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Amphotericin b

Manufactured by Caisson
Sourced in United States

Amphotericin B is a polyene antifungal medication used to treat serious fungal infections. It is a complex organic compound produced by the bacterium Streptomyces nodosus. Amphotericin B acts by binding to the fungal cell membrane component ergosterol, leading to the formation of pores and cell death.

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8 protocols using amphotericin b

1

Expansion and Maintenance of Breast Cancer Cell Lines

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The MCF-7, HCC1937, MDA-MB-231, MDA-MB-468, MDA-MB-453, and SK-BR-3 cell lines were acquired from American Type Culture Collection (Virginia, USA). The MDA-MB-468 with STAT3 overexpression cell line was generously provided by Dr. Liu CY, working in Division of Hematology and Oncology, Department of Medicine, Taipei Veterans General Hospital (Taipei, Taiwan). All cell lines were immediately expanded and frozen down immediately after acquiring. All cell lines could be restarted every 3 months from a frozen vial of the same batch of cells. Cells except for MDA-MB-468 with STAT3 overexpression were maintained as described culture medium by ATCC; MDA-MB-468 with STAT3 overexpression cells was maintained in L-15 medium with G418 700 μg/mL. All media were supplemented with 10% FBS (Caisson, USA), 100 units/mL penicillin, 100 mg/mL streptomycin, and 25 mg/mL amphotericin B (Caisson, USA). All human breast cancer cell lines were incubated in a humidified incubator at 37°C in an atmosphere of 5% CO2 in air.
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2

Optimized Cell Culture Conditions

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Cell culture-grade chemicals were used in this study. Low glucose Dulbecco’s Modified Eagle’s Medium (LG-DMEM) and FBS were acquired from Bio West, Nuaillé, France. Penicillin–streptomycin, Amphotericin-B, and trypsin-EDTA (0.5% and 5.3 mM w/v, respectively) were obtained from Caisson, Smithfield, UT, USA. Minimum essential medium-alpha (α-MEM) was purchased from Gibco, Carlsbad, CA, USA, and Ex-Cyte from Millipore, Billerica, MA, USA. Insulin (3.5 mg [100 IU]/mL) was obtained from Novo Nordisk, Søborg, Denmark. MTT dye, collagenase type I, and TRIZOL (TriQuick, Catalogue #R1100) reagent were obtained from Solarbio, Fengtai, China. Dimethyl sulfoxide (DMSO), formalin, Triton X–100, isobutylmethylxanthine (IBMX), Dulbecco phosphate buffer saline (DPBS−/−; without Ca2+ and Mg2+), and Alizarin Red S stain (ARS) were procured from Sigma-Aldrich, Taufkirchen, Germany. The antifade mounting media was obtained from Vecta Shield, St. Neots, UK. The cDNA synthesis kit (Catalogue # cDSK01-100) was purchased from Vivantis Technologies, Selangor, Malaysia. SYBR green master mix and Oil red O (ORO) were obtained from Thermo Scientific, Chino, CA, USA. T-25, and T-75 cell culture flasks, serological pipettes, 6-well, 24-well, and 48-well cell culture plates, and cell strainers were received from Corning, NY, USA.
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3

Cell Culture Protocols for Cancer Research

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The human epithelioid cervix carcinoma cell line (HeLa), human ductal breast epithelial tumor cell line (T47D), Michigan Cancer Foundation-7 cell line (MCF-7), human colon carcinoma cell line (WIDR), hepatoblastoma-derived cell line (HepG2), and Vero cell line (derived from kidney of African green monkey) were purchased from ATCC by the Faculty of Medicine Gadjah Mada University. The cell lines were cultured in Dulbecco’s Modified Eagle Medium (DMEM, Gibco), except for Vero cell line, which was cultured in Medium-199 (M-199, Gibco). Other chemicals, i.e., potassium dihydrogen phosphate, sodium chloride, potassium chloride, sodium hydrogen phosphate, dimethyl sulfoxide, sodium dodecyl sulphate, HEPES, sodium bicarbonate, and 3-(4,5-dimetiltiazol-2-il)-2,5-difeniltetrazolium bromide (MTT) were purchased from Sigma-Aldrich. Fetal bovine serum, trypsin-EDTA 0.25%, and penicillin-streptomycin were purchased from Gibco, whereas Amphotericin B was purchased from Caisson. Phosphate-buffered saline (PBS) was obtained by mixing 0.2 g of KH2PO4, 8 g of NaCl, 0.2 g of KCl, 1.15 g of Na2HPO4, and 1 L of distilled water.
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4

Enumeration of Yeast and Acetic Acid Bacteria in Kombucha

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The total count of yeast cells in the kombucha tea was determined using the spread plate technique on yeast malt (YM) agar with the addition of chloramphenicol. Determination of the total count of acetic acid bacteria was performed on yeast peptone mannitol (YPM) agar with amphotericin B (CAISSON, USA). The plates were incubated at 30 °C, for at least 3 days [14 ].
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5

