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Model ub 1800

Manufactured by Shimadzu
Sourced in Japan

The Shimadzu Model UB-1800 is a UV-Vis spectrophotometer designed for general laboratory applications. It features a wavelength range of 190 to 1100 nm and provides accurate absorbance measurements.

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11 protocols using model ub 1800

1

Proline Estimation in Leaf Samples

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The proline estimation was performed according to the protocol of Hanson et al. [39 (link)]. The fresh leaf samples of 0.3 g were ground in 10 ml of sulphosalicylic acid (30% aqueous). The mixture was centrifuged at 9000 ×g for 15 min and, thereafter, 2 ml of supernatant was taken in another glass tube. An equal volume of acid ninhydrin and acetic acid were added in the above step and incubated for 1 h in boiling water. The reaction was stopped by putting it into the ice bath. The mixture was taken out from the ice bath and 4 ml of toluene was added and vortexed for 20 s. The upper phase was taken for the estimation of the proline using the spectrophotometer at 520 nm (Model UB-1800, Shimadzu, Japan).
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2

Quantifying Lipid Peroxidation in Plant Leaves

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TBARS content was determined in the leaves using the method developed by Cakmak and Horst [62 (link)] with minor modification. The fresh leaf samples (0.5 g) were ground in 5 ml of 0.1% (w/v) trichloroacetic acid (TCA). The centrifugation was performed for 5 min at 12,000 ×g for supernatant collection. The supernatant was taken from the above step, and 1 ml of it was added to 4 ml of 0.5% (w/v) TBA in 20% (w/v) TCA. The mixture was placed for 30 min at 90°C in water bath, and thereafter, the reaction was terminated in an ice bath. The centrifugation was performed for 5 min at 10,000 ×g for supernatant collection. The absorbance of the supernatant was read at 532 and 600 nm wavelengths on a spectrophotometer (Model UB-1800, Shimadzu, Japan). The TBARS content was calculated using the following formula:
TBARSnmolg1fw=A532A600×V×1000155extinction  coefficient×W, where A532 = absorbance at 532 nm, A600 = absorbance at 600 nm, V = extraction volume, and W = fresh weight of tissue.
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3

Proline Estimation in Plant Leaves

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Fresh leaves (0.2 g) were used for the estimation of proline using the method established by Hanson et al. [76 (link)]. The fresh samples were ground in 5 mL, 3% aqueous sulphosalicylic acid. The samples were centrifuged at 9000× g for 10 min and supernatants (2 mL) were taken in another tube. An amount of 2 mL of each (acid ninhydrin and acetic acid) was added in the above mixture. The samples were incubated in boiling water for 1 h, and the reaction was terminated by putting the samples in an ice bath. Toluene (4 mL) was added in the above samples and they were vortexed. The aqueous phase was separated from chromatophore-containing toluene. The proline content was estimated in samples by taking absorbance of chromatophore containing toluene at 520 nm (Model UB-1800, Shimadzu, Japan). The unit of proline content was expressed in μg/g FW.
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4

Chlorophyll Quantification in Leaf Samples

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Total chlorophyll was estimated in the fresh leaves according to the method of Arnon [40 (link)]. Leaves were chopped in small pieces (0.1 g) and 10 ml of dimethyl sulfoxide (DMSO) was added to each test tube. The incubation was completed at 65°C in oven for 120 minutes to release the whole chlorophyll in DMSO. The tubes were taken out from the oven and absorbance of the solution was recorded at 663 and 645 nm on a UV-vis spectrophotometer (Model UB-1800, Shimadzu, Japan). The content of chlorophyll was calculated as mg/g fresh weight.
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5

Catalase Activity Determination by H2O2 Degradation

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The CAT activity was determined by estimating H2O2 degradation according to the method of Aebi [42 (link)]. The reaction was performed in 3.0 ml of reaction mixture containing 10 mMH2O2, 100 mM potassium phosphate buffer solution (pH 7.0), and 100 µl of enzyme extract. The decrease in absorbance of H2O2 was recorded at 240 nm using the UV-vis spectrophotometer (Model UB-1800, Shimadzu, Japan). The enzyme activity was calculated using the extinction coefficient (0.036 mM−1 cm−1). One unit of CAT determines the amount necessary to decompose 1 µmol of H2O2 per min at 25°C.
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6

