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36 protocols using jms 700 mstation

1

Synthesis and Characterization of Organometallic Complexes

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Fluorophenylthiols (HSRF), Pb(CH3COO)2, K[AuCl4], tetrahydrothiophene (tht), and 1,3-bis(diphenylphosphano) propane were purchased from Sigma-Aldrich and used without additional treatment. Solvents were obtained from JT Baker and used without previous treatment.
IR spectra were obtained using a Perkin-Elmer Spectrum 400 (PerkinElmer, Inc., Waltham, MA, USA) in the range of 4000 to 400 cm−1 using attenuated total reflectance (ATR-FTIR). Elemental analysis was performed with a Thermo Scientific Flash 200 (Thermo Fisher Scientific., Waltham, MA, USA) at 950 °C. NMR spectra were recorded on a 9.4 T Varian VNMRS spectrometer (Varian, Inc., Palo Alto, CA, USA) in CDCl3. Chemical shifts are reported in ppm relative to internal TMS δ = 0 ppm (1H, 13C) and to external references of CFCl3 (for 19F) and H3PO4 (for 31P) at 0 ppm. Positive-ion fast atom bombardment mass spectrometry (FAB+MS) spectra were measured on an MStation JMS-700 (JEOL, Ltd., Tokyo, Japan). Crystals were grown by slow (1 week) evaporation of solutions of the compounds in chloroform.
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2

Spectroscopic Characterization of Compounds

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Air and/or moisture sensitive reactions were performed under an atmosphere of Argon in flame-dried apparatus. When necessary, solvents were dried and purified using a Pure Solv™ solvent purification system (SPS). IR spectra were recorded using a type IIa diamond single reflection element on a Shimadzu FTIR-8400 instrument. The IR spectrum of the compound (solid or liquid) was obtained by analysis of a thin layer at ambient temperature. 1H and 13C-NMR spectra were recorded using either a Bruker 400 MHz or 500 MHz Spectrospin spectrometer at ambient temperature; 13C-NMR NMR spectra were recorded at 101 MHz or 126 MHz. Mass spectra were obtained by ionisation under EI, FAB, CI and ESI conditions on a Jeol MStation JMS-700 instrument. Elemental analyses were performed on an Exeter Analytical Elemental Analyser EA 440 by technical staff at the University of Glasgow. Melting points were recorded with an Electrothermal IA 9100 apparatus.
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3

Dioxin Exposure Assessment via Breast Milk

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The children’s perinatal dioxin exposure was estimated using the dioxin levels in their mothers’ breast milk collected a month after the birth of these children. Seventeen 2,3,7,8-substituted congeners of polychloro-dibenzodioxins (PCDDs) and polychloro-dibenzofurans (PCDFs) were measured using a high-resolution mass spectrometer (MStation-JMS700, JEOL, Tokyo, Japan), and the total toxic equivalents (TEQ) of PCDDs and PCDFs (TEQ-PCDD/Fs) were calculated by summing all of the values obtained by multiplying each congener concentration with reference to the WHO 2005 toxic equivalent factor [26 (link)]. The established method of analysis has been described previously in detail [27 (link)]. Because TCDD is the most toxic dioxin congener and specific for dioxin contamination originated from Agent Orange and TEQ-PCDD/Fs reflected the total toxic equivalent of all 17 PCDD/Fs, we selected these 2 indices as dioxin exposure markers in the present study.
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4

Perinatal Dioxin Exposure and Aggression

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The perinatal dioxin exposure of children was estimated using the dioxin levels in their mothers’ breast milk collected one month after giving birth, since a previous study reported significant correlations between dioxin levels in breast milk and those in cord blood [23 (link)]. Seventeen 2,3,7,8-substituted congeners of polychlorodibenzodioxins (PCDDs) and polychlorodibenzofurans (PCDFs), including 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD), were measured using a gas chromatograph (HP-6980; Hewlett-Packard, Palo Alto, CA, USA) equipped with a high-resolution mass spectrometer (high-resolution-gas chromatography/mass spectrometry; MStation-JMS700, JEOL, Tokyo, Japan). More details of dioxin analysis were reported in our previous study [24 (link)]. The calculations of TEQ-PCDDs/PCDFs were referenced from the WHO 2005 toxic equivalent factor [25 (link)].
Increased risks (odds ratios) for high C-SARP aggression subscale scores associated with an increase in TCDD exposure were analyzed after adjusting for confounding factors, including the education of mothers, family income, area, sex, and the child’s age at the survey, using binary logistic regression analysis.
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5

