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3 protocols using xrcc4

1

DNA Damage Response Pathway Antibodies

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DAPI (Cat #MBD0015), doxorubicin (Cat #D1515), H2O2 (Cat #H1009), and β-tubulin antibodies (Cat #T4026) were purchased from Sigma-Aldrich. Antibodies against His tag (Cat #12698), H2A (Cat #12349), H2A.X (Cat #7631), γ–H2A.X (Cat #2577), Ku80 (Cat # 2753), and Rad51(Cat #8875) were purchased from Cell Signaling Technology (Danvers, MA, USA). 53BP1(Cat #NB100-304) and RNF168 (Cat #H00165918–M01) antibodies were obtained from Novus Biologicals (Novus Biologicals, Littleton, CO, USA). Lamin B (Cat #sc–374015), ATM (Cat #sc–135663), DNA–PK (Cat #sc–5282), and BRCA1(Cat #sc–28383) antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). XRCC4 (Cat #PA5–82264) antibody was purchased from Thermo Fisher Scientific (Waltham, MA, USA).
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2

DNA Damage Response Protein Profiling

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Antibodies used were: RAD51AP1 (Proteintech), XRCC4 (Thermo Fisher Scientific), RAD51 (Santa Cruz), γH2AX (Millipore), γH2AX (Cell Signaling), RPA32 (Thermo Fisher Scientific), PCNA (Santa Cruz), Flag (Sigma), S9.6 (Millipore), mouse or rabbit control IgG (Diagenode), β-actin (Bethyl), GAPDH (Millipore).
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3

Immunoblotting Analysis of DNA Repair Proteins

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Harvested cells were lysed for 30 min on ice in Nonidet P-40 buffer (200 mM NaCl, 1% Nonidet P-40,50 mM Tris·HCl pH 8.0) or IP lysis buffer (0.75% CHAPS, 10% (vol/vol) glycerol, 150 mM NaCl, 50mM Tris pH 7.5) freshly supplemented with protease inhibitors. Protein samples were resolved by SDS-PAGE and probed with indicated antibodies: anti-SIRT2 (Abcam ab67299 or Santa Cruz sc-20966), GAPDH (Santa Cruz sc-25778 or sc-47724), FLAG (Sigma F4042), GFP (Abcam Ab6556), anti-DNA-PKcs (Thermo Fisher, PIMA513244 or Invitrogen, MA5-132238), Artemis (Abcam, ab3834), anti-Artemis phospho Ser516 (Genetex, GTX32292), XRCC4 (Thermo Fisher Scientific, MA5-24383), XRCC4 phospho Ser260 (Thermo Fisher Scientific, PA5-64731), Cyclin A (BD BioScience, 611268) and α-Tubulin (Sigma, T6074). Detection was performed with the Odyssey system.
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