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Q exactive plus combined quadrupole orbitrap mass spectrometer

Manufactured by Thermo Fisher Scientific
Sourced in Japan, United States

The Q Exactive Plus combined quadrupole Orbitrap mass spectrometer is a high-resolution, accurate-mass (HRAM) instrument designed for advanced proteomic, metabolomic, and small molecule analysis. It combines a quadrupole mass filter with a high-field Orbitrap mass analyzer, enabling precise mass measurements and high-throughput data acquisition.

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2 protocols using q exactive plus combined quadrupole orbitrap mass spectrometer

1

Untargeted Metabolomic Profiling of Muscle Exudate

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The untargeted metabolomic analysis of the exudate was performed according to our previous report (Liu et al., 2022 (link)). Untargeted metabolomics profiling was analyzed with a UPLC-ESI-Q-Orbitrap-MS system (Ultra High Performance Liquid Chromatography, Nexera X2 LC-30AD, Shimadzu CO., Kyoto, Japan; Q Exactive Plus combined quadrupole Orbitrap mass spectrometer, Thermo Scientific, CA, USA). Samples consisted of muscle exudate aged for 1, 2, 4 and 6 days and four sets of quality control (QC) samples with an equal volume mix of exudate. Metabolites were extracted from the exudate residue by vortexing 100 µL of a sample with 400 µL of 4 °C methanol–acetonitrile (v/v, 1:1) and sonicated in an ice bath for 1 h. The mixture was incubated at −20 °C for 1 h and then centrifuged at 14,000 × g, 4 °C for 20 min. The supernatant was collected and freeze-dried under a vacuum. The metabolites were separated using hydrophilic interaction liquid chromatography (HILIC) after re-dissolution using 50 % acetonitrile and filtration through 0.22 µm cellulose acetate. Mass spectrometric detection was performed using electrospray ionization (ESI) in positive and negative modes to acquire metabolite MS data.
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2

Rapid Separation and Analysis of Metabolites

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Rapid separation of DISS metabolites by UHPLC was performed on a Thermo Vanquish Flex Binary RSLC platform (Thermo Fisher Scientific, Waltham, MA, USA). Samples were separated on a Thermo Accucore aQ C18 (150 × 2.1 mm, 2.6 µm; Thermo Fisher Scientific, Waltham, MA, USA) maintained at 40 °C. The mobile phase consisted of 0.1 formic acid water (A) and methanol (B). Gradient elution was performed as follows: 0–3 min, 0–20% B; 3–8 min, 20–35% B; 8–14 min, 35–70% B; 14–18 min, 70–75% B; 18–21 min, 75–95% B; 21–28 min, 95–97% B; 28–30 min, 97–100% B and 30–45 min, 100% B. The flow rate was 0.3 mL/min and the injection volume was 3 µL.
Analysis of the metabolites was performed using a Q Exactive Plus combined quadrupole Orbitrap mass spectrometer (Thermo Fisher Scientific, Waltham, MA, USA). Analysis was performed using electron spray ionization in both positive and negative ion modes, and the specific parameters were set as follows: capillary temperature, 350 °C; spray voltage, 4 kV/3.5 kV (positive/negative); sheath gas, 50 arb; auxiliary gas, 10 arb; and probe heater temperature, 320 °C. Full-scan analysis, from m/z 150–1500 with a resolution of 70,000, was performed under positive and negative ion modes. Collision-induced dissociation was performed using an isolation width of 2 Da, and 30% maximum of collision energy.
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