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48 protocols using ab128568

1

Western Blotting Protein Quantification

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Western blotting analysis was performed as described previously.17 Proteins were fractionated using NuPAGE 4% to 12% Bis‐Tris gels (Invitrogen) and transferred to Protran nitrocellulose transfer membrane (Whatman, Japan). The membrane was blocked using PBS containing 5% nonfat milk for 30 minutes at room temperature and incubated with the primary antibody (anti‐ABCA1: 1:2000, NB400‐105; anti‐ABCG1 (anti‐ATP binding cassette G1): 1:2000, NB400‐132 [Novus Biologicals, CO], anti–carnitine palmitoyltransferase Ia: 1:2000, ab128568 [Abcam, UK]; anti–β‐actin: 1:3000, A5441 [Sigma‐Aldrich]) overnight at 4°C. The membrane was washed in PBS containing 0.05% Tween‐20, and then it was incubated with the secondary antibody (anti‐rabbit IgG horseradish peroxidase linked: 1:2000; anti‐mouse IgG horseradish peroxidase linked: 1:2000 [GE Healthcare, UK]) for 30 minutes at room temperature. The membrane was washed in PBS containing 0.05% Tween‐20 and incubated with ECL Western Blotting Detection Reagent (GE Healthcare) for 5 minutes; then, the signal was detected using an LAS‐4000 system (Fuji Film, Japan).
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2

Immunohistochemistry Analysis of Tumor Tissues

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The tumor tissues fixed in 4% paraformaldehyde (at room temperature for 24 h) were embedded in paraffin and then sectioned into 5-µm-thick slices. Immunohistochemistry was performed using an Instant SABC-POD kit (cat. no. SA1020, Boster Biological Technology) according to the manufacturer's instructions. Briefly, after dewaxing, rehydration and antigen retrieval, the tumor sections were blocked and were then separately incubated with primary antibodies against pan-cytokeratin (AE1/AE3; cat. no. ab27988, Abcam, dilution: 1:200) and CPT1A (cat. no. ab128568, Abcam, dilution: 1:200) overnight at 4°C. After washing, the sections were incubated with biotin-conjugated secondary antibody (cat. no. SA1020, Boster Biological Technology) at 37°C for 30 min. After washing, the sections were incubated with SAB at 37°C for 30 min and stained with DAB (cat. no. AR1027, Boster Biological Technology) at room temperature for 5 min. Following DAB visualization, the sections were immersed into water and then re-stained using hematoxylin at room temperature for 3 min. The AE1/AE3-positive cells or the CPT1A-positive cells were finally observed under a light microscope (Nikon Corporation).
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3

Mitochondrial Isolation and Protein Analysis

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Isolation of mitochondria from mouse heart and colon was performed by differential centrifugation (46 (link)). Twenty micrograms of isolated mitochondria or 50 μg of total protein extracts was resuspended in 4× Laemmli buffer. Proteins were separated by SDS–polyacrylamide gel electrophoresis (PAGE) using 12% precast gels (Invitrogen) and then transferred onto polyvinylidene difluoride membranes (GE Healthcare). Immunodetection was performed according to standard techniques using enhanced chemiluminescence Immun-Star HRP Luminol/Enhancer (Bio-Rad). The following antibodies were used: SDHA (ab14715, Abcam), Ndufs3 (ab14711, Abcam), VDAC/Porin (ab128568, Abcam), ATP synthase subunit alpha (Molecular Probes A21350, Thermo Fisher Scientific), UQCRC1 CIII subunit core1 (Molecular Probes A21362, Thermo Fisher Scientific), COX I (459600, Invitrogen), TFAM (rabbit polyclonal antisera against TFAM generated using recombinant mouse protein), and GAPDH (ab8245, Abcam).
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4

Immunohistochemical Analysis of EOC

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IHC assay was performed to determine the protein expression of NKX2–8 (Abcam, ab125040), CPT1A (Abcam, ab128568) and CPT2 (Abcam, ab181114) in 144 EOC samples. The detailed processes of IHC assay were carried out according to previously published paper [22 (link)]. Axio Imager.Z2 system (Carl Zeiss Co. Ltd., Jena, Germany) was used to capture the immunohistochemistry images.
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5

