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24 protocols using fluorescence spectrometer

1

Spectroscopic Analysis of EPS-605 Biomaterial

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Photographs of EPS-605 powder, film, and solutions were taken under white light or the irradiation of 302 nm in a Gel imager (Tanon-2500, Shanghai, China). The UV–vis absorption spectra of EPS-605 solutions were obtained with a Shimadzu UV-2600 spectrophotometer. The fluorescence intensities of the samples at different concentrations (0, 0.05, 0.1, 0.2, 0.4, 0.8, 1.0, 2.0, and 5.0 mg/mL) were then measured on a fluorescence spectrometer (PerkinElmer, Waltham, MA, USA). Fluorescent lifetimes (τ) of different EPS-605 materials were measured on an ultrafast time-resolved fluorescence lifetime spectrometer (Life Spec II, Edinburgh Instruments, Livingston, UK). Quantum yields (Φ) were measured on a PL quantum yield measurement system (Hamamatsu Photonics, C9920-02G, Hamamatsu, Japan) with an excitation wavelength (λex) of 320 nm.
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2

Fluorescence Analysis of LC Films

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Fluorescence analysis of the LC films was measured by using a Fluorescence Spectrometer (PerkinElmer Inc., Waltham, MA, USA, Model PerkinElmer LS 55 Fluorescence Spectrometer). The excitation wavelength was set at 380 nm, and the fluorescence emission spectrum was scanned from 400 to 600 nm with a scan rate of 50 nm s−1. The LC films were cut into a circle (~2 cm diameter) and placed in the solid compartment of the Fluorescence Spectrometer. Four v-shaped lines were cut (~1.40 cm to each line) into the films so as to simulate a puncture or tear, as illustrated in Figure 3. The cuts in the NRL film are clearly visible when examined under UV light (380 nm) and this is also evident in the corresponding fluorescence emission spectra results (see Section 3.2 and supporting information, Figures S1–S10).
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3

Analyzing Drug-Carrier Interactions

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Fluorescence spectroscopy helps in understanding the residues that are involved in the drug-carrier interaction. The scanning was performed using Perkin Elmer fluorescence spectrometer (Perkin Elmer, India). The excitation wavelength was set as 293 and 280 nm to selectively excite tryptophan and tyrosine residues, and the emission was monitored in the range of 310–600 nm with the fixed slit width of 5 nm.
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4

Pharmacokinetics of CRLX101 in Mice

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All procedures were performed according to the Guide for the Care and Use of the Laboratory Animals published by the US National Institutes of Health (NIH Publication no. 85-23, revised 1996) and approved by the Institutional Animal Care and Use Committee of Taipei Medical University (Taipei, Taiwan). Male ICR mice were purchased from the Animal Center of the College of Medicine, National Taiwan University (Taipei, Taiwan). Animals were intravenously injected with a single dose of 10 mg/kg CRLX101 following a previous method [29 (link)]. Previous studies have shown the safeties of the empty CD-PEG nanoparticles at a dosage up to 240 mg/kg in mice [43 , 44 (link)]. Mice were sacrificed and blood was collected at 0.5, 1, 3, 12, and 24 hours post-dose and plasma was separated from the blood. Acetonitrile was added to the plasma, and the mixture was centrifuged at 10000 rpm for 10 min to obtain the supernatant. Animals were sacrificed after perfusion. Brain tissues were homogenized and extracted with acetonitrile. To determine the CPT concentration, the fluorescence of CPT in the supernatant from brain tissues and plasma and standard CRLX101 were measured at 370 nm for excitation and 440 nm for emission using a fluorescence spectrometer (PerkinElmer). Concentrations were calculated with a standard curve.
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5

Characterization of Nanoparticles via Spectroscopy and Microscopy

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The UV-visible (vis) spectra and fluorescence spectra were obtained using a UV–Vis spectrometer (NanoDrop, Wilmington, DE, USA) and a fluorescence spectrometer (PerkinElmer, Waltham, MA, USA), respectively. Transmission electron microscopy (TEM) observation was performed on a JEM-2100HR transmission electron microscopy (JEOL, Akishima-shi, Japan) operated at 200 kV. Fourier transform infrared (FTIR) spectra were collected using a Tensor 27 FTIR spectrometer (Bruker, Karlsruhe, Germany) in the range 400 to 4,000 cm−1.
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6

