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71 protocols using actin tracker green

1

Visualizing Actin Cytoskeleton Dynamics with LIPUS

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F-actin cytoskeletal staining was performed using the fluorescent dye Actin-Tracker Green (Beyotime, China). HUVECs were seeded on confocal dish (NEST, China) at a density of 2 × 104 cells/well. Subsequently, BTO nanoparticles were added for incubation, during which LIPUS treatment (1 min) was performed twice. After culturing for 48 h, the cells were washed with PBS, and then fixed with 4% paraformaldehyde (Biosharp, China) for 10 min. After washed with PBS containing 0.1% Triton X-100 (Sigma Aldrich, USA), the samples were sequentially stained with Actin-Tracker Green (1:200 in PBS solution, 1 h) solution and 4′,6-diamidino-2-phenylindole (3min; DAPI, Beyotime, China) solution for F-actin cytoskeleton and cell nucleus visualization respectively. Then the stained samples were observed by a confocal laser scanning microscope (CLSM, TCS SP8, Leica, Germany).
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2

Immunofluorescence Staining of Airway Smooth Muscle Cells

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Human airway smooth muscle cells were fixed with 4% paraformaldehyde for 15 minutes and then permeabilized with 0.3% Triton X‐100 for 10 minutes. After blocking for 1 hour in 5% goat serum, cells were incubated with primary antibodies overnight at 4°C and followed by fluorescent‐conjugated anti‐human secondary antibody for 1 hour at room temperature in the next day.
Actin‐Tracker Green (Beyotime Biotech) was used to stain actin filaments, and DAPI (Beyotime Biotech) was used for cell nuclei. Photographs were taken by a fluorescence inverted/laser scanning confocal microscope (Leica Imaging Systems).
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3

Exosome Labeling and Uptake in BMSCs

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Exosomes were labeled using DiD (Beyotime, China) fluorescent agent for 30 min. Excess dye was removed by ultracentrifugation as the methods mentioned above. The labeled exosomes were incubated with the BMSCs for 6 h. After that, cells were fixed and stained with Actin-Tracker Green (Beyotime, China) and DAPI. The uptake of labeled exosomes by BMSCs was obtained using confocal laser scanning microscope (CLSM, Olympus FV3000).
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4

Fluorescent Staining of Actin and Nuclei

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Cells were washed with PBS, fixed with 4% paraformaldehyde for 10 min, and then permeabilized with 0.1% Triton X-100 for 10 min. Cells were incubated with Actin-Tracker Green (Beyotime, Shanghai, China) at room temperature for 1 hour. Then, the nuclei of cells were stained with Hoechst33342 and cells were subsequently visualized under a fluorescence microscope (Olympus BX51, USA). Adobe Photoshop CS6 (Adobe Systems, USA) was used to prepare merged images.
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5

Labeling and Uptake of M2-Exosomes in hPDLCs

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M2‐exos were labeled with fluorescent 3,3′‐dioctadecyloxacarbocyanine perchlorate (DiD; Invitrogen) according to the manufacturer's recommendations. Briefly, purified M2‐exos were incubated in 5 × 10−6m DiD for 15 min at 37 °C and were then ultracentrifuged at 100 000 g for 90 min to remove unbound dye. After being washed twice in PBS with centrifugation at 100 000 g, the labeled exosomes were resuspended in PBS before use. hPDLCs seeded on 24‐well plates were incubated at 37 °C with DiD‐labeled M2‐exos. Uptake was stopped after 4 h by washing. Then, the cells were fixed in 4% paraformaldehyde (PFA) for 30 min and permeabilized in 0.5% Triton‐X (Beyotime Biotechnology) in PBS for 15 min. Samples were stained sequentially with Actin‐Tracker Green (Beyotime Biotechnology) for 30 min and 4′,6‐diamidino‐2‐phenylindole (Beyotime Biotechnology) for 5 min at room temperature.
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6

EGCG-Mediated Autophagy Regulation in Cells

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EGCG (≥98% purity), 3-MA and 4′,6-diamidino-2-phenylindole (DAPI), MDC, and MTT were provided by Sigma (St. Louis, MO, USA). EGCG was dissolved in deionized water to prepare 10 mM stock solutions at −20 °C. Dulbecco’s modified Eagle’s medium (DMEM), OPTI-MEM I medium and fetal bovine serum (FBS) were purchased from Gibco (Grand Island, NY, USA). AFP and LC3 mouse monoclonal antibody were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Anti-β-actin was obtained from Sigma-Aldrich (St. Louis, MO, USA). Horseradish peroxidase-conjugated anti-rabbit or anti-mouse secondary antibodies were purchased from Wuhan Boster Biological Engineering Co. (Wuhan, China). Cy3-labeled anti-mouse antibody, Actin-Tracker Green, Mitochondrial Membrane Potential Assay Kit with JC-1 and the BCA Protein Assay Kit were purchased from Beyotime Institute of Biotechnology (Beijing, China).
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7

