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3 protocols using mouse anti turbogfp

1

Protein Immunoblotting and Immunostaining

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The following reagents were purchased from the indicated providers: dimethyl sulfoxide (DMSO; Sigma, D8418) and mifepristone (RU-486; Sigma, M8046). The following antibodies were used for immunoblotting: mouse anti-TurboGFP (Origene, TA150041), rabbit anti-TDP-43 (Proteintech, 10782-2-AP), rabbit anti-LC3 (MBL, PM036), mouse anti-Polyubiquitin (Enzo Life Science, BML-PW8805), mouse anti-Flag (Cell Signaling Technology, 2044), rabbit anti-HDAC6 (Santa Cruz Biotechnology, sc-11420), mouse anti-Lamin A/C (EMD Millipore, 05-714), HRP-conjugated anti-alpha-tubulin (Cell Signaling Technology, 9099), HRP-conjugated anti-rabbit IgG (Santa Cruz Biotechnology, sc-2004), HRP-conjugated mouse IgM (Abcam, ab97230), and HRP-conjugated mouse IgG (Santa Cruz Biotechnology, sc-2005). The following antibodies were used for immunocytochemistry (ICC): rabbit anti-cleaved caspase-3 (CC3) antibody (Cell Signaling Technology, 9664) and Alexa 594-conjugated anti-rabbit IgG (Jackson ImmunoResearch, 111-585-144). The following antibodies were used for immunohistochemistry: rat anti-ELAV (DSHB, RAT-ELAV-7), mouse anti-Polyubiquitin (Enzo Life Science, BML-PW8805), Alexa-488 conjugated rat IgG (Jackson ImmunoResearch, 112-545-167), and Alexa-594 conjugated mouse IgM (Jackson ImmunoResearch, 115-587-020).
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2

PLA Assay for Protein-Protein Interactions

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A standardized procedure for PLA was used (Jalili et al. 2018 (link)). Briefly, HEK293 cells were seeded on circular coverslips and transfected with specific plasmids for 72 h using a 3:1 ratio of PEI to pDNA. Cells were fixed with 4% paraformaldehyde for 10 min, followed by permeabilization and blocking (10% heat-inactivated goat serum, 1% Triton X-100) for 1 h. Cells were then probed with two specific primary antibodies raised in different species—mouse anti-TurboGFP (1:250; Origene TA150041)/rabbit anti-Flag (1:500; Sigma F7425)—overnight at 4°C. The cells were incubated with PLA probes for 1 h at 37°C, with ligase for 30 min at 37°C, and with polymerase for 100 min at 37°C, based on the manufacturer's protocols. Cells were stained with DAPI and then mounted with PermaFluor mounting medium (Thermo Scientific TA030FM). Images were captured on a Zeiss LSM 700 laser scanning confocal microscope.
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3

Surface Labeling of PRRT2 Constructs

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Cells transfected with the various PRRT2 constructs were live-labeled by diluting primary antibodies (rabbit anti-PRRT2, 1:200, Sigma-Aldrich; mouse anti-HA, 1:200, Invitrogen; mouse anti-turboGFP, 1:200, Origene; and mouse anti-GFP, 1:500, Millipore) in culture medium for 1 h at 37 °C in a 5% CO2 incubator to detect the surface epitopes, followed by incubation with Alexa Fluor 488 or 594 secondary antibodies for 1 h at 37 °C, and fixed. In the experiments of live-labeling with HA antibodies, after live incubation with Alexa Fluor 488 secondary antibodies, cells were fixed with 4% paraformaldehyde, permeabilized with 0.1% Triton X-100, and stained with anti-PRRT2 antibodies, followed by Alexa Fluor 594 secondary antibodies to label total PRRT2.
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