Homogenization and Analysis of Samples

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An IKA Ultra-Turrax T25 (Staufen im Breisgau, Germany) realized a coarse homogenization of the samples in the extraction solvents. An Hielscher UP200St (Teltow, Germany) was employed for the direct UAE. An UV-Vis Agilent 8453 (Waldbronn, Germany) allowed the determinations of the TPC and RSA, whereas a 55LS Perkin Elmer Fluorescence Spectrometer (Waltham, MA, USA) was employed for the Oxygen Radical Absorbing Capacity (ORAC) determination.
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7

Ethidium Bromide Uptake Monitoring

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Ethidium bromide uptake was monitored as described earlier (43 (link)). MabWt, MabΔembC, and MabΔCMab were grown to an OD600 of 0.6–1.0. Bacteria were collected by centrifugation and resuspended in uptake buffer (PBS, 0.05% Tween 80, pH 7.0) to an OD600 of 0.5, followed by the addition of 25 mM glucose for energization. Ethidium bromide (1 μg/mL) was added, followed by real-time measurement in a fluorescence spectrometer (PerkinElmer) with excitation and emission wavelengths set at 520 and 595 nm, respectively. Results were normalized against fluorescence of ethidium bromide and are depicted relative to the highest fluorescence measured. The experiment was performed in triplicate and repeated three times.
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8

Quantifying Nitric Oxide in Potato Leaves

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Nitric oxide generation was quantitatively measured using DAF-2DA (Calbiochem). Potato leaf samples (0.1 g) were incubated in the dark for 1 h at 25 °C in a mixture containing 10 μM DAF-2DA in 10 mM Tris–HCl buffer (pH 7.2). After incubation, the probes were transferred into 24-well plates (1 mL per well). Fluorescence in the reaction was measured using a spectrofluorometer (Fluorescence Spectrometer Perkin Elmer LS50B, United Kingdom) at 495 nm excitation and 515 nm emission filters. Fluorescence was expressed as arbitrary fluorescence units.
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9

Quantifying Protein Permeability via Evans Blue

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Protein permeability was quantified by Evans blue, which binds to albumin. Mice (58/condition) were injected with 2% Evans blue in sterile saline, 4 ml/kg i.p. Three hours later, under isoflurane anesthesia, they were perfused with 50 ml PBS through the left ventricle to remove intravascular dye, and were euthanized by cervical dislocation. Striata were dissected free and weighed; Evans blue extraction and assay followed the method of Uyama et al. (Uyama et al., 1988 (link)). Tissue was homogenized in 200 μl 50% trichloracetic acid. After debris removal by centrifugation, the supernatant was collected and diluted 1:3 in 100% ethanol. Evans blue fluorescence (ex: 620 nm, em: 680 nm) was then measured using a Perkin Elmer fluorescence spectrometer. In order to quantify leakage of lower molecular weight molecules, additional mice (47/condition) were injected with 2% fluorescein isothiocyanate (FITC)-dextran (MW 3–5 kDa, 4 mg/kg, Sigma-Aldrich) rather than Evans blue. Five minutes later, mice were euthanized and striata were removed, homogenized in PBS, and centrifuged. The supernatant fluorescence (ex: 490 nm, em: 520 nm) was then measured. Mean fluorescence intensity (MFI) was normalized to that in vehicle-treated controls injected with collagenase (= 100).
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10

Fluorescence Emission Spectra of Proteins

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The fluorescence
emission spectrum was recorded on a LS55 (PerkinElmer) Fluorescence
Spectrometer having a 20 kW continuous powered high-pressure Xe lamp
as the excitation source and an R928 photomultiplier as the photodetector.
The fluorescence spectrum was recorded at an excitation wavelength
of 295 nm, which excites Trp residues only. The maximum fluorescence
emission was recorded in the wavelength range of 300–500 nm
for BSA and 290–500 nm for HSA. Excitation and emission bandwidths
were all set at 5 nm. A 10 μM protein solution prepared in tris-HCl
buffer of pH 7.4 and with varying concentrations of copper sulfate
pentahydrate was used to record the emission spectrum of both proteins
at 298 K.24 (link)
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