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26 protocols using gp91phox

1

Western Blot Analysis of Myotube Proteins

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Total protein lysates were prepared from differentiated myotubes by homogenizing them in a lysis buffer containing 20mM Tris-HCl (pH 7,5), 1% Triton X-100, 1mM EDTA, 1mM EGTA, 20mM NaF, 1mM Na2P2O7, 10% glycerol, 150mM NaCl, 10mM Na3VO4, 1mM PMSF and protease inhibitors (Complete™, Roche Applied Science). Proteins were separated using SDS-PAGE and transferred to PVDF membranes. The following primary antibodies and their dilutions were used: gp91phox (1:1000; Santa Cruz Biotechnology); p-p65 (Ser536; 1:2000; Cell Signaling), p65 (total; 1:2000; Cell Signaling), IκBα (1:1000; Cell Signaling), and GAPDH (1:2000; Cell Signaling) The protein bands in the blots were visualized using either HRP secondary antibodies and autoradiography films or quantified with Odyssey Imaging System (Li-COR Biosciences).
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2

Investigating Protein Regulation in Cardiovascular Cells

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Total protein was separated from hearts or cells, separated by SDS‐PAGE, and transferred to PVDF membranes. After being blocked with 5% non‐fat dry milk at room temperature (RT) for 2 hours, the protein was incubated with antibodies against Cleaved caspase‐3 (1:1000), caspase‐3 (1:1000), Bcl‐2 (1:1000), Bax (1:1000), gp91phox (1:500), Cyt‐Cyto C (1:1000), NQO1 (1:1000), Nrf2 (1:1000), Sirt1 (1:1000), Ac‐Foxo1 (1:500), Foxo1 (1:1000), PI3K (1:1000), p‐Akt (1:1000), Akt (1:1000) and β‐actin (1:1000) at 4°C for 14 hours. After washed with TBST buffer (50 mmol\L Tris‐HCl, 150 mmol\L NaCl, 0.1% Tween 20, pH 7.6) for three times, the membranes were incubated with horseradish peroxidase‐conjugated secondary antibodies (1:5000) at room temperature for 2 hours. Immunocomplexes were detected with an enhanced chemiluminescent protein detection kit, and bands were quantified by scanning densitometry with an image analyzer (BandScan, USA). Primary antibodies against Sirt1, PI3K, p‐Akt, Akt, Cleaved caspase‐3, caspase‐3, Bcl‐2 and Bax were from Cell Signaling Technology (Boston, MA, USA); antibodies against gp91phox and β‐actin were from Santa Cruz Biotechnology; Ac‐Foxo1 and Foxo1 were from Medchem Express (NJ, USA). Secondary antibodies, including rabbit anti‐goat, goat anti‐mouse and goat anti‐rabbit antibodies, were from Zhongshan Co. (Beijing).
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3

Western Blot Analysis of NADPH Oxidase

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Whole-cell extracts were prepared using a low-salt lysis buffer extracts (150 mM NaCl and 0.1% NP-40) as previously described (Pardo et al., 2010). Samples were separated by PAGE (NuPAGE Bis-Tris gels; Life Technologies) and analyzed by Western blotting. The following antibodies were used: gp91phox (sc-130543; Santa Cruz Biotechnology, Inc.), p22phox (sc-20781; Santa Cruz Biotechnology, Inc.), β-actin (Abcam, ab75186), and Rac1/2/3 (PA5-17159; Thermo Fisher Scientific). Blots were developed using ECL Prime reagents (GE Healthcare) and Lumigen TMA-6. Lysis in RIPA buffer produced similar results.
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4

High-Salt Diet and Hydrogen Sulfide Regulation

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High-salt (HS) feed containing 8% sodium chloride (NaCl) was purchased from Beijing Keao Xieli Feed Company (Beijing, China), taurine was purchased from Beijing Puboxin Biotechnology Company (Beijing, China), and horseradish peroxidase-labeled secondary antibodies, NaHS, and the CBS inhibitor hydroxylamine hydrochloride (HA) were purchased from Sigma-Aldrich (St. Louis, MO, USA) [30 (link)]. Antibodies against CBS , MPST, gp91phox, p47phox, p22phox and CD31 were purchased from Santa Cruz (Dallas, TX, USA); CSE antibody was purchased from Sigma-Aldrich; antibodies against CSAD, CDO1, CD31 and renin were purchased from Abcam (Waltham, MA, USA); β-actin antibody was purchased from Beijing Zhongshan Golden Bridge Biotechnology Co., Ltd. (Beijing, China); GAPDH antibody was from Shanghai Kangcheng Biological Engineering Company (Shanghai, China), and antibodies against SOD1 and SOD2 were purchased from Enzo Life (Farmingdale, NY, USA).
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5

Immunoprecipitation of α-synuclein with gp91phox

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Flag-fused α-Syn peptides (ABI Scientific Inc., Sterling, VA) and cell lysates, which were collected from WT or gp91phox−/− mixed glial cultures or enriched microglia by using IP lysis buffer (Thermo Scientific, Waltham, MA), were mixed in a cold room overnight in the presence of protease inhibitor cocktail (Thermo Scientific, Waltham, MA). Simultaneously, goat anti-gp91phox polyclonal antibodies (Santa Cruz Biotech., Dallas, TX) or control IgGs were conjugated to protein G magnetic beads using a Dynabeads protein G immunoprecipitation kit (Life Technologies, Grand Island, NY) at RT for 10 min. Next, the α-Syn peptides and cell lysate mixtures were incubated with the antibody- or control IgG-conjugated protein G magnetic beads at RT for 30 min. After washing, the beads were boiled in Laemmli sample buffer and the supernatants were resolved using SDS-PAGE. The proteins were transferred to Nitrocellulose membranes (0.2 μm, Bio-Rad Laboratories Inc., Redmond, WA) and immunoblotted using mouse antibodies against Flag (Origene, Rockville, MD), gp91phox (Santa Cruz Biotech. Dallas, TX), or tubulin (Abcam, Cambridge, MA).
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6

