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9 protocols using anti cd11b bv421

1

Isolation and Characterization of Mouse Immune Cells

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The peripheral blood was obtained through the jugular vein of mice and mononuclear cells
were isolated through erythrocyte lysis. The cells were stained with anti-mCD45-FITC,
anti-CD45.2-BV711 (BD Bioscience, East Rutherford, NJ, USA), anti-CD3-PE, anti-CD3-APC,
anti-CD19-PE/Cy7, anti-CD11b-BV421 and anti-Gr-1-BV510 (BioLegend, San Diego, CA, USA) to
identify lymphoid and myeloid lineages of cells. Anti-CD132-PE (clone TUGm2, BioLegend)
was used to detect IL2RG protein. Flow cytometry was performed with BD LSR Fortessa II,
The BD FACS Aria Fusion (BD Bioscience).
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2

Characterizing Intestinal Immune Cells

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Small intestinal lamina propria cells were resuspended in a 1:50 dilution of FC block [BD Pharmingen; Clone 2.4G2] in FACS buffer containing 5 mM EDTA and incubated on ice for 10 min. Cells were then stained with fluorophore-conjugated primary antibodies for 30 min on ice before fixing with 2% PFA: anti-CD45 FITC [BioLegend; clone 30-F11], anti-CD19 APC [BD; clone 1D3], anti-CD3 Alexa Fluor 700 [BioLegend; clone 17A2], anti-Ly6G BV510 [BioLegend; clone 1A8], anti-F4/80 PE [BioLegend; clone BM8] and anti-CD11b BV421 [BioLegend; clone M1/70]. Splenocytes were used for single colour controls. Samples were run on a NovoCyte Advanteon Flow Cytometer system [Agilent] and data analysis was performed using FlowJo [version 10.7.1].
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3

Murine Macrophage Activation and Infection

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Macrophages were derived from the bone marrow of naïve mice in IMEM medium (Life Technologies) supplemented with 10% FBS, pen/strept, L-glutamine, and 15% L929 cell-conditioned medium as a source of colony-stimulating factor-1 (CSF-1). Cells were then left for 6 days at 37°C in a 5% CO2 incubator. For one set of experiments, BMM were washed and resuspended in supplemented DMEM. Cells were classically activated (M1) with 20 ng/ml of murine IFNγ (Peprotec), alternatively activated (M2) with 20 ng/ml of murine IL-4 (Peprotec), or infected with L. donovani amastigotes at a MOI of 1:10. BMM were then incubated for 24h and stained with anti-CD11b-BV421, iNOS-APC (Biolegend), and CD38-BV711 (eBioscience) or processed for qPCR analysis. Samples were acquired on a BD LSRFortessa cell analyzer (Becton Dickinson).
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4

Multicolor Flow Cytometry Immune Profiling

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All fluorophore-conjugated antibodies were obtained from Biolegend: anti-CD45-FITC, anti-CD206-PE, anti-F4/80-PE/Cy7, anti-CD115-APC, anit-IA/IE-APC/Cy7, anti-CD3-BV421, anti-FoxP3-FITC, anti-CD45-PE, anti-CD4-PE/Cy7, anti-RoRγt-PE/Cy7, anti-CD8a-APC/Cy7, anti-Granzyme B-FITC, anti-PD-1-APC, and anti-CD11b-BV421. Cell staining was performed for 1 hour at 4 °C, with 2% rat serum (Sigma) to reduce antibody binding to Fc receptors. In all conditions, doublets and multiplets were excluded by forward scatter pulse width (FSC-W) vs. forward scatter pulse area (FSC-A) gating and live cells were selected via negative selection for Yellow Amine Dye (Life Technologies) staining. Gating of positively stained cells was determined by fluorescence-minus-one (FMO) controls. Cells were analyzed using an 8-color MACSQuant 10 (Miltenyi Biotec) with three laser sources (405 nm, 488 nm, 635 nm) and FlowLogic 501.2 A software (Inivai Technologies).
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5

Multicolor Flow Cytometry and Molecular Analyses of Immune Cells

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For flow cytometric analysis, anti-CD45.2-V500(562129, BD bioscience, 1:100), anti-CD45.2-APC(109814, BioLegend, 1:100), anti-CD4-PerCP/Cy5.5(100433, BioLegend, 1:100), anti-CD8a-PerCP/Cy5.5(100733, BioLegend, 1:100), anti-CD11b-PerCP/Cy5.5(45-0112-80, eBioscience, 1:100), anti-Ly6G-PerCP/Cy5.5(127615, BioLegend, 1:100), anti-B220-PerCP/Cy5.5(103235, BioLegend, 1:100), anti-CD11b-BV421(101251, BioLegend, 1:100), anti-CD64-APC(139306, BioLegend, 1:100), anti-F4/80-PE(123110, BioLegend, 1:100), anti-Ly6c-PE-Cy7(128018, BioLegend, 1:100) were used. For western blotting, anti-Cx40(AB1726, Merck Millipore, 1:500), anti-Cx43(C6219, Sigma, 1:2000), anti-Cx45(AB1745, Merck Millipore, 1:2000), anti- α -tubulin(T6199, Sigma, 1:1000), anti-rabbit IgG-HRP(7074, Cell Signaling Technology, 1:5000), anti-mouse IgG-HRP(7076, Cell Signaling Technology, 1:5000) were used. For immunohistochemistry, anti-F4/80(MCA497G, Serotec, 1:500), anti-Ly6G(127601, BioLegend, 1:500), anti-B220 (103201, BioLegend 1:500), anti-CD3(GTX42110, GeneTex, 1:500), anti-Cx43(C6219, Sigma, 1:2000), anti-N-cadherin(33-3900, ThermoFisher, 1:500) were used. The second antibodies used were Alexa-Fluor-488-conjugated anti-mouse-IgG(A-11001, ThermoFisher, 1:2000) and Alexa-Fluor-635-conjugated anti-rabbit-IgG(A-31576, ThermoFisher, 1:2000).
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6

