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The NCI-H358 is a cell line derived from a human lung adenocarcinoma. It is commonly used in laboratory research applications.

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114 protocols using nci h358

1

Cell Line Cultivation and CRISPR Editing

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The cell lines HCT-116, NCI-H358 and HFL-1 were purchased from the American Type Culture Collection (ATCC). HCT-116 (ATCC CCL-247™) was derived from a male patient with colorectal carcinoma. NCI-H358 (ATCC CRL-5807™) was derived from a male patient with non-small cell lung cancer. HFL-1(ATCC® CCL-153™) cells were derived from human lung tissue. HCT-116 and NCI-H358 cells were cultured in RPMI1640 medium containing 10% FBS. HFL-1 cells were cultured in F-12K Medium containing 10% FBS. The dCas9-HDAC1: crRNA: tracrRNA RNP complex was transfected into cells using Lipofectamine RNAiMAX Reagent following the manufacturer’s protocol.
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2

Functional Modulation of Claudin-7 in Cancer Cells

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Lung adenocarcinoma cell line HCC827, lung carcinoma cell line NCI-H358 (H358) and mammary ductal carcinoma cell line T-47D were purchased from ATCC (Manassas, VA) and grown in RPMI 1640 culture medium containing 10 % FBS, 100 units/ml of penicillin, and 100 μg/ml streptomycin in a humidified air (5 % CO2 atmosphere) at 37 °C. Each of three lentivirus claudin-7 shRNA vectors (sequences #1: 5′-TTCCAAGGAGTATGTGTGA-3′; #2: 5′-GGCTATGGGAGTGTCTAGA-3′; #3: 5′-TCCCTACCAACATTAAGTA-3′) or one off-target shRNA control vector were transfected into HCC827, H358 or T-47D cells. The cells infected with #2 lentivirus claudin-7 shRNA vector are designated as KD cells, and the cells infected with #3 shRNA vector are designated as KD2 cells. All lentivirus vectors contain a GFP expression sequence. After 48 h incubation, transfected cells were selected by 1 μg/ml puromycin.
The pcDNA3.1 myc or pcDNA3.1-claudin-7-myc (mouse claudin-7 cDNA) was transfected into HCC827 claudin-7 KD cells using Amaxa Nucleofector device (Amaxa Biosystems, Cologne, Germany). Geneticin (G418) was added to select the transfected cells.
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3

Cell Culture Protocols for Diverse Cell Lines

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HeLa (ATCC CCL-2) and Huh7 (Apath, LLC) cells were cultivated in Dulbecco’s Minimal Essential Medium (DMEM) supplemented with 7.5% fetal bovine serum (FBS), non-essential amino acids, and penicillin/streptomycin. HEK293T/17 (ATCC CRL-11286), Vero (ATCC CCL-81), NCI-H358 (ATCC CRL-5807), and A549 (ATCC CCL-185) cells were cultivated in DMEM supplemented with 10% FBS. Primary human lung microvascular endothelial cells (HMVEC-L) cells (Lonza CC-2527) were cultivated using EGM-2 MV BulletKit (Lonza CC-3202). Human peripheral blood macrophages (Stemcell Technologies) were cultivated in Macrophage-SFM (Gibco). All cells were incubated at 37 °C in 5% CO2.
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4

Lung Adenocarcinoma Cell Lines: Cultivation and Characterization

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Lung adenocarcinoma cell lines, including NCI-H1650, NCI-H1299, LTEP-a 2, NCI-H1975, CaLu-3, A549, PG49, NCI-H358, NCI-H1299 and HEY-293T, were obtained from ATCC. The cell lines were maintained in Roswell Park Memorial Institute (RPMI) -1640 containing 10% fetal bovine serum (FBS; Invitrogen, USA).
The lung carcinoma tissues and clinical data obtained from our institute were approved by the Institutional Review Board of China (approval ID 81470137). We also subjected the cell lysates from the clinical specimens to Western blot analysis.
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5

Generating Stable Cell Lines Expressing mCherry-GAL9

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HeLa (CCL-2), HepG2 (HB-8065) and NCI-H358 (CRL-5807) cells were purchased from ATCC whilst Huh7 (Riken - RCB1366) were a kind gift from Prof. Samir El-Andaloussi (KI, Stockholm), all cell lines were authenticated by STR profiling and tested negative for mycoplasma contamination. Cells were maintained at 37 °C in a humidified incubator in a complete media of DMEM + Glutamax (Huh7, HeLa, HepG2) or RPMI + Glutamax (NCI-H358 cells) both supplemented with 10% foetal bovine serum.
Stable cells expressing mCherry-GAL9 were generated by knock-in at the AAVS1 locus. Cells were seeded at 2 × 105 cells/well (12-well) and transfected with mCherry-GAL9 reporter:AAVS1 zinc-finger nuclease (1:9) using FuGENE HD transfection reagent (Promega) as per manufacturer’s instructions. Cells were incubated for 48 h before the addition of 1 µg/ml Puromycin to select for stably integrated cells. Stable cells were subsequently sorted into similar expression pools by flow cytometry.
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6

