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10 protocols using gaussia luciferase flash assay kit

1

Measuring Virus Infection and Replication

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A cell culture medium from cells at a 90% confluency were removed and replaced with VACV-WR or vLGluc diluted in EMEM supplemented with 2.5% FBS. Cells were infected for one h at 37 °C. The inoculum was then discarded, and cells were washed 2× times with PBS and maintained in a fresh medium. After 24 or 48 h, viruses from each treatment were collected by freezing/thawing 3 times, or the Gluc was directly measured in the culture medium using a Glomax luminometer (Promega, Madison, WI, USA) with a Gaussia luciferase flash assay kit (ThermoFisher, Waltham, MA, USA). Virus titers were determined by plaque assay in BS-C-1 cells with viruses serially diluted in EMEM-2.5% FBS.
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2

Magnetically Guided Gene Expression

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HEK293 Luc-LEF/TCF cells were plated onto six-well plates at a density of 1.5 × 106 cells per well. After 24 h of culture, the serum was withdrawn from the culture medium for 1 h, cells were incubated with 25 μg of MNP (approx. 1.3 × 103 MNP per cell) either with or without peptide conjugation. After 30 min of incubation, cells were washed with PBS to remove unbound MNPs, replaced with a fresh DMEM medium containing 2% FBS and 1% non-essential amino acid, and then put into the MFB for a set time period, with the frequency set at 1 Hz. Cells without the MNP addition and MFB exposure were employed as controls. The medium was collected at predetermined time points and analyzed using a Gaussia Luciferase Flash Assay Kit (ThermoScientific, Loughborough, UK) per the manufacturer’s instructions.
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3

Wnt Pathway Activation Assay

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UM206 (UM206_L) and UM206 (S-S) (referred to as UM206_C) were synthesized by Pepceuticals (Enderby, UK) according to the sequences shown in Figure 2A,B. The purity of each of the peptides was not less than 75%. HEK293 Luc-LEF/TCF cells were plated onto 96-well plates at a density of 80,000 cells per well. After an overnight culture, a fresh medium, inclusive of various concentrations of peptides at a 10−8–10−3 M level, was administered to the cells. The cells without peptide treatment were used as the control, and the cells receiving the 500 ng/mL rmWnt3a treatment were used as the positive control. The TCF/LEF signaling transduction was measured at 3 and 24 h post-treatment by assaying the luciferase activity using a Gaussia Luciferase Flash Assay Kit (ThermoScientific, Wilmington, DE, USA) according to the manufacturer’s protocol. The luminescence was detected using a Synergy 2 (Biotek, Potton, UK) spectrometer.
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4

Gaussia Luciferase Assay Protocol

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Luciferase activity was revealed by the Gaussia Luciferase Flash Assay Kit (Thermo Fisher Scientific, USA). Luciferase activity, as relative luminescence units (RLU), was measured on a Glomax 20/20 luminometer (Promega, USA) by mixing 10 µL of medium or cell lysate with 50 µL of coelenterazine diluted in the provided assay buffer, as indicated by manufacturer’s instructions. Media and cell lysates, prepared according to the manufacturer’s instructions with the provided lysis buffer, were evaluated after collection at the tested time points (24, 36 and 48 hours) after transfection. Full details on the luciferase-based system as well as its optimization are provided in the Online Supplementary Methods and Online Supplementary Figures S2 and S3.
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5

Exosomal Gaussia Luciferase Assay

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The exosome fraction was prepared as described earlier in the Exosome Isolation section. The Gaussia luciferase activity in the exosome was measured by using the Gaussia Luciferase Flash Assay Kit (Thermo Fisher Scientific) according to the protocol supplied by the manufacturer.
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6

Gaussia Luciferase Assay for Short and Long-term Treatments

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For short-term treatments, 293T cells were transfected with pCMV-Gaussia Luc Vector (ThermoFisher Scientific, 16147) as described above. After 18 h, medium was removed and replaced with fresh medium containing 6-TG, BFA, or DMSO. After 6 h, medium was removed, debris was cleared by centrifuging samples at 5,000 × g for 5 min, then samples were stored at -80°C until measuring Gaussia luciferase activity using the Gaussia Luciferase Flash Assay Kit (ThermoFisher Scientific, 16158) as per the manufacturer’s directions on a FLUOstar Omega microplate reader (BMG Labtech). For long-term treatments, 293T cells were co-transfected with pCMV-Gaussia Luc and pLJM1-Luc2 and treated 6 h post transfection. After 24 h, supernatants were harvested as described above. Cell monolayers were lysed in Reporter Lysis Buffer (Promega) as described above. To measure both Luciferase and Gaussia luciferase activity in samples, we used the Dual-Luciferase Reporter Assay System (Promega, E1910), which although designed for firefly and Renilla luciferase, can be readily adapted for firefly and Gaussia luciferase as both Gaussia and Renilla luciferase both use coelenterazine as a substrate.
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7