Multicolor Flow Cytometry Analysis of Immune Cells and Platelet Activation

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Peripheral blood was obtained through a jugular vein and mononuclear cells were isolated through erythrocyte lysis. The cells were stained with anti-mouse CD45-fluorescein isothiocyanate (FITC) (BD PharMingen), anti-CD3-PE, anti-CD19-PE/Cy7, anti-CD11b-BV421, anti-Gr-1-BV510, and anti-CD132-APC (BioLegend) to identify lymphoid and myeloid lineages. Washed and activated platelets were stained with Brilliant Violet 421-labeled anti-mouse CD41 (BioLegend), DyLight 649-labeled rat anti-mouse GPIbα (CD42b), phycoerythrin (PE)-labeled anti-activated integrin αIIbβ3 (JON/A), and FITC-labeled anti-mouse CD62P (Anti-P-Selectin) (Emfret Analytics, Eibelstadt, Germany) antibodies. Flow cytometry was performed with BD LSRFortessa II.
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7

Immunoblotting, Immunofluorescence, and Flow Cytometry Analysis

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The following antibodies were used for immunoblotting, immunofluorescence, and flow cytometry analysis: anti-Caspase-1 (ab179515; Abcam), anti-NLRP3 (ab263899; Abcam), anti-ASC (sc514414; Santa Cruz), anti-NF-κB P50 (ab32360; Abcam), anti-NF-κB P65 (cst6956; Cell Signaling Technology), anti-phospho–NF-κB P65 (cst3033; Cell Signaling Technology), anti-MyD88 (ab219413; Abcam), anti-IKK-β (ab124951; Abcam), anti-TRAF6 (ab33915; Abcam), anti-GPR81 (ab106942; Abcam), anti-tubulin (11224; Proteintech), anti-pro-IL-1β (cst12242; Cell Signaling Technology), anti–F4/80-PE (123110; BioLegend), anti–CD11b-BV421 (101236; BioLegend), anti–CD68-APC (137007; BioLegend), anti–CD206-AF647 (141712; BioLegend), anti–Ly6G-FITC (11–9668-80; eBioscience), anti-CD16/32 (14–0161-82; eBioscience), anti-CD11b (2185-1-ap; Proteintech), anti-F4/80 (cst70076; Cell Signaling Technology), anti-Ly6G monoclonal antibody (65140-1-ig; Proteintech).
The following reagents were used for this study: caerulein (C9026-1 MG; Sigma, Munich, Germany), ELISA kit for IL-1β, IL-6 and TNF-α (Lianke), alpha-amylase determination kit (BIOSINO, Beijing, China), PBMC isolation kit (LTS1092; TBD), LPS from Escherichia coli O55:B5 (Sigma, Germany), L-lactate assay kit (ab65330; Abcam), sodium L-lactate (L7022; Sigma), L-lactic acid (L1750; Sigma).
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8

Microglial and Macrophage Cytokine Profiling

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Direct ICS was performed as previously described (Cusick et al., 2013 (link); Liu and Whitton, 2005 ). Briefly, animals were retro-orbitally injected with 250 μg Brefeldin A (SigmaAldrich), an inhibitor of protein transport, 6 hours before being sacrificed. Brains were immediately collected and processed on ice. Extracellular staining was carried out using anti-CD45-V500 (BD Biosciences, San Jose, CA) and anti-CD11b-BV421 (BioLegend, San Diego, CA) in order to distinguish microglial (CD45low/intCD11b+), macrophage (CD45hiCD11b+), and lymphocyte (CD45hiCD11b) cell types. Cells were then treated with cytoperm/cytofix (BD Biosciences) and stained with anti-TNF-α-Pe-Cy7 (BioLegend) and anti-IL-6-PE (eBioscience). Gating for all flow cytometry experiments was determined by Fluorescence-minus-one (FMO) for CD45, CD11b, TNF-α, and IL-6 antibodies.
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9

Annexin V-FITC Apoptosis, Cell Cycle, and Differentiation Analysis

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The Annexin V-FITC Apoptosis Detection kit (Dojindo) was used for apoptosis assays. Cells were harvested and washed twice with cold PBS. After being suspended in 1 × Annexin V binding buffer, cells were stained with Annexin V-FITC and propidium iodide (PI) for 15 min on ice. For cell cycle assays, a DNA labeling solution (Cytognos) was used. Briefly, after collection and washing with cold PBS, cells were stained with DNA labeling solution for 15 min at 25 °C. For cell differentiation assays, human AML cells were harvested and washed with cold PBS; peripheral blood (PB), BM, and spleen cells were harvested from AML1-ETO9a AML mice, and erythrocytes were lysed using RBC Lysis Buffer (00-4333-57, Invitrogen). Human AML cells were stained with anti-human CD11b (301310, Biolegend) and isolated mice cells were stained with anti-CD11b-BV421 (101251, Biolegend) for 30 min on ice. Stained cells were analyzed using a CytoFLEX S Flow Cytometer (Beckman Coulter).
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