Detailed Characterization of Organic Compounds

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All commercially available materials from Sigma-Aldrich (Burlington, MA, USA), Daejung (Siheung, Korea), TCI (Tokyo, Japan), Chemieliva (Chongqing, China) and solvents were used without further purification. All small-scale screening reactions (≤10 mL of solvent) were performed in 50 mL round bottom flasks on a Radleys Carousel 6 Plus Reaction Station under an air atmosphere. HPLC was performed on a Hitachi LaChrom Elite HPLC system. 1H NMR (400 MHz) and 13C NMR (100 MHz) were measured on a Bruker Avance 400 spectrometer system. 1H NMR spectra chemical shifts were expressed in parts per million (ppm) downfield from tetramethylsilane, and coupling constants were reported in Hertz (Hz). Splitting patterns are indicated as follows: s, singlet; d, doublet; t, triplet; and q, quartet; m, multiplet. 13C NMR spectra were reported in ppm, referenced to deuterochloroform (77.16 ppm). Melting points were determined by DSC (Mettler Toledo). High resolution mass spectra (HRMS, JEOL MStation JMS-700) were obtained using an electron impact (EI) ionization technique (magnetic sector—electric sector double focusing mass analyzer) from the KBSI (Korea Basic Science Institute Daegu Center).
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6

Spectroscopic Characterization of Compounds

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IR spectra were recorded on a JASCO FT-IR 410 infrared spectrophotometer (JASCO Inc.: Easton, MD, USA). The NMR experiments were performed on a Varian Unity 600 or 500 instrument (Varian Inc.: Palo Alto, CA, USA). Deuterated solvent was used as references for the 1H and 13C NMR spectra. HREIMS and HRCIMS were performed on an MStation JMS-700 or a JMX-AX 500 spectrometer (JEOL Ltd.: Tokyo, Japan). TLC was carried out with silica gel 60 F254 and PR-18 F254 plates. HPLC was performed on a JASCO PU-1580 pump (JASCO Inc.: Easton, MD, USA) equipped with a JASCO UV-1575 detector (JASCO Inc.: Easton, MD, USA). All solvents used for extraction and isolation were of analytical grade.
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7

Purification and Characterization Techniques

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Column chromatography was carried out using silica gel 60 (0.040–0.063 mm) (230–400 mesh ASTM). Thin-layer chromatography (TLC) was performed on precoated aluminum sheets coated with silica gel F250 (Merck, Germany). Nuclear magnetic resonance (NMR) experiments were carried out on a Bruker AVIII (500 MHz) spectrophotometer using CDCl3 as the solvent and TMS as the internal standard. Mass spectral data were acquired on a JEOL MStation JMS-700 mass spectrometer.
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8

Spectroscopic Characterization of Organic Compounds

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Infrared absorbance spectra were collected with a Fourier transform infrared (FTIR) spectrometer (NICOLET 6700). Positive FAB-MS spectra were recorded on a JEOL MStation JMS700 mass spectrometer using m-nitrobenzyl alcohol as the matrix. 1H, gCOSY, and HSQC NMR experiments were performed with a Varian Mercury 400 MHz spectrometer. 13C experiments were performed with a Varian 400 MHz spectrometer equipped with a Varian OneNMR probe. Chemical shifts were referenced to the residual solvent peaks in CD3OD. Optical rotation was measured with a Jasco DIP 360 polarimeter fitted with a microcell (10 mm path length).
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9

Synthesis of Compounds 1-8

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The synthesis of compounds 18 is detailed in Supplementary Methods (NMR spectra in Supplementary Figs. 1118). All chemicals were purchased from Sigma Aldrich, Fluorochem, TCI organics or Cambridge Isotope Laboratories and used without further purification. Flash chromatography was carried out on a Reveleris X2 flash chromatography system. All NMR spectra were recorded at 25 ˚C. NMR spectra were measured on a Bruker Avance II 400 MHz, Avance III 400 MHz, Avance III 500 MHz or Avance III 600 MHz spectrometer. Chemical shifts are reported in ppm relative to the residual solvent peak. Chemical shifts (δ) are given in ppm and coupling constants (J) are quoted in hertz (Hz). Resonances are described as s (singlet), d (doublet), t (triplet), q (quartet) and m (multiplet). Electron impact mass spectrometry was carried out on a Jeol MStation JMS-700 high resolution mass spectrometer. Electrospray ionisation mass spectrometry was carried out on a Bruker microTOFq high resolution mass spectrometer (LTQ Orbitrap XL for compounds 7 and 8). Elemental analysis was measured with an Exeter CE-440 Elemental Analyser.
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10

Spectroscopic Characterization of Organic Compounds

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Optical rotation was measured using an auto digital polarimeter, and Fourier transform infrared (FT-IR) spectra were recorded using Nicolet 380 FT-IR spectrophotometer (Thermo Electron Corporation). Nuclear magnetic resonance (1H NMR and 13C NMR) spectra were obtained using Varian Gemini 300 (300, 75 MHz) and Bruker Avance 500 (500, 125 MHz) using tetramethylsilane as internal standard. Low-resolution mass spectrometry profiles were obtained using a JEOL the MStation JMS-700. Chiral high-performance liquid chromatography (HPLC) analysis was performed using a Jasco LC-1500 Series HPLC system. Toluene (CaH2), tetrahydrofuran (THF) (Na, benzophenone), and CH2Cl2 (CaH2) reaction solvents were purified before use. The reagents used in this study were obtained from Aldrich, Acros, Alfa, Sigma, Merck, Fluka, TCI, and Lancaster, and purified or dried using a known method when necessary. Merck’s silica gel 60 (230–400 mesh) was used as the stationary phase in column chromatography.
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