Promoter Reporter Assays in HEK293FT and DC2.4 Cells

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HEK293FT or DC2.4 (SCC142, Millipore) cells were cultured in DMEM supplied with 10% FBS (GIBCO) and penicillin–streptomycin (Thermo Fisher Scientific). VCAM1, Il1b, Tnf, Il23, Ppara, Rara, IFNG, RORC and IL12RB promoter reporter plasmids expressing gaussia luciferase were acquired from GeneCopoeia; pGud-Luc has been described previously91 (link),92 (link). Reporters were transfected with Lipofectamine 2000 (11668019, Thermo Fisher Scientific). To evaluate AHR promoter activity, cells were stimulated with vehicle, propyzamide (10 μM), FICZ (0.5 μM) or a combination of propyzamide and FICZ. To evaluate VCAM1 promoter activity, cells were stimulated with vehicle or propyzamide for 2 more days before medium collection. CEBPB plasmid (15738, Addgene) or pGL4.54[luc2/TK] vector (E506A, Promega) were co-transfected to evaluate C/EBPβ binding to the Il1b, Tnf, Il23, RORC, IL12RB1 or IFNG promoters. Luciferase activity was evaluated using the Gaussia Luciferase Flash Assay Kit (16159, Thermo Fisher Scientific).
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8

Hypoxia-Inducible Factor 1-Alpha Regulation

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A total of 4 × 106 BMDCs from FVB.129S6-Gt(ROSA)26Sortm2(HIF1A/luc)Kael/J mice (006206, The Jackson Laboratory) were stimulated with LPS or LPS + L-LA (10 mM) for 6 h. Next, the luciferase activity was quantified using the Dual-Luciferase Reporter Assay System (Promega, E1910) according to the manufacturer’s protocol.
In another set of experiments, HepG2 (ATCC HB-8065) or DC2.4 (SCC142, Millipore) cells were cultured in DMEM supplied with 10% FBS (Gibco) and penicillin–streptomycin (Thermo Fisher Scientific). Ndufa4l2- and Hif1a-promoter reporter plasmids expressing Gaussia luciferase were acquired from GeneCopoeia. To evaluate Ndufa4l2 promoter activity cells were stimulated with vehicle, L-LA (10 mM), LPS (100 ng ml−1) or the combination of L-LA and LPS. For overexpression assays, HIF1A plasmid (OHu27176, GenScript), Ndufa4l2 plasmid (EX-J0135-M02, GeneCopoeia) or empty control vector (GeneCopoeia) were used. All plasmids were transfected using lipofectamine 2000 (11668019, Thermo Fisher Scientific) following the manufacturer’s instructions. Luciferase activity was evaluated with the Gaussia Luciferase Flash Assay Kit (16159, Thermo Fisher Scientific).
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9

Stable 3T3-L1 PPARγ and STAT3 Reporter Cells

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Stable 3T3-L1 PPARγ and STAT3 reporter cell lines were generated as follows. Briefly, consensus binding sites of PPARγ and STAT3 (AGGACAAAGGTCA for PPARγ and TTTCCGGGAA for STAT3) were identified using the TRANSFAC public database. The response element (RE) oligonucleotides, containing three consensus binding sequences, were cloned into the GLuc-DRE2-viral vector, wherein GLuc is regulated by a minimal promoter [14 (link)]. The expression of GLuc is induced when a target transcription factor binds to its consensus binding site. Thereafter, stable 3T3-L1 PPARγ and STAT3 reporter cell lines were generated through lentiviral transduction.
To profile the activation of PPARγ and STAT3, the reporter cells were differentiated in 12-well plates as described above. The supernatant was harvested on day 1, day 3, and day 5 post-differentiation induction and used to measure GLuc activity. GLuc activity (Relative Light Units; RLU) was assessed using the Gaussia Luciferase Flash Assay Kit (Thermo Fisher Scientific, Waltham, MA, USA) and TriStar2 LB 942 Modular Multimode Microplate Reader (Berthold technologies, Bad Wildbad, Germany) in accordance with the manufacturers’ instructions. After normalization with cell density, relative fold changes were determined at each time point.
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10

Viral Infection Assay Using Luciferase

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All compounds were acoustically transferred to the assay plates using ECHO555 (Beckman Inc. Sykesville, MD, USA) at a final desired concentration. All plates included DMSO and cytosine arabinoside (AraC) controls. Cells were trypsinized, resuspended in a fresh medium, and counted before mixing with diluted reporter viruses to reach the desired multiplicity of infection (MOI). The cell–virus mixture was then plated in 96-well plates pre-coated with library drugs along with positive (AraC) and negative (DMSO) controls. The plating procedure was carried out using an automated microplate dispenser, and 50 µL of the virus–cell mixture (~5000 cells) were dispensed into each well. The plates were then incubated at 37 °C with 5% CO2. After 24 h, luciferase activities were measured using a Glomax luminometer with a Gaussia luciferase flash assay kit (Thermo Fisher 16158).
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