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5 protocols using mouse anti α tubulin

1

Western Blot Analysis of Cntn1 Protein

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The cell lysates were collected by lysing cells under RIPA buffer (50 mM Tris-HCl, pH 8.0, 150 mM NaCl, 1% NP-40, 0.5% sodium deoxycholate, 0.1% SDS) and mixed with protease inhibitor cocktail (Sigma-Aldrich) and phosphatase inhibitor cocktail (Roche). After removing the cell debris by centrifuging with 15000 rpm for 30 min at 4°C, proteins were quantified by BCA protein assay (Pierce). Next, electrophoresis was performed on 30% acrylamide/bis-acrylamide gradient gel (TOOLS biotechnology), and then transferred to a PVDF membrane (Millipore). After blocking, the following primary antibodies were used: mouse anti-Cntn1 (1:500, LSBio; 1:500, Proteintech, 13843-1-AP), mouse anti-α-Tubulin (1:1000, Proteintech). α-Tubulin was used as an internal control. Primary antibodies were detected through horseradish peroxidase (HRP)-conjugated secondary antibodies listed below: anti-mouse (1:10000, GeneTex), anti-rabbit (1:20000, Sigma-Aldrich). Signals were generated by ECL-Plus reagent (Millipore), and detected under Luminescence/Fluorescence Imaging System LAS-4000 (Fujifilm). Signal quantifications were performed under Image-J based analysis.
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2

Western Blot Analysis of AKT3 Protein

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Protein lysates obtained from the cells were subjected to SDS-PAGE and then the gel was transferred to Polyvinylidene difluoride (PVDF, Merck Millipore). The PVDF membranes were blocked with 5% non-fat dry milk and then the membranes were incubated with rabbit anti-AKT3 (1:200, Proteintech, USA) or mouse anti-α-tubulin (1:2000, Proteintech, USA) overnight at 4 °C. The next day, they were incubated with the appropriate secondary antibodies (HRP-conjugated anti-rabbit IgG (1:5000, CST, USA) or HRP-conjugated anti-mouse IgG (1:5000, CST,USA) and detected with a chemiluminescence imaging analysis system (Tanon, China).
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3

Western Blot Analysis of Neural Stem Cell Proteins

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The NSCs were lysed in RIPA (CWBIO, Beijing, China) lysis buffer, and the total proteins were fractionated by 8–15% SDS-PAGE (polyacrylamide gel electrophoresis). The membranes were blocked with 5% BSA. Before incubation with secondary antibody, membranes were incubated with the following primary antibodies: rabbit anti-RNF220 (Sigma-Aldrich, Cat# HPA027578), rabbit anti-ZC4H2 (Sigma-Aldrich, Cat# HPA049584), mouse anti-Sin3B (Santa Cruz, Cat# sc-13145), rabbit anti-Cend1 (Abcam, Cat# ab113076), rabbit anti-Neurogenin1 (Abcam, Cat# ab66498), mouse anti-p53 (Abcam, Cat# ab26), rabbit anti-Hes1 (Abcam, Cat# ab108937), rabbit anti-Notch1 (Abcam, Cat# ab52627), mouse anti-Six3 (Rockland, Cat# 35944), mouse anti-Neuritin (Santa Cruz, Cat# sc-365538), rabbit anti-Ascl1 (BD Pharmingen, Cat# 556604), rabbit anti-CyclinD1 (Cell Signaling Technology, Danvers, MA, USA, Cat# 2922S), mouse anti-CyclinB1 (Cell Signaling Technology, Cat# 4135S), rabbit anti-P21 (Abcam, Cat# ab109199), and mouse anti-α-tubulin (ProteinTech, Rosemont, IL, USA, Cat# 11224-1-AP). Band intensities were quantified using ImageJ software and normalized to α-tubulin.
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4

Co-Immunoprecipitation Assay for Protein Interactions

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For Co-IP assays, HEK-293T cells were transfected as indicated: 36 h later, cells were lysed in IP buffer (1% Triton X-100, 150 mM NaCl, and 50 mM Tris/HCl (pH 7.5), 1 mM PMSF, and protease inhibitor cocktail) and incubated with anti-Flag M2 affinity gels for 4 h at 4 °C. For reverse IP, HEK-293T cells were lysed and incubated with anti-HA antibody and protein A/G agarose for 12 h at 4 °C. Agarose was washed five times with IP assay buffer, boiled in SDS sample buffer, and subjected to Western blot analysis. Western blotting and immunofluorescence (IF) were performed as previously [40 (link)].
The following antibodies were used: mouse anti-Flag (F3165, Sigma-Aldrich), rabbit anti-Flag (F7425, Sigma-Aldrich), rabbit anti-GST (2622, Cell Signaling Technology), mouse anti-β-actin (66009-1-Ig, Proteintech), rabbit anti-Snail (3879, Cell Signaling Technology), mouse anti-Snail (sc-271977, Santa Cruz), rabbit anti-p66β (ab76925, Abcam), anti-biotin, HRP-linked (7075, Cell Signaling Technology), and rabbit anti-IgG (2729, Cell Signaling Technology), mouse anti-α-tubulin (66031-1-Ig, Proteintech), rabbit anti-Fibronectin1 (15613-1-AP, Proteintech), rabbit anti-E-cadherin (20874-1-AP, Proteintech), rabbit anti-Vimentin (10366-1-AP, Proteintech).
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5

Immunofluorescence of P. gingivalis in BMDMs

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ASC antibody (1:200, Abcam, ab155970, UK) was used for immunofluorescence in P. gingivalis-treated BMDMs (MOI = 50), with or without pretreatment of OTTSP167 or Compound 50 for 2 h. Mouse acet-tubulin antibody (1:500, Proteintech, 66,200-1-Ig, China) and mouse anti-α-tubulin (1:500, Proteintech, 66,031-1-Ig, China) were used for staining the structure of microtubuli. The color reactions of images were captured on the confocal microscopy (Nikon A1, Japan).
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