Adipose Tissue Isolation from Canines

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Three severely injured dogs (6–10 months) were presented at the outdoor clinic of the Faculty of Veterinary and Animal Science, PMAS-Arid Agriculture University, Rawalpindi, Pakistan. After proper examination and on advice of the registered hospital veterinarian, the dogs were euthanized for reasons unrelated to this study. Euthanasia followed the American Veterinary Medical Association (AVMA) guidelines for euthanasia of animals [44 ]. Briefly, a deep stage of anesthesia was achieved with intramuscular injection of xylazine HCL (1 mg/kg) and ketamine (5 mg/kg), in which cardiac arrest was induced by an intravenous injection of supersaturated solution of MgSO4 (1 mL/kg). After euthanasia, adipose tissue (~ 3–5 g) from the inguinal subcutaneous (SC), omental (OM), and perirenal (PR) region and from the infrapatellar fat pad (IPFP) were isolated as presented in Fig. 1A-D, and kept in Dulbecco phosphate buffer saline (DPBS−/−, i.e. without Ca++ and Mg++; Sigma-Aldrich, USA) with 5% penicillin (100 U/mL), streptomycin (100 μg/mL) and amphotericin-B (250 μg/mL, Caisson, USA) solution and transported to Stem Cell Physiology and Cytogenetic Laboratory at Faculty of Veterinary and Animal Sciences, PMAS-Arid Agriculture University, Rawalpindi, Pakistan. All experimental procedures were performed in strict accordance with the guidelines of the Institutional Animal Ethics Committee.
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6

Expansion and Activation of Isolated T Cells

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Isolated T cells were suspended at 106 cells/mL in RPMI 1640 media with L‐glutamine (Caisson Labs, Smithfield, UT, USA) supplemented with 10% fetal bovine serum (FBS; Sigma‐Aldrich), 1% (v/v) of penicillin/streptomycin solution, 2.5 μg/mL amphotericin B (Caisson Labs), 25 mM HEPES (Caisson Labs), 100 ng/mL Interleukin (IL)‐2 (PeproTech, Cranbury, NJ), and 25 μL/mL ImmunoCult™ CD3/CD28 T cell activator (StemCell Technologies). Cells were seeded (106 cells/well) in a non‐treated, flat‐bottom, 24‐well tissue culture plate (CellTreat, Pepperell, MA, USA) and incubated at 37°C with 5% CO2 for 3 days. On day 3, cells were collected from the plate, spun down by centrifugation at 250 × g for 10 min, re‐suspended in culture media without activator (0.25 × 106 cells/mL), and seeded in a new 24‐well plate (0.25 × 106 cells/well). Culture media supplemented with 100 ng/mL of IL‐2 was replaced every 3 days. When the total cell count for the sample reached 107, the cells were re‐suspended at a concentration of 106 cells/mL and culture continued in a 250 mL suspension culture flask (CellTreat, Pepperell, MA, USA). Total numbers of viable cells were determined using an automated cell counter with Trypan Blue (Countess II, ThermoFisher, Waltham, MA) before each media exchange.
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7

Culturing Human Cancer Cell Lines

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The human gastric cancer cell lines, AGS and NCI-N87 were purchased from Food Industry Research and Development Institute (Hsinchu, Taiwan). The human gastric cancer cell lines, HR and MKN45, and the duodenal cancer cell line AZ521 were provided by Prof. Chia-Jui Yen (Department of Medical Oncology, National Cheng Kung University Hospital, Tainan, Taiwan). The human leukemic monocyte lymphoma cell line U937 was a kind gift from Prof. Ming-Derg Lai (Department of Biochemistry and Molecular Biology, College of Medicine, National Cheng Kung University, Tainan, Taiwan). All the cell lines were maintained in RPMI-1640 medium (HyClone) supplemented with 10% fetal bovine serum (HyClone), 15 mM HEPES (Biological Industries), 2 mM L-glutamine (Caisson), and 1x antibiotic-antimycotic solution (1,000 units/L penicillin, 2.5 µg/L amphotericin B, and 1000 µg/L streptomycin) (Caisson) and were cultured at 37 °C in a humidified atmosphere containing 5% CO2 and 95% air.
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8

HOTAIR Knockdown in HeLa Cells

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HeLa cells were purchased from American Type Culture Collection (ATCC, USA) and cultured in DMEM/F12 1:1 medium (Gibco; Carlsbad, CA, USA) supplemented with 10% fetal bovine serum 100 U/mL penicillin, 100 μg/mL streptomycin and 0.25 μg/mL amphotericin B (Caisson Labs; Smithfield, UT, USA), at 37°C and 5% CO 2 . The cells (~500, 000 cells, 12-wells plates) were transfected with 30 µM of DsiRNA targeting HOTAIR (DsiHOTAIR) (IDT; San Diego, CA, USA) or as control DsiCTRL (IDT; San Diego, CA, USA) using Lipofectamine 2000 (Invitrogen; Carlsbad, CA, USA) according to the manufacturer's protocol, then collected 48 hours later for further analysis.
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