Hepatic Lipid Regulation Mechanism

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PPL was purchased from Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine (Shanghai, China). Voucher samples were deposited in the Central Laboratory of Shuguang Hospital. Serum biochemical indexes were measured using a full-automatic biochemical analyzer. MDA (Elabscience, E-BC-K025-M, China) and SOD (Elabscience, E-BC-K022-M, China) kits were purchased from Elabscience (Wuhan, China). Liver TC (APPLYGEN, E1026-105, China) and TG (APPLYGEN, E1013-50, China) levels were determined using APPLYGEN assay kits (Beijing, China). Primary antibodies included rabbit anti-PPARγ (CST, #2435, United States of America), rabbit anti-PPARα (Abclonal, A6697, China), mouse anti-CPT1A (Abcam, ab128568, United Kingdom), rabbit anti-CPT2 (Abcam, 181,114, United Kingdom), rabbit anti-SREBP2 (Abcam, ab30682, United Kingdom), mouse anti-HMGCR (Abcam, CL0260, United Kingdom), rabbit anti-CYP7A1 (Abcam, ab234982, United Kingdom), and actin (ABGENT, AP14779b, United States of America).
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6

Comprehensive Protein Expression Analysis

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Western blot was performed as previous described31 (link). The primary antibodies used were as follows: anti-UCP2 (sc-6526, Santa Cruz), anti-PPARα (ab24509, Abcam, Cambridge, MA, US), anti-CPT1α (ab128568, Abcam), anti-fibronectin (F3648, Sigma Aldrich), anti-collagen I (1310–01, Southern Biotech), anti-HIF-1α (ab1, Abcam), anti-PHD2 (4835, Cell Signaling Technology), anti-VDAC (ab14734, Abcam), and anti-Tubulin (T6074, Sigma Aldrich). Western blot were performed at least three times independently. Quantification was performed by measurement of the intensity of the signals with the aid of National Institutes of Health Image software package.
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7

Kidney Injury Protein Analysis

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Western blot was performed using a lysate of kidney cortex or cultured PTECs. The primary antibodies used were as follows: anti-CPT1α (ab128568, Abcam), anti-KIM1 (ab47635, Abcam), anti-NGAL (ab63929, Abcam), anti-E-cadherin (610181, BD Company), anti-AQP1 (ab168387, Abcam), anti-vimentin (ab92547, Abcam), anti-fibronectin (F3648, Sigma Aldrich), anti-collagen I (1310-01, Southern Biotech) and anti-Tubulin (T6074, Sigma Aldrich). Western blot was performed three times independently. Quantification was completed by scanning and analyzing the intensity of hybridization signals by using NIH Image program.
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8

Immunofluorescence Assay for CPT1A and pS63-c-Jun

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Cells were seeded in 6-well plates containing autoclaved glass coverslips. After fixed with ice-cold 100% methanol at −20 °C for 10 min, cells were blocked in Blocking Buffer (5% normal serum, 0.3% Triton X-100 in PBS) at room temperature for 1 h. Then incubating with primary antibody at 4 °C overnight, and incubated in fluorochrome-conjugated secondary antibody diluted in Antibody Dilution Buffer (1% BSA, 0.3% Triton X-100 in PBS) at room temperature in dark for 1 h. Nuclei were counterstained with 4,6-diamidino-2-phenylindole (DAPI). Confocal laser scanning microscopy was performed using Leica TCS SP5 confocal microscope (Leica). Antibody against CPT1A (ab128568) and pS63-c-Jun (ab32385) were purchased from Abcam. The mean fluorescence intensity of the indicated signals in cytoplasm and nucleus were quantified by Image J software.
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9

Immunohistochemical Quantification of CPT1A and PGC1α

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Immunohistochemical (IHC) staining was performed as previously described.41, 42 The results were separately quantified by 2 pathologists from Xiangya Hospital, Changsha, China. The negative to positive patterns (denoted as – to +++) and IHC scores were determined by their staining intensity and positive rate. Anti–CPT1A (ab128568, Abcam) and anti–PGC1α (ST‐1202, Millipore) were used to detect the respective proteins.
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10

Immunohistochemical Analysis of Kidney Metabolic Markers

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Paraffin-embedded kidney sections were deparaffinized, hydrated, antigen retrieved, and endogenous peroxidase activity was quenched by 3% vol./vol. H2O2. Sections were then blocked with 10% vol./vol. normal donkey serum, followed by incubation with anti-PPARα (ab24509, Abcam), anti-CPT1α (ab128568, Abcam), anti-HIF-1α (NB100-123, Novus, New York, NY, USA), anti-HK2 (ab76959, Abcam), or anti-phospho-LDH (8176S, Cell Signaling Technology) overnight at 4 °C. After wash, sections were incubation with secondary antibody for 1 h, followed by incubation with avidin–biotin complex reagents for 1 h at room temperature before being subjected to substrate 3-amino-9-ethylcarbazole (Vector Laboratories, Burlingame, CA, USA). The percentage of positive cells to the selected field was analyzed using Image Pro Plus 6.0 software. An average percentage for each section was calculated. At least ten randomly chosen fields under the microscope were evaluated for each sample, and an average score was calculated.
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