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14 protocols using anti cd36

1

Proteomic Analysis of 3T3-L1 Adipocyte Lipid Rafts

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3T3-L1 adipocytes were incubated in DMEM–high glucose without FBS overnight before the assays. A metabolic labeling assay was performed as described (72 (link)). ABE assay was performed as described (43 (link)). Precipitated and flow-through samples were loaded onto a 4%–20% gradient SDS-PAGE gel (Bio-Rad) and analyzed by blotting onto Immobilon-FL membrane (MilliporeSigma), blocking with Odyssey buffer (LI-COR), and probing with specified antibodies in PBS/0.05% Triton X-100. The following antibodies were used for IP: anti-ANX2 (Abcam, Ab41803), anti-CD36 (Novus, NB400-144), and anti-PHB (MilliporeSigma, HPA003280) at 5 μg IgG/mg protein extract. The following antibodies were used for immunoblotting: anti-ANX2 (Santa Cruz Biotechnology, sc-30757, 1:1000), anti-CD36 (Novus, NB400-144, 1:3000), and anti-PHB (Santa Cruz Biotechnology, sc-18196, 1:500). Signal was detected by Odyssey CLx imaging system (LI-COR). ImageJ (NIH) was used to quantify bands.
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2

Immunohistochemistry of Liver CD36 Expression

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Liver sample preparation and sectioning was performed similar to the procedures described for Oil Red O staining above, except 16 μm sections were used. Liver sections were dried at room temperature and then equilibrated in PBS solution for 20 min. Sections were blocked with 0.3% BSA solution in PBS and incubated with anti-CD36 (1:200, Novus Biologicals, Littleton, CO) overnight. They were then washed three times with PBS for 10 min and subsequently incubated with a goat anti-rabbit antibody (1:1000, Abcam, Cambridge, MA), which was followed by 3 consecutive 10 min PBS washes. Sections were then dried at room temperature and counterstained with DAPI mounting medium (Vector Laboratories, Burlingame, CA). Images were obtained using a light microscopy (Olympus BX43, Center Valley, PA).
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3

Hepatocyte Protein Quantification and Western Blot

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The total protein content from hepatocytes or liver was lysed using RIPA containing protease inhibitor, and the protein content was measured and normalized using a BCA Protein Assay Kit. Total proteins (20–30 μg) were separated by SDS-PAGE and transferred onto PVDF membranes. After blocking with 3% BSA, the membranes were incubated with primary antibodies anti-CD36, 1:2000 (Novus, Colorado, USA); anti-a-SMA 1:500 (Sigma, Poole, Dorset, UK); anti-vimentin 1:1000 (CST, Danvers, USA); and anti-β-actin, 1:3000 (ProteinTech, Wuhan, China) at 4 °C overnight and subsequently incubated with their corresponding horseradish peroxidase-labeled secondary antibodies. Finally, the blot was detected using an ECL advance Western Blotting Detection Kit (Millipore, Temecula, CA, USA). The protein relative intensity was analyzed using ImageJ software (National Institutes of Health, USA).
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4

Western Blot Analysis of Cardiac Proteins

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Protein concentration in heart tissue lysates was measured using the bicinchoninic acid method (Thermo Scientific, 23227, Waltham, MA, USA). Equivalent amounts of each protein extract were loaded into each well, separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and transferred to a nitrocellulose membrane. Blots were probed with the following antibodies: anti-βMHC (Abcam, Cambridge, UK, ab50967), anti-MyBPC3 (Santa Cruz Biotechnology, Dallas, TX, USA, sc-137237), anti-PPARα (Abcam, ab34509), anti-PPARβ/δ (Cell Signaling, Danvers, MA, USA, 2443S), anti-CD36 (Novus Biologicals, Minneapolis, MN, USA, NB400-144), anti-CPT1α (Abcam, ab1285568), anti-GLUT4 (Abcam, ab33780), anti-Akt (Cell Signaling, 9272S), anti-pS473 Akt (Cell Signaling, 9271S), anti-GSK3β (Cell Signaling, 5676S), anti-pSer9 GSK3β (Cell Signaling Technology, 9336S), and GAPDH (Proteintech, HRP-60004). Signals were visualized using the ChemiDoc Touch Imaging System (Bio-Rad, Hercules, CA, USA). Image Lab Software version 6.0.1 (Bio-Rad) was used to quantify the differences in the fold induction of protein expression normalized to that of GAPDH.
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5