Thiobarbituric Acid Reactive Substances Assay

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The TBARS content was estimated in fresh leaves using the method described by Cakmak and Horst [43 (link)]. 0.5 g of fresh leaves was ground in 5.0 ml of 0.1% (w/v) trichloroacetic acid (TCA) at 4°C. The reaction mixture was taken in falcon tube and centrifuged at 12,000 ×g for 5 min. The 4.0 ml of 0.5% (w/v) TBA in 20% (w/v) TCA was added in 1.0 ml of supernatant taken from the above step. The mixture was kept for 30 min at 90°C in water bath. After incubation of mixture, the reaction was terminated by keeping it on ice bath. The reaction mixture was centrifuged at 10,000 ×g for 5 min, and absorbance of the supernatant was taken at 532 and 600 nm on a spectrophotometer (Model UB-1800, Shimadzu, Japan).
The amount of TBARS was calculated using an extinction coefficient of 155 mM cm−1 as follows: TBARSnmol g1 fw=A532A600×V×1000155extinction  coff.×W, where


A532 is absorbance at 532 nm


A600 is absorbance at 600 nm


V is extraction volume


W is fresh weight of tissues and methods.

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7

Chlorophyll Estimation in Plant Leaves

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Total chlorophyll was estimated according to the Arnon method [59 (link)]. The leaves were separated and washed with DDW; 0.1 g of chopped leaves was placed in the test tubes for each treatment, and 10 ml of DMSO was added to each test tube. The tubes were kept in an oven at 65°C. After 120 minutes, the tubes were taken out and the absorbance of the solution was recorded immediately at 663 nm and 645 nm on a UV-vis spectrophotometer (Model UB-1800, Shimadzu, Japan). The pigment concentration was calculated in μg/ml for treated and untreated samples.
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8

Measuring Superoxide Dismutase Activity

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The activity of superoxide dismutase (EC 1.15.1.1) was measured according to the method developed by Dhindsa et al. [60 (link)]. A fresh sample (0.05 g) was homogenized in 2 ml of extraction mixture containing phosphate buffer (0.5 M, pH 7.3), 0.3 mM-EDTA, 1% Triton × 100 (w/v), and 1% PVP (w/v). The mixture was centrifuged for 10 min at 4°C at 10,000 ×g. The supernatant was taken after centrifugation for the assay of SOD activity. The assay mixture, consisting of 1.5 ml reaction buffer, 0.2 ml of methionine, 0.1 ml of each (1 M-NaCO3, 2.25 mM-NBT solution, 3 mM-EDTA, riboflavin, and enzyme extract), and 1 ml of DDW, was incubated under the light. The blank mixture containing all substances was kept in the dark. Absorbance of samples along with the blank mixture was read at 560 nm using the UV-vis spectrophotometer (Model UB-1800, Shimadzu, Japan). A 50% reduction in color was considered as one enzyme unit (EU). The activity of SOD was calculated in EU (mg−1 protein min−1).
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9

Proline Quantification in Plant Leaves

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The proline was estimated using the method developed by Hanson et al. [58 (link)]. Fresh leaves (0.3 g) were ground in 10 ml of aqueous sulphosalicylic acid (3%). The mixture was centrifuged for 15 min at 9000 ×g. The supernatant (2 ml) from the above step was taken and mixed with an equal volume of acid ninhydrin (1.25 g ninhydrin in 30 ml acetic acid and 20 ml of 6 N H3PO4) and acetic acid. The mixture was placed for 1 h in boiling water for incubation. After incubation, the mixture was taken out from the boiling water and immediately placed in an ice bath. 4 ml of toluene was added in the mixture (4 ml) after taking it from the ice water bath. The mixture was vortexed, and chromatophore-containing toluene was separated from the aqueous phase. The absorbance was taken at 520 nm (Model UB-1800, Shimadzu, Japan) to determine proline content.
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10

Superoxide Dismutase Activity Assay

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The superoxide dismutase (SOD) activity was measured using the method reported by Dhindsa et al. [24 (link)]. The fresh leaf samples (0.25 g) were ground in 2 mL of phosphate buffer containing 1% Triton ×100 (w/v), 0.3 mM EDTA, and 1% PVP (w/v). The sample was centrifuged at 10,000 × g for 10 min, after which the supernatant was collected for assaying SOD activity. The enzyme assay was performed in 1.5 mL of reaction buffer containing 0.2 mL of methionine and 0.1 mL of each of 1 M NaCO3, 2.25 mM NBT solution, riboflavin, 3 mM EDTA, enzyme extract, and 1 mL of DDW incubated in the light. The blank was kept in the dark while containing all components as in the treated samples. The sample absorbance along with the blank was recorded at 560 nm using a UV-Vis spectrophotometer (Model UB-1800; Shimadzu, Japan). A 50% reduction in color was considered one enzyme unit (EU), and activity of SOD was calculated in mg−1 protein min−1.
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