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P nitrophenyl substrate

Manufactured by Merck Group
Sourced in United States

P-nitrophenyl substrates are a class of chemical compounds used in biochemical and analytical applications. They contain a p-nitrophenyl moiety that serves as a chromogenic or fluorogenic reporter group, allowing for the detection and quantification of enzymatic activities.

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5 protocols using p nitrophenyl substrate

1

Synthesis of Nitrophenyl Substrates

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p-nitrophenyl substrates were from Sigma-Aldrich. Compounds 121 (Fig 2) were synthesized as described previously.[34 (link)–36 (link), 40 (link)]
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2

Characterization of Manno-oligosaccharides and Plant Polysaccharides

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Mannobiose (M2), mannotriose (M3) and mannotetraose (M4) were purchased from Megazyme (Bray, Ireland). Locust bean gum (LBG), solka floc, glucose, mannose, guar gum, p-nitrophenyl-substrates, p-nitrophenol and other chemicals were procured from Sigma-Aldrich, USA. Yeast extract, peptone, urea and ammonium sulphate were procured from Hi-Media, India. The palm kernel cake was purchased from M/s Meh Impex, Chennai, India. Food grade konjac gum (glucomannan) was obtained from New Foods, Illinois, USA. Fenugreek seed meal (seed meal of Trigonella foenum-graecum), wheat bran and wheat straw were purchased from local market.
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3

Synthesis of Nitrophenyl Compounds

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p-nitrophenyl substrates were from Sigma-Aldrich. Compounds 117 were synthesized as described previously [13] (link), [14] (link), [15] (link), [16] (link).
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4

Quantifying Mouse IgG in Ascites Fluids

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To evaluate the total mouse IgG concentration in the ascites fluids (AF) samples, ELISA plates (MAxisorp, Nunc) were coated with 120 ng (50 µl) goat anti-mouse IgG, F(ab′)2 fragment specific in coating buffer (50 mM Na2CO3, pH 9.6) and incubated overnight at 4°C. Plates were then washed in PBST buffer and blocked for 1 hr at 37°C with 200 µl per well of 2% (W/V) BSA in Tris-NaCl pH 7.6 (TSTA). Following blocking and washing, plates were incubated with serial dilutions (50 µl, in duplicate) of the AF samples in TSTA (50 µl/well, in duplicate) for 1 hr at 37°C. After washing with PBST, plates were incubated with 30 ng (50 µl) alkaline phosphatase-conjugated donkey anti-mouse IgG diluted in TSTA for 1 hr at 37°C. Finally, plates were washed with PBST, and the color reaction was developed using p-Nitrophenyl substrate (Sigma). Absorbance was measured at 405 nm with Molecular Devices Spectramax M3 reader. The IgG concentration was determined by interpolation from a 1.56–100 ng/ml standard curve (fitted to four-parameter equation) of ChromPure mouse IgG whole molecule, by SoftMax Pro software. IgG concentration of all MAbs is presented in Table S1.
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5

Honey Enzymatic Activity Analysis

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The activity of two glycolytic enzymes: α-glucosidase and β-galactosidase, using the method described by Dżugan et al. [42 ] was tested for honey samples. The reaction mixture contained 25 μL of 2 mM appropriate p-nitrophenyl substrate (Sigma Aldrich, USA) in 0.2 M citrate buffer (pH 5.5 for α-GLU and 4.0 for β-GAL) and 25 μL of honey aqueous solution (20% w/w) sample. In blank, 25 μL of suitable buffer was used instead of substrate solution. Samples were incubated at 37 °C for 90 min, and the reaction was then stopped by the addition of 250 μL of 0.5 M carbonate buffer at pH 10.5. Absorbance was measured on an ELISA reader (Clindiag Systems, Belgium) at a wavelength of 400 nm. Results were expressed as enzymatic units U/kg (μmol/min/kg) by multiplying the measured absorbance by a factor of 52.91.
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