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Oligofectamine 2000

Manufactured by Thermo Fisher Scientific
Sourced in United States

Oligofectamine 2000 is a transfection reagent used for the efficient delivery of nucleic acids, such as plasmids, siRNA, and oligonucleotides, into a variety of mammalian cell lines. It is designed to facilitate the uptake of these molecules by the target cells, enabling effective gene expression or gene silencing experiments.

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27 protocols using oligofectamine 2000

1

U2OS Cell Transfection with RNAi Kits

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U2OS cells were transfected using TriFECTa® RNAi Kits (Integrated DNA Technologies) and Oligofectamine 2000 (Thermo Fisher Scientific) according to the manufacturer’s protocol.
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2

Knockdown of PKC Isoforms in Caco-2Bbe1 Cells

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PKCα, PKCδ and scrambled siRNAs were obtained from Santa Cruz (Dallas, TX) and transfected using Oligofectamine 2000 (Thermo Fisher), in accordance with manufacturer’s protocol. Briefly, Caco-2Bbe1 cells were seeded onto 24-well plates (~5 × 104 cells/well) and transfected with siRNA oligomers complex dissolved in OPTI-MEM (Life Technologies) at 10, 20 and 50 pmoles for 48 h prior to experiments. Control cells were treated with scrambled siRNA using equal amounts of OPTI-MEM and Oligofectamine reagents. Verification of siRNA knockdown efficiency was performed by western blotting for PKCα and PKCδ.
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3

Knockdown of RRM1, RRM2, or RLUC

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esiRNAs for RRM1, RRM2, or RLUC (control) were purchased from Sigma Aldrich and transfected at a concentration of 3000 ng esiRNA per 10 cm plate using Oligofectamine 2000 (ThermoFisher Scientific). After transfection, cells were incubated for 72 hrs. at 37 °C and subsequently harvested for protein and cell viability and knockdown was analyzed by immunoblot.
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4

HeLa Cell Culture and Transfection

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HeLa cells were grown in Eagle's MEM plus 10% fetal calf serum, 2 mM l-glutamine, 100 U·mL−1 penicillin, 100 µg·mL−1 streptomycin and 1% nonessential amino acids (Sigma, St Louis, MI, USA), and incubated in humidified air containing 5% CO2 at 37°C. At 80% confluence, cells were transfected with different DNA constructs using Oligofectamine 2000 (ThermoFisher, Waltham, MA, USA) as a transfection reagent and incubated for 24 h before harvesting.
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5

Upregulation of miR-125b in GBC cells

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Human miR-125b mimics oligonucleotides (miR-125bmimic) and control non-specific miRNA mimics oligonucleotides (C-miR) were purchased from RiboBio (Guangzhou, China). GBC cell lines, TYGBK-8 and G-415 cells, were transfected with C-miR or miR-125b-mimic with Oligofectamine 2000 (Thermo Fisher Scientific, USA) for 48 h. Forty-eight hours after transfection, endogenous miR-125b expression was examined by qRT-PCR to confirm the upregulation efficiency.
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6

Transfection Assay for RNASEH1 Cleavage

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HEK293 and HeLa cells (from Life Technologies) and MHT cells (50 (link)) were grown in DMEM medium supplemented with 10% FBS at 37°C in an incubator with 5% or 8% CO2. One day before transfection, cells were seeded at ∼60% confluency and incubated overnight. Transfection of ASOs was performed using Oligofectamine 2000 or RNAiMax (Life Technologies). For the RNASEH1 cleavage activity assay, cells transfected with ASO761919 were reseeded at ∼60% confluency, allowed to grow for 14 h, and then transfected again with an ASO targeting Malat1 (ASO395254). RNA was harvested 4 h later. Transfection with siRNAs (3–5 nM final concentration) was performed using RNAiMax (Life Technologies). At 4 h or 24 h after siRNA transfection, cells were washed and transfected with ASOs. For the attenuation study using complementary oligonucleotide (Figure 1), HEK293 cells were co-transfected with ASO761919 and ASO927728 or with ASO761919 and ASO759704.
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7

miRNA and siRNA Transfection of Fibroblasts

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Fibroblasts (5 × 105) were seeded in T25 flasks and incubated overnight. These cells were either transfected with non-targeting miRNA negative control and specific synthetic miRNA precursors (Life Technologies) or with PTEN siRNA and silencer Cy3 labelled negative control 1 siRNA (Life technologies) at a final con-centration of 50 nM using Oligofectamine 2000 (Life Technologies) in reduced serum media. Total RNA and protein were extracted at 72 h post-transfection.
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8

Mcl-1 siRNA Transfections with Oligofectamine

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Transfections with non-targeting or Mcl-1 specific siRNAs were performed with Oligofectamine® 2000 (Invitrogen, Carlsbad, CA) or Oligofectamine as described in31 (link),32 (link).
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9

Efficient siRNA Knockdown in Cell Lines

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siRNA Smart pools for TC10, p190RhoGAP, p120RasGAP were purchased from Dharmacon/GE Healthcare (siGenome). Transfections were performed with Oligofectamine 2000 (Invitrogen) for MTLn3 cells and via electroporation, using Amaxa cell line nucleofector kit V (VACA 1003, Lonza, Basel, Switzerland), for MDA-MB-231 cells. To monitor the transfection efficiency, siGLO-Red (Dharmacon) was co-transfected, according to the manufacturer’s protocols. Knockdown was assessed, and subsequent assays were performed at 48 h (MTLn3) or 72 h (MDA-MB-231) after transfection.
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10

Evaluating TIMP3 3'UTR-miR-181b Interaction

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Firefly luciferase activity measurement was obtained at room temperature using Luc-Pair miR Luciferase Assay Kit (GeneCopoeia) and a single tube luminometer (Model TD 20/20 Turner Designs, Sunnyvale, CA). Dual-luciferase reporter constructs containing 3′UTR of TIMP3 with miR-181b binding sites (GeneCopoeia) were transfected into HAVECs using a Nucleofection Kit (Lonza). HAVECs were transfected first with wild-type TIMP3 gene 3′-UTR using HUVEC NucleofectorKit (Lonza) and were allowed to recover for 24 h. Second transfection was performed using increasing concentrations of miR-181b mimics or mimic control with Oligofectamine 2000 (Invitrogen). Firefly and Renilla luciferase activities were measured using a Luc-PairmiR Luciferase Assay (GeneCopoeia) as per manufacturer’s recommendations.
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