Immunofluorescence Staining of Cellular Organelles

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After the indicated treatments as described in the figure legends, frozen slices or cells were fixed with 4% paraformaldehyde for 15 min at 37 °C and incubated with 0.2% Triton X100 for 15 min at room temperature. After blocking with 3% bovine serum albumin, the slices were incubated with primary antibodies. The following primary antibodies were used: anti-CD36 (#NB600-1423, Novus Biologicals), anti-SELK (#ab121276, Abcam), anti-SEC24 (#15958-1-AP, Proteintech), anti-His-Tag (#12698S, Cell Signaling Technology), anti-Calnexin (#66903-1-Ig, Proteintech), anti-GM130 (#11308-1-AP, Proteintech), anti-Golgin97 (#12640-1-AP, Proteintech), anti-TGN46 (#MA3-063, Invitrogen). After overnight incubation at 4 °C, the slices or cells were then incubated with fluorescence-conjugated secondary antibodies for 1 h. Finally, the slices or cells were incubated with DAPI for 3 min, and then, fluorescence images were captured using a Leica TCS SP8 confocal laser scanning microscope (Leica, Germany) and analyzed using Fiji ImageJ software.
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6

Hepatic Protein Profiling by Western Blot

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Protein extracts from liver tissue or cells were lysed in RIPA buffer, and cytoplasmic and nuclear proteins were extracted from HepG2 cells or liver tissue using a commercial kit (Beyotime Biotechnology, Wuhan, China). The lysates were separated by SDS-PAGE and transferred to PVDF membranes. The membranes were incubated overnight with primary antibodies at 4°C and then incubated with HRP-conjugated secondary antibodies for 2 hours. Immunoreactive protein was detected using an ECL Advance Western Blotting Detection kit (Amersham Bioscience, Piscataway, US). A quantitative analysis was performed using Image J software (V1.53k). The following primary antibodies were purchased: anti-CD36 (1:2000, Novus, cat# NB400-144), anti-Per1 (1:2000, LifeSpan, cat# LS-C807611), anti-AKT (1:1000, CST, cat# 4691S), anti-p-AKT (1:2000, CST, cat# 4060S), anti-PI3K (1:1000, CST, cat# 4257T), anti-p-PI3K (1:500, GeneTex, cat# GTX132597), anti-FoxO1 (1:1000, CST, cat# 2880S), anti-p-FoxO1 (1:1000, CST, cat# 9461T) anti-G6pase (1:2000, Santa Cruz, cat# sc-167939), anti-PEPCK (1:2000, Santa Cruz, cat# sc-32879) and anti-β-actin (1:5000, Bioss, cat# bs-0061R).
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7

Immunoblotting and Co-Immunoprecipitation Assay

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Equal amounts of protein were resolved and immunoblotted with anti-CD36 (Novus Cat# NB400-144, RRID:AB_10003498), anti-actin (Proteintech Cat# 20536-1-AP, RRID:AB_10700003), anti-NF-κB p65 (Santa Cruz Biotechnology Cat# sc-8008, RRID:AB_628017), anti-Caspase-1 (Proteintech, 22915-1-AP), anti-IL-1β (Proteintech Cat# 16806-1-AP, RRID:AB_10646432), anti-LaminB1 (Proteintech Cat# 12987-1-AP, RRID:AB_2136290), anti-P62 (Abcam Cat# ab109012, RRID:AB_2810880), anti-IP3R1 (GeneTex, GTX133104), anti-phospho-IP3R1 (Thermo Fisher Scientific Cat# PA5-64735, RRID:AB_2662549), and anti-Fyn (Proteintech, 66606-1-lg) primary antibodies. For co-immunoprecipitation (co-IP), equal amounts of lysate proteins were incubated (4°C) with anti-mouse CD36 (Novus Cat# NB600-1423, RRID:AB_789115) overnight before protein G magnetic beads were added (Millipore) (1–3 h). Bound proteins were eluted by boiling for 5 min in SDS sample buffer, and the cleared supernatants were resolved by SDS-PAGE. Detection was performed with the Chemidoc Imaging System (Bio-Rad) and ECL Plus reagent (Amersham). The band intensity was analyzed by densitometry software (ImageJ).
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8

