sigma-Aldrich Co. (St Louis, MO, USA). The Cobalt-60 facility was provided by the Cancer Institute of Imam Khomeini hospital Complex of Iran (Tehran University of Medical Sciences, Tehran, Iran). Mouse monoclonal antibodies of anti-CD19, anti-CD4, and anti-CD8 were purchased from Abcam CO. INF-γ Mouse ELISA Kit (Abcam; ab46081), IL-4 Mouse ELISA Kit (Abcam; ab100710), and IL-17 Mouse ELISA Kit (Abcam; ab100702) were used for IFN-γ, IL-4, and IL-17 serum level assessment. Total RNA was isolated with a Total RNA extraction kit (GRM1002, VIOGENE, Sunnyvale, CA, USA). Template cDNAs were synthesized using SuperScript III (18080-051, Invitrogen, Carlsbad, CA). Quantitative RT-PCR was performed with a quantitative PCR mix (QPK-201T, Toyobo, Osaka, Honshu, Japan) using a real-time PCR detection system (CFX96; Bio-Rad Laboratories).
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3

Isolation and Characterization of ADSCs

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Human abdominal subcutaneous adipose tissues were harvested during liposuction procedures after obtaining signed informed consent in the Department of Plastic Surgery, Affiliated Hospital of Zunyi Medical University, China. ADSC isolation and culture was performed as previously described.15 Briefly, human adipose tissue was minced and digested with 0.075% collagenase type I (Sigma) for 45 minutes at 37°C. After digestion, an equal volume of Dulbecco's modified Eagle's medium (DMEM; Gibco, Carlsbad, California) supplemented with 10% fetal bovine serum (FBS; Gibco) was added and the suspension was passed through a 200 μm mesh filter followed by centrifugation at 800g for 5 minutes). The stromal‐vascular fraction cell pellets were resuspended and cultured at 37°C in 5% CO2 in DMEM supplemented with 10% FBS and 1% penicillin‐streptomycin (Gibco). ADSCs were subcultured at 80% confluence, and passage‐3 cells were used in the study procedures. ADSCs surface marker expression was assayed by flow cytometry. Suspensions of 1 × 106 ADSCs were incubated with anti‐CD90, anti‐CD73, anti‐ CD105, anti‐CD34, anti‐CD11b, anti‐CD19, anti‐CD45, or anti‐HLA‐DR antibodies (1 mg/mL; Abcam) at room temperature for 30 minutes, washed with phosphate‐buffered saline (PBS), and analyzed with a MoFlo XDP flow cytometer (Beckman Coulter, Brea, California) and Kaluza software (Beckman Coulter).
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4

Immunohistochemical Analysis of Kidney Immune Markers

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Immunohistochemistry staining of CD19, IL-10, and C-X-C motif chemokine 13 (CXCL13) in kidney tissues was performed, respectively. Briefly, 4 μm sections obtained from formalin-fixed, paraffin-embedded kidney tissue samples were incubated with 1:500-diluted anti-CD19, 1:1000-diluted anti-CXCL13 (rabbit anti-human; Abcam, Cambridge, UK), and 1:500-diluted anti-IL-10 (rabbit anti-human; Absin, Shanghai, China) primary antibodies overnight at 4°C, followed by Horseradish Peroxidase-conjugated 1:20,000-diluted goat anti-rabbit secondary antibody (Abcam, Cambridge, UK) for 1 h at room temperature and then 3,3′-diaminobenzidine for another 10 min. DAPI appears in blue. Immunohistochemistry images were acquired with an Aperio ScanScope AT Turbo (Aperio, Vista, CA). Numbers of CD19, IL-10, and CXCL13 positivities were scored as follows: 0 positivity, score = zero; 1–5 positivities, score = one; 6–10 positivities, score = two; 11–20 positivities, score = three; >20 positivities, score = four.
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5

