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5 protocols using ab8425

1

Western Blot Analysis of Liver Proteins

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Livers were homogenized in RIPA buffer using a FastPrep-24 homogenizer and incubated on ice for 30 min. Samples were centrifuged at 17,000 x g for 15 min at 4 oC. Supernatants were resuspended in 2X SDS loading buffer and 25 or 100 µg of total protein was run on a 4-15% SDS-PAGE gel before being transferred to nitrocellulose membrane. Membranes were blocked for 1 hr in 10% milk TBS-T solution at room temperature before overnight incubation in anti-CA3 (Abcam, Cambridge, MA, catalog# ab181358, 1:500-1000) and anti-GAPDH (Abcam, catalog# ab8425, 1:5000) antibody in TBS-T at 4 oC. After washing, samples were incubated in goat anti-rabbit HRP secondary antibody (Thermo-Fisher, catalog # 656120, 1:2000) in 5% milk TBS-T solution for 3 hr before washing and visualization with ECL (Thermo-Fisher).
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2

Western Blot Analysis of TGFBR1, CCNE2, and GAPDH

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For western blot analysis, RIPA buffer containing protease inhibitors and phosphatase inhibitors (Roche) was used to prepare whole-cell lysates. Equal amounts of proteins were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to PVDF membranes (Millipore). After blocking with 5% bovine serum albumin (BSA), the membranes were probed with anti-TGFBR1, CCNE2, and anti-GAPDH (ab31013, ab32103, and ab8425; Abcam, Cambridge, UK), followed by incubation with a horseradish peroxidase-conjugated secondary antibody goat-anti-mouse IgG (1:2000) and goat-anti-rabbit IgG (1:3000). Proteins were visualized using Image Reader LAS-4000 (Fujifilm) and analyzed using the Multi Gauge V3.2 software.
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3

Protein Expression Analysis in Ischemic Mouse Brains

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Total protein of the cortex of the ischemia side in mice brains or cultured cells was extracted using a RIPA lysis buffer (Beyotime Institute of Biotechnology, China). Approximately equal amounts of protein were separated by 12% SDS-PAGE and transferred onto PVDF membranes. After blocking in 5% skim milk, the membranes were incubated with primary antibodies, including FGF19 (1:500, ab225942, Abcam), GSK-3β (1:500, ab93926, Abcam), phosphorylated-GSK-3β (1:500, ab75814, Abcam), Nrf2 (1:500, ab62352, Abcam), Lamin B2 (1:1000, ab8983, Abcam) and GAPDH (1:2000, ab8425, Abcam), overnight at 4 °C. Afterwards, the membranes were incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies (1:3000, ab205718, Abcam) at room temperature for 1 h. The protein bands were visualized using an enhanced chemiluminescent (ECL) kit.
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Western Blot Analysis of FOXO3 Protein

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For western blot analyses, RIPA buffer containing protease inhibitors and phosphatase inhibitors (Roche) was used to prepare whole-cell lysates. Briefly, equal amounts of lysate were separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to PVDF membranes (Millipore). After blocking the membranes with 5% bovine serum albumin (BSA), they were probed with anti-FOXO3 and anti-GAPDH (ab12162, ab8425, Abcam, Cambridge, UK), followed by incubation with the horseradish peroxidase–conjugated secondary antibodies goat-anti-mouse IgG (1:2000) and goat-anti-rabbit IgG (1:3000). Proteins were visualized by Image Reader LAS-4000 (Fujifilm) and analyzed by Multi Gauge V3.2 software.
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5

Quantification of DNA Damage Response in Mouse Liver

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Snap-frozen livers from mice were incubated in RIPA buffer (Thermo-Fisher) on ice for 30 min after being homogenized with a FastPrep-24 homogenizer. Samples were centrifuged at 17,000g for 15 min at 4 °C. Supernatant was resuspended in 2× SDS loading buffer and 50 μg of total protein run on a 4–15% SDS–PAGE gel (Bio-Rad) before being transferred to nitrocellulose membrane. Membranes were blocked for 1 h in 10% milk TBS-T solution at room temperature before incubation in anti-ERCC1 (Santa Cruz Biotechnology, sc-17089), anti-γH2AX (Novus Biologicals, NB100-384, 1:2,000) and anti-GAPDH (Abcam, ab8425, 1:5,000) antibody at 4 °C overnight. After washing, samples were incubated in either horse anti-mouse HRP (Cell Signaling Technology, 7076S) or goat anti-rabbit HRP secondary antibody (Thermo-Fisher, 656120, 1:2,000) in 5% milk TBS-T solution for 3 h before washing and visualization with ECL (Thermo-Fisher).
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