Co-Immunoprecipitation of CD36 and NKA

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For co-immunoprecipitation of CD36 and NKA α1, adipocytes were lysed in CelLytic Lysis Reagent (Sigma) with protease inhibitor cocktail (Roche) and phosphatase inhibitors (Sigma). Cell lysates were pre-cleared with agarose beads (Life Technologies) for 1 h at 4°C. Cleared supernatant with 1 mg protein was incubated with 2 μg of anti-CD36 IgA (Thermo Scientific) or 2 μg of non-specific IgA as negative control for 2 h at room temperature. Then agarose beads were added and incubated overnight at 4°C. Beads were extensively washed with the lysis reagent and boiled in SDS-PAGE loading buffer, and the bound proteins were analyzed by immunoblots using anti-NKA α1 (Developmental Studies Hybridoma Bank). The membranes were striped and re-probed with anti-CD36 (Novus). Total cell lysates were also probed with anti-NKA α1 and anti-CD36 as input control.
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9

Western Blot Antibody Dilutions Protocol

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Protocol used for western blotting has been described previously28 (link). The following dilutions of antibodies were used: anti-CD36 (1:2000, Novus, Cat# NB400-144), anti-AKT(1:1000, CST, Cat#4691T), anti-p-AKT (1:2000, CST, Cat#4060S), anti-mTOR/anti-p-mTOR (1:1000, CST, Cat#2983S/5536S), anti-PI3K(1:1000, CST, Cat#4257T), anti-p-PI3K (1:500, GeneTex, Cat# GTX132597), anti-Src (1:1000; CST, Cat#2109T), anti-p-Src(1:1000; CST, Cat#6943T), and anti-β-actin (1:5000, Bioss, Cat# bs-0061R). The relative protein levels were semi-quantified by ImageJ software.
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10

Protein Extraction and Western Blot Analysis

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Skeletal muscles were homogenized in a lysis buffer (50 mM Tris-HCl, pH 7.5, containing 1% Triton X-100, 150 mM NaCl, 1% sodium deoxycholate, 0.1% SDS, 2 mM EDTA, 1 mM phenylmethylsulfonyl fluoride, 1 μg/ml aprotinin, 10 μg/ml leupeptin, 1 mM DTT, 1 mM Na3VO4, 10 mM NaF, 10 mM NaPPi, and 10 mM NaMo) and centrifuged at 20,000 × g for 15 min at 4°C. C2C12 myotubes were sonicated in a lysis buffer and centrifuged at 20,000 × g for 15 min at 4°C. The supernatants from homogenates and lysates were subjected to SDS-PAGE and analyzed by Western blot analysis using mouse monoclonal antibodies [anti-MyHC I (clone BA-D5; Developmental Studies Hybridoma Bank, University of Iowa, Iowa City, IA), anti-MyHC IIB (clone BF-F3; Developmental Studies Hybridoma Bank, University of Iowa), and anti-β-actin (clone 2D4H5, Proteintech Group, Inc., Chicago, IL) antibodies], and rabbit polyclonal antibodies [anti-HIF-1α (Bethyl Laboratories; Montogomery, TX) and anti-CD36 (Novus Biologicals; Littleton, CO) antibodies]. The immunoreactive proteins were incubated with horseradish peroxidase-conjugated goat anti-rabbit IgG (BioRad, Hercules, CA) and anti-mouse IgG (BioRad) and reacted with Immobilon Western Chemiluminescent HRP Substrate (Millipore, Billerica, MA), followed by detection with an LAS4000 imaging system (GE Healthcare UK Ltd., Little Chalfont, Buckinghamshire, UK).
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