Immunofluorescent Staining of Cell Markers

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After dewaxing and hybration, the sectioned samples were blocked with 10% FBS. The sections were incubated with primary antibodies at 4°C overnight. The antibodies used were anti-CD7, anti-CD8, anti-CD14, anti-CD15, anti-CD18, anti-CD19 and anti-carcinoembryonic antigen (CEA) (Abcam, Cambridge, MA, USA). The sections were then incubated with Alexa Fluor 488-conjujated anti-mouse/anti-rabbit secondary antibodies (Cell Signaling Technology, Inc., Danvers, MA, USA), for 1 h at room temperature. Nuclei were stained with Hoechst 33342 (Invitrogen Life Technologies).
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6

Immunophenotyping of Stem Cells

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The SGECs on coverslips were fixed in 4% paraformaldehyde for 10 min, permeabilized with 0.1% Triton X-100 (Sigma) for 20 min at room temperature. Subsequently, 10% FBS was used to block non-specific binding. The SGECs were then incubated with primary antibodies at 4°C overnight. The antibodies that were used were the following: anti-CD7, anti-CD8, anti-CD14, anti-CD15, anti-CD18, anti-CD19, anti-CEA and anti-LGR5 (Abcam). The cells were then incubated with Alexa Fluor 488-conjujated anti-mouse/anti-rabbit secondary antibodies (Cell Signaling Technology, Inc.) for 1 h at room temperature. Nuclei were stained with Hoechst 33342.
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7

Western Blot Analysis of Brain Tissues

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Frozen neocortex, entorhinal cortex, hippocampus, thalamus and cerebellum tissues were homogenized in eight times their volume of RIPA buffer on ice cold for 30 min to completely crack. Homogenates were centrifuged at 12, 000 rpm for 20 min at 4 °C. The supernatant was reserved for Western blotting. Total protein concentration was determined by BCA Protein Assay Kit (Beytoine) and adjusted to 5 mg/ml.
Samples were separated by SDS-PAGE followed by a transfer to polyvinylidene difluoride (PVDF) membranes (Millipore). The membranes were blocked with 5% BSA (Amerso) in TBST buffer at RT for 2 h, and incubated overnight at 4 °C with anti-CD19 (Abcam), β-actin (Bioworld) and GAPDH (Bioworld), then incubated 2 h with HRP-conjugated antibody at RT. The protein bands were visualized using the ECL chemiluminescent substrate (Pierce).
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8

Quantifying CD19 and IL-10 in Thymus Tissue

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The tissues slices were incubated with a polyclonal rabbit anti-IL-10 (bought from Abcam Company, Britain) and mouse monoclonal anti-CD19 (bought from Abcam Company, Britain) antibodies for 16 hours under 4°C at a dilution of 1:300 and 1:100, respectively. Subsequently, the slides were incubated with a mixture of secondary antibody for IF. Both secondary antibodies were used at a dilution of 1:100. Then, CD19/IL-10 Double immunofluorescence staining was observed under Confocal fluorescence microscopy (Olympus, Center Valley, PA, USA), and we performed semi-quantitative analysis by Software Tissuequest 4.0.1.0140. We stained the nucleus with DAPI, spot number of CD19 and IL-10 was collected by the software and DAPI spots number was seemed as reference. We calculated the spots number of CD19 and IL-10/spots number of DAPI, so as to obtain the relative cell counts of CD19 and IL-10 in thymus tissue of different groups.
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9

Flow Cytometry Analysis of ASCs

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A flow cytometric assay of cell surface marker expression was conducted in 1 × 106 ASCs that had been stained with anti-CD90, anti-CD73, anti-CD105, anti-CD34, anti-CD11b, anti-CD19, anti-CD45, and anti-HLADR antibodies (1 mg/ml; Abcam, Cambridge, UK) and suspended in PBS. The samples were incubated for 30 minutes at room temperature, washed with PBS, and then analyzed with a MoFlo XDP flow cytometer (Beckman Coulter, Brea, CA) and Kaluza software (Beckman Coulter).
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10

Immunohistochemical Profiling of LUAD

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LUAD tissues were fixed with 10% formalin and embedded in paraffin. Then, the tissues were cut into 5-μm-thick sections and incubated overnight with primary antibodies anti-CD3, anti-CD4, anti-CD8, anti-CD19, anti-CD20, anti-PD1 (Abcam,UK). The sections were subsequently incubated with a secondary antibody (Abcam,UK) at 37 °C for 1.5 h and stained with a 3,3-diaminobenzidine solution.
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