Investigating Cellular Signaling Pathways

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AMPK (catalog no. sc-25792), ANP (catalog no. sc-515701), CPT1 (catalog no. sc-31128), G0S2 (catalog no. sc-133423), MMP2 (catalog no. sc-13595), MMP9 (catalog no. sc-393859), p47-phox (catalog no. sc-74514), gp91-phox (catalog no. sc-74514), PGC1α (catalog no. sc-518025), PPARα (catalog no. sc-398394), VEGF-A (catalog no. sc-7269), and β-actin (catalog no. sc-47778) antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). AKT (catalog no. 2938), phosphorylated AKT at Ser473 (pAKT[Ser473]; catalog no. 9271), pAKT at Thr308 (pAKT[Thr308]; catalog no. 9275), ATGL (catalog no. 2138), and phosphorylated AMPK at Thr172 (pAMPK; catalog no. 2531) antibodies were obtained from Cell Signaling Technology (Hartsfordshire, UK). Glyceraldehyde 3-phosphate dehydrogenase (GAPDH; catalog no. MAB374) and HIF1α (catalog no. MAB5382) antibodies were obtained from Merck (Darmstadt, Germany). The other chemicals were purchased from Sigma (St. Louis, MO, USA) unless otherwise specified.
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7

Cardiomyocyte Protein Expression Analysis

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Cardiomyocytes were lysed with 1x RIPA lysis buffer (Cell Signalling Technology, USA). After centrifugation, the lysates were clarified, and the supernatants fractions were isolated. Protein concentrations in cells were defined by the BCA protein assay. Approximately 30–50 μg of protein was loaded and separated by SDS-PAGE gels and then transferred to a PVDF membrane. After blocking the membrane with 5% nonfat milk, the following primary antibodies were used for western blot: Bcl-2, Bax, Akt, GSK-3β, phospho-Akt (Ser473), phospho-GSK-3β (Ser9) (Cell Signalling Technology, USA), gp91phox, p47phox, and β-actin (Santa Cruz Biotechnology, USA). Then the membrane was probed with appropriate secondary antibodies. Finally, the blots were visualized using a chemiluminescence system (Pierce Biosciences, USA). Image analysis software (GeneTools from SynGene) was used to quantify the immunoblots.
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8

Protein Expression Analysis by Western Blot

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Primary anti-NF-κB p65, gp91phox, Na-K-ATPase, β-actin, and histone H3 antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Phospho-NF-κB p65 (Ser536) was obtained from Cell Signaling Technology (Danvers, MA, USA). Western blotting was performed on the cell, membrane protein, and nuclear extracts as described previously [16 (link)]. β-Actin was used as the control for whole cell extract proteins, histone H3 for nuclear proteins, and Na-K-ATPase for the membrane proteins.
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9

Investigating Inflammatory Signaling Pathways

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Primary antibodies for inducible nitric oxide synthase (iNOS) (#7271), TNFα (#1350), heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) (#32301), IL-6 (#1265), TLR4 (#30002), p47phox (#7660), gp91phox (#5827), NOX4 (#21860) and β-actin (#47778), and secondary antibodies rabbit anti-goat IgG-HRP (#2768), mouse anti-rabbit IgG-HRP (#2357), and goat anti-mouse IgG-HRP (#2005) were from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The primary and secondary antibodies for IκB kinase α/β (IKKα/β) (#11930), p-IKKα/β (Ser176/180) (#2697), inhibitor of κBα (IκBα) (#4814), p-IkBα (Ser32) (#2859), NF-κB p65 (#8242) and p-NF-κB p65 (Ser536) (#3033) were from Cell Signaling Technology (Boston, MA, USA). The primary antibody for rat CD 68, clone ED1 (MCA341R) was from Bio­Rad Laboratories Inc. (Hercules, CA, USA). (−)-Epicatechin, LPS from Escherichia coli serotype 0127: B8, NADPH, 2-thiobarbituric acid, N,N′-dimethyl-9,9′-biacridinium dinitrate (lucigenin), and superoxide dismutase (SOD) were from Sigma Chemical Co. (St. Louis, MO, USA).
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10

Western Blot Analysis of NADPH Oxidase

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Aortas were homogenized and lysed. Proteins (50–75 μg) were separated on 12 or 14% SDS-PAGE electrophoresis gel, transferred to nitrocellulose membrane then probed with antibodies to p22phox, p47phox, gp91phox, p67phox, SOD1, or SOD2 (Santa Cruz Biotechnology, INC). A monoclonal anti-α-tubulin antibody (1 : 5000, Sigma-Aldrich) was used to check protein gel loading and to normalize protein expression. Immunoreactive bands were revealed with a secondary peroxidase-conjugated anti-mouse or anti-rabbit IgG (1 : 5000, Beckman Coulter), detected by enhanced chemiluminescence system (ECL Plus, Amersham Biosciences) and quantified by densitometry.
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