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14 protocols using metabolite standards

1

Metoprolol Tartrate Quantification Protocol

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Metoprolol tartrate was obtained from AstraZeneca Pharmaceutical Co., Ltd. (Jiangsu, China). Barium chloride was obtained from Maoye Chemical Reagent Co., Ltd. (Chongqing, China). LC grade acetonitrile was purchased from Merck (Merck, Darmstadt, Germany). Isopropanol, formic acid and metabolite standards were purchased from Sigma-Aldrich (Sigma-Aldrich, St Louis, MO, USA). Purified water (18.2 MΩ) was prepared from a Mill-Q purification system (Millipore Corp., MA, USA).
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2

Spiked Water Samples Analysis by HS-SPME

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Acetone (HPLC grade) and methanol (HPLC grade) were obtained from Caledon Laboratories (Georgetown, ON, Canada). Water samples spiked with metabolite standards (Sigma–Aldrich, Oakville, ON, Canada) were analyzed by HS-SPME to establish the system precision procedure and GCxGC, mass spectral and linear temperature-programmed retention index (RI) databases34 (link),66 (link). An automated SPME holder and 10 mL amber screw cap vials were purchased from Supelco (Oakville, ON, Canada).
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3

Metabolite Extraction and Analysis Protocol

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Methanol (MeOH), Methoxyamine hydrochloride (MeOX), N-Methyl-N-(trimethylsilyl) trifluoroacetamide (MSTFA), trimethylchlorosilane (TMCS), and pyridine anhydrous were purchased from Sigma-Aldrich (Merck, Darmstadt, Germany). Internal standards 4-phenylbutyric, myristic acid-d27, and injection standard N-pentadecane were also obtained from Sigma-Aldrich (Merck, Darmstadt, Germany). Acetonitrile, Methyl-tert-butyl-ester (MTBE), and ammonium formate were obtained from CHEM-LAB NV (Zedelgem, Belgium). Deionized water was obtained from a Milli-Q ultra-pure-grade water system (Millipore, Bedford, MA, USA). LC-MS grade Acetonitrile and water used in the RP-HRMS/MS analysis were purchased from Romil Ltd., Cambridge, UK. Metabolite standards and formic acid used in the RP-LC-HRMS/MS analysis were purchased from Sigma-Aldrich (Gillingham, UK). Antibiotics, including metronidazole, vancomycin, kanamycin, gentamycin, colistin, and clindamycin, were purchased from Sigma–Aldrich (St. Louis, MO, USA).
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4

Metabolite Profiling via LC/MS

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Liquid chromatography/mass
spectrometry (LC/MS) grade acetonitrile, methanol, and water were
purchased from Millipore Sigma or Fisher Scientific. Ammonium bicarbonate,
ammonium hydroxide, and methylenediphosphonic (medronic) acid were
purchased from Millipore Sigma and used as eluent additives for LC/MS.
Metabolite standards were purchased from Sigma-Aldrich. Authentic
standards were weighed and dissolved in an appropriate solvent. A
10 μM standard mix was prepared in 50:50 acetonitrile/water
(v/v).
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5

Extraction and Identification of PSF

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Progesterone injection was purchased from Xianju Pharma (Taizhou, China). Pentobarbital was obtained from Xiya Reagent (Chengdu, China). Ultrapure water was produced by a Milli-Q plus water purification system (Milford, USA). N,O-bis(trimethylsilyl)-trifluoroacetamide-trimethylchlorosilane (BSTFA-TMCS) (99 : 1, v/v), urease, margaric acid, tropic acid, methoxylamine hydrochloride, pyridine, and metabolite standards were purchased from Sigma-Aldrich (St. Louis, USA). Absorbable gelatin sponge was purchased from Jinling Pharmaceutical Co. (Nanjing, China).
PSF was purchased from Tianxiang Co. (Yueyang, China) and identified by Professor Zhuxin Wang (Hunan university of Chinese medicine, Changsha, China). A voucher specimen (number HHBJC20140913) is deposited in the Key Laboratory of Hunan Province for Traditional Chinese Medicine in Obstetrics & Gynecology Research (the Maternal and Child Health Hospital of Hunan Province, Changsha, China). Referring to previous method [25 (link)], a 500 g of PSF was two times extracted with 5 L of hot ethanol for 1 hour and then the two extracts were filtrated. The filtrate was dried in vacuo to yield 63.9 g of the PSF extract.
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6

Liquid Chromatography-Mass Spectrometry Protocols

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Acetonitrile (ACN), methanol (MeOH), and water were of LC‐MS grade and ordered at Fisher Scientific (Vienna, Austria) or Sigma‐Aldrich (Vienna, Austria). ABC, ammonium formate, and ammonium hydroxide were purchased as the eluent additive for LC‐MS at Sigma‐Aldrich. Formic acid was also of LC‐MS grade and ordered at VWR International (Vienna, Austria). Sodium hydroxide (NaOH) was obtained from Sigma‐Aldrich (Vienna, Austria). Metabolite standards were purchased from Sigma‐Aldrich (Vienna, Austria) or Carbosynth (Berkshire, UK).
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7

Metabolite Profiling by GC-MS and LC-MS

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Metabolite standards, 3 N methanolic HCl, and toluene were purchased from Sigma. [U-13C]Glucose, [U-13C]glycine, and [U-13C]fumarate were obtained from Isotec. Potassium hydroxide (KOH), methylene chloride, ethoxyamine hydrochloride, and MSTFA+1% TMCS (N-methyl-N-trimethylsilytrifluoroacetamide plus 1% trimethylchlorosilane), solvents for GC-MS and LC-MS/MS, were purchased from Fisher Scientific. Gibberellins (GA4/GA7) and Murashige and Skoog basal salt were ordered from PhytoTechnology Laboratories.
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8

Metabolite Extraction and Derivatization Protocol

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Ultrapure water was produced using a Milli-Q Plus Water Purification System (EMD Millipore, Milford, MA, USA). Pentobarbital was purchased from Xiya Reagent Co., Ltd. (Chengdu, China). Progesterone injection was obtained from Zhejiang Xianju Pharmaceutical Co., Ltd. (Taizhou, China). N,O-Bis(trimethylsilyl)-trifluoro-acetamide-trimethylchlorosilane (BSTFA-TMCS) (99:1, v/v), urease, margaric acid, tropic acid, methoxylamine hydrochloride, pyridine and metabolite standards were purchased from Sigma-Aldrich (St. Louis, MO, USA). Absorbable gelatin sponge was purchased from Jinling Pharmaceutical Co., Ltd. (Nanjing, China).
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9

Metabolite Analysis by LC/MS

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Optima LC/MS grade acetonitrile and water were purchased from Thermo Fisher Scientific Inc. (Pittsburgh, PA, USA). Metabolite standards were obtained from Sigma-Aldrich (St. Louis, MO, USA). Cef was obtained from the MP Biomedicals (Santa Ana, CA, USA).
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10

Antibody Validation and Metabolite Analysis

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Optima LC grade acetonitrile was purchased from Merck (Merck, Darmstadt, Germany), formic acid was purchased from Fluka (Honeywell, Morris Plains, NJ, United States), and ultrapure water was prepared using a Milli-Q purification system (Merck Millipore, Darmstadt, Germany). Primary antibodies were purchased from Abcam (Cambridge, MA, United States): anti-ERα (ab3575), anti-ERβ (ab3576), anti-Ggt1 (ab109427), and anti-Anpep (CD13; ab108310). Metabolite standards were obtained from Sigma-Aldrich (Spruce St., St Louis, MO, United States).
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