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3 protocols using t bet pe cy7

1

Surface and Intracellular Staining of PBMCs

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Rested PBMCs from patients (n=25) and healthy controls were washed with PBS and surface stained for 30 minutes at 4°C. Monoclonal antibodies used for surface staining were LIVE/DEAD Aqua fixable dead cell stain (Life technologies), CD3-PerCP-Cy5.5 (clone HIT3a, BioLegend), and CD56-BV605 (clone NCAM16.2, BD Biosciences). Cells were then washed and incubated with BD Cytofix Fixation buffer for 20 minutes at 4°C. Once fixed, the cells were permeabilized in 1X Perm/Wash buffer (BD) for 20 minutes at room temperature and stained with T-bet-PE-Cy7 (BioLegend) and Eomes-PE (eBioscience). The cells were then washed and resuspended in 1X Perm/Wash buffer prior to analysis.
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2

Multiparameter Flow Cytometry Analysis

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Cell surface and intracellular molecular expressions were evaluated by flow cytometry using CytoFLEX (Beckman Coulter, U.S.A.). Fluorescein-conjugated mouse anti-human antibodies were used, including CD3-FITC/PE, CD4-FITC/APC, IFN-γ-PE-CY7/PE, TNF-α-PE-CY7, IL-4-PE/PE-CY7/BV421, IL-5-BV421, IL-13-BV421, T-bet-PE-CY7 and GATA-3-BV421 (Biolegend, UK). Anti-human antibodies NR2F2(Abcam, UK) were binding with fluorescent agent APC (Biolegend, UK) according to the manufacturer’s introduction. For cell-surface staining, single-cell suspensions were stained on ice for 30 min in PBS with 1% fetal bovine serum (FBS). For intracellular staining, cells were fixed and permeabilized using the Fix/Perm kit (Biolegend, UK). To detect intracellular cytokines, CD4+T cells were stimulated for 4 h with phorbol 12-myristate 13-acetate (PMA; 1 μg/mL; Sigma) and ionomycin (1 μg/mL; Sigma), and 4 h with GolgiStop (1 μL/mL; BD Biosciences) in a round-bottom 96-well plate. Thereafter, cells were harvested, stained for surface expression, and then fixed and permeabilized for intracellular staining. Flow cytometry data was analyzed using FlowJo software (BD, UK) and CytoExpert software (Beckman Coulter, U.S.A.).
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3

Antibody-mediated Immune Profiling

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Therapeutic anti-CTLA-4 (clone 9H10) antibody and isotype control antibody was purchased from BioXcell (cat: BE0131 and BE0087). Antibodies used for flow cytometry were purchased from the following sources (dilutions are indicated in parentheses): eBioscience (CD45.2 Alexa Fluor 700, cat: 56-0454 (1:200), CD3 PE-Cy7, cat: 25-0031 (1:200), CD4 ef450, cat: 48-0041 (1:200), CD4 APC-efluor780, cat: 47-0041 (1:400), CD8 PerCP-efluor710, cat: 46-0083 (1:200), CD11b APC-efluor 780, cat: 47-0112 (1:600), ICOS PE, cat: 12-5985 (1:200), ICOSL PE, cat: 12-5985 (1:200), CTLA-4 PE, cat: 12-1522 (1:200), NK1.1 PE, cat: 12-5941 (1:200), IFNγ PE, cat: 12-7311 (1:200), FoxP3 Alexa Fluor 700, cat: 56-5773 (1:100), FoxP3 APC, cat: 17-5773 (1:200), GATA-3 PE, cat: 12-9966 (1:100), RORγT PerCP-efluor710, cat: 46-6981 (1:100), Tbet PE-Cy7, cat: 25-5825 (1:100), EOMES efluor 450, cat: 48-4875 (1:100), PD-1 PE-Cy7, cat: 25-9985, (1:200)), Biolegend (CD3 BV570, cat: 100225 (1:100), CD11b BV570, cat: 101233 (1:50), Bcl-6 Alexa 594, cat: 648308 (1:50)), Invitrogen (Granzyme B PE-Texas Red, cat: GRB17 (1:125), Granzyme B APC, cat: GRB05 (1:125)) and BD Pharmingen (Ki-67-Alexa Fluor 488, cat: 561165 (1:50), CXCR5-biotin, cat: 551960 (1:100)).
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