Actin Visualization and Quantification

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Actin-Tracker Green (Beyotime, Shanghai, China, C1033) was diluted with Immunol Fluorescence Staining Secondary Antibody Dilution Buffer (Beyotime, Shanghai, China, P0108) to 1:100. Approximately 5 × 10 3 cells were seeded in glass-bottom cell culture dishes (NEST, Wuxi, China, 801001), then xed with 4% paraformaldehyde for 30 min and incubated in diluted Actin-Tracker Green for 1 h at 25℃ in the dark. After washing with PBS three times, the dish was incubated with Antifade Mounting Medium with DAPI (Beyotime, Shanghai, China, P0131). Actin viability with different drug treatments was determined using uorescence microscopy.
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8

Osteoclastogenesis Inhibition by Flavonoid Compounds

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Recombinant RANKL and M-CSF were purchased from PeproTech (Princeton, NJ, United States). Icariside I (ICS; C27H30O11; MW: 530.53), baohuoside Ⅰ (BS; C27H30O10; MW: 512.52), icariin (ICA; C33H40O15; MW: 676.68), icaritin (ICT; C21H20O6; MW: 368.38), and a Cell Counting Kit-8 (CCK-8) were purchased from Target Molecule Corp. (Boston, MA, United States). Trypsin-EDTA (0.05%), PBS, FBS, and MEM-Alpha basic were purchased from Gibco. Antibodies against p38 (#8690), p-p38 (#4511), ERK (#9102), p-ERK (#4370), JNK (#9252), p-JNK (#4668), p65 (#8242), p-p65 (#3033), IκBα (#4812), p-IκBα (#2859), and RANK (#4845) were purchased from Cell Signaling Technology (Boston, MA, United States). Antibodies against TRAP (ab52750) and cathepsin K (ab19027) were purchased from Abcam (Cambridge, MA, United States). Antibodies against NFATc1 (66963-1-Ig), uPAR (10286-1-AP), and β-actin (66009-1-Ig) were purchased from Proteintech Group Inc. (Wuhan, China). DAPI and Actin-Tracker Green were obtained from Beyotime (Shanghai, China). Cy3-labelled goat anti-rabbit antibody was purchased from Boster (Wuhan, China). Unless noted otherwise, other reagents were of the highest purity available and were obtained from Sigma-Aldrich (St. Louis, MO, United States).
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9

Visualizing exomiR-34a Uptake in Cancer Cells

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The distribution of exomiR-34a in cancer cells was measured using confocal microscopy. Briefly, Panc28 and Miapaca-2 cells (1.5 × 105) were seeded in a confocal dish and certain amounts of exomiR-34a were added and incubated for 24 h. Cells were then fixed with 4% methanol-free paraformaldehyde. After incubation for 10 min, the cells were stained with Actin-Tracker Green (Beyotime, China) and DAPI (Solarbio, China). Confocal microscopy was used to observe the distribution of the exomiR-34a.
The transfection efficiency was determined using the flow cytometry approach. Briefly, Panc28 and Miapaca-2 cells (2 × 105) were plated in six-well plates and treated without or with a certain amount of exomiR-34a for 24 h. Cells were collected by centrifugation at 1000 × g for 10 min and analyzed with a flow cytometer (Becton, Dickinson and Company, USA). Transfection efficiency was indicated by the proportion of cy3-positive cells.
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10

Bioactive Hydrogels and Ultrasound for BMSC Culture

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There are six groups: GO (GO hydrogel), GO + US (GO hydrogel and ultrasound cavitation), 0.1KBGO (0.1KBGO hydrogel), 0.1KBGO + US (0.1KBGO hydrogel and ultrasound cavitation), 0.5KBGO (0.5KBGO hydrogel), and 0.5KBGO + US (0.5KBGO hydrogel and ultrasound cavitation). The GO, 0.1KBGO, and 0.5KBGO hydrogels were added to 48-well plates. Then BMSCs were seeded in each well at a density of 2 × 104. After that, the US groups received ultrasonic loading with a sound intensity of 1.5 W/cm2 for 5 min per day, while other groups were left untreated. After 48 h, a Calcein-AM/PI Live/Dead assay kit (BB-4126, Bestbio, China) was used to monitor the viability of the seeded BMSCs under a CLSM. After 1, 4, and 7 days, a Cell Counting Kit-8 (CCK-8; Dojindo, Kumamoto, Japan) was applied to evaluate the proliferation of BMSCs on different hydrogels, and the optical density (OD) was detected by a microplate spectrophotometer (Epoch2, BioTek, USA) at 450 nm. And the cell nuclei and cytoskeleton of BMSCs were stained by DAPI staining solution (C1006, Beyotime, China) and actin-tracker green (C2201S, Beyotime, China) and then visualized by a CLSM to evaluate the cell spreading and adhesion after being cultured for 48 h.
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