Paired NSCLC and Noncancerous Lung Tissue Samples

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Paired NSCLC and corresponding noncancerous lung tissues were obtained from 24 consecutive patients with informed consent in our department. Tissues were snap-frozen in liquid nitrogen. NSCLC cell lines A549, NCI-H23 and NCI-H358 cells, and normal GNHu27 cells were purchased from ATCC. The cell lines were maintained in RPMI-1640 medium containing 10% FBS at 37 °C in a humidified atmosphere containing 5% CO2. Transfection was performed using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA) according to the manufacturer’s protocol.
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7

Investigating NSCLC Cell Line Responses

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NSCLC cell lines, A549, and NCI-H358 (hereafter H358) were obtained from ATCC in 2014. The cells were grown in RPMI-1640 medium with 10% fetal bovine serum (FBS) and antibiotics-antimycotics (#15240-062, Invitrogen, Carlsbad, CA, USA), at 37 °C and 5% CO2, and controlled every month for mycoplasma contamination. Recombinant human TGF-β1 was from R&D Systems (Minneapolis, MN, USA). The inhibitors EPZ5676, SGC0946, PFI-1, and SAHA were purchased from Cayman (Ann Arbor, Michigan, USA). The antibodies are listed in Additional file 1.
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8

Isogenic Cell Line Generation for Cancer Research

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All cell lines were maintained in RPMI supplemented with 10% FBS and incubated at 37C with 5% CO2. The following cell lines were used in this study: NCI-H358 (ATCC Cat# CRL-5807, RRID:CVCL_1559), NCI-H292 (ATCC Cat# CRL-1848, RRID:CVCL_0455), NCI-A549 (ATCC Cat# CRM-CCL-185, RRID:CVCL_0023), NCI-H460 (ATCC Cat# HTB-177, RRID:CVCL_0459). Identity of cell lines were confirmed by STR profiling, and all lines tested mycoplasma negative. Isogenic A549 and H460 lines reconstituted with pInducer20-GFP (RRID:Addgene_44012), pInducer20-LKB1 (product of RRID:Addgene_44012 and RRID:Addgene_82320), or pInducer20-KEAP1 (product of RRID:Addgene_44012 and RRID:Addgene_81925) were obtained by lentiviral transduction under Neomycin selection (1000ug/mL). These lentiviral vectors were engineered using a gateway cloning protocol (Gateway LR Clonase II, Invitrogen, cat# 11791–020).
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9

Non-Small Cell Lung Cancer Cell Lines

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Human NSCLC cell lines (NCI-H460, NCI-H358 and A549) were obtained from ATCC. All cell lines were grown in RPMI medium supplemented with 10% fetal bovine serum (FBS) and antibiotics and incubated at 37 °C in a humidified atmosphere with 5% CO2.
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10

Cytotoxic Effects of Asbestos on Lung Cells

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Human lung cancer cell lines (NCI-H358, ATCC ® CRL-5807, lung bronchioloalveolar carcinoma; Calu-3, ATCC ® HTB-55, lung adenocarcinoma; A549, ATCC ® CCL-185, lung adenocarcinoma) and IMR-90 human lung fibroblast cell lines (ATCC ® CCL-186) were obtained from the American Type Culture Collection (ATCC, Rockville, MD, USA). IMR-90 and Calu-3 cells were cultured in Eagle’s minimal essential medium (EMEM), NCI-H358 cells in Roswell Park Memorial Institute (RPMI)-1640 medium, and A549 cells in F-12K medium supplemented with 10% fetal bovine serum (FBS, WelGENE Inc., Deagu, South Korea) and 100 U/mL penicillin-streptomycin (WelGENE Inc.) in a humidified incubator set at 37°C with 5% CO2. Subsequently, NCI-H358 and A549 cells were cultured in EMEM to match the medium used for IMR-90 cells. We performed cytotoxicity and cell viability assays as well as real-time cell monitoring for 120 hours to observed the effects of exposure to 50 mg/L chrysotile, 50 mg/L crocidolite, and 50 mg/L amosite on IMR-90 making IMR-90 being cytostatic, and decided to use 50mg/L as our experimental concentration for all types of asbestos [17 ]. The study was approved by the institutional review board of Yeouido St. Mary’s Hospital (Korea; approval number SC19ZNSI0015) and was in accordance